RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 Q8N9P0 234 aaPredicted RBP3.53□□□□□ -1.84
VCAN-207ENST00000507162 OSTCQ9NRP0 149 aa3.53□□□□□ -1.84
VCAN-207ENST00000507162 IGLV5-45A0A087WSX0 123 aa3.52□□□□□ -1.85
VCAN-207ENST00000507162 KANTRA0A1W2PQU2 76 aa3.52□□□□□ -1.85
VCAN-207ENST00000507162 PMVKQ15126 192 aa3.52□□□□□ -1.85
VCAN-207ENST00000507162 MRPL54Q6P161 138 aaKnown RBP3.52□□□□□ -1.85
VCAN-207ENST00000507162 PCP2Q8IVA1 136 aa3.52□□□□□ -1.85
VCAN-207ENST00000507162 ORMDL3Q8N138 153 aa3.52□□□□□ -1.85
VCAN-207ENST00000507162 OBSCN-AS1Q96MR7 158 aa3.52□□□□□ -1.85
VCAN-207ENST00000507162 A6NN06 94 aa3.51□□□□□ -1.85
VCAN-207ENST00000507162 SMLR1H3BR10 107 aa3.51□□□□□ -1.85
VCAN-207ENST00000507162 H3BRM9 83 aa3.51□□□□□ -1.85
VCAN-207ENST00000507162 RPL23P62829 140 aaKnown RBP3.51□□□□□ -1.85
VCAN-207ENST00000507162 CD164Q04900 197 aa3.51□□□□□ -1.85
VCAN-207ENST00000507162 FAM74A3Q4VXF1 159 aa3.51□□□□□ -1.85
VCAN-207ENST00000507162 ORMDL2Q53FV1 153 aa3.51□□□□□ -1.85
VCAN-207ENST00000507162 Q6ZRX8 168 aa3.51□□□□□ -1.85
VCAN-207ENST00000507162 Q6ZVH6 145 aa3.51□□□□□ -1.85
VCAN-207ENST00000507162 Q8N8P6 123 aa3.51□□□□□ -1.85
VCAN-207ENST00000507162 MAP1LC3AQ9H492 121 aa3.51□□□□□ -1.85
VCAN-207ENST00000507162 V9GYV3 84 aa3.51□□□□□ -1.85
VCAN-207ENST00000507162 A0A1B0GW15 77 aa3.5□□□□□ -1.85
VCAN-207ENST00000507162 Q1RN00 199 aa3.5□□□□□ -1.85
VCAN-207ENST00000507162 SLC25A34Q6PIV7 304 aa3.5□□□□□ -1.85
VCAN-207ENST00000507162 SCGB3A1Q96QR1 104 aa3.5□□□□□ -1.85
VCAN-207ENST00000507162 LAMTOR3Q9UHA4 124 aa3.5□□□□□ -1.85
VCAN-207ENST00000507162 A0A0G2JQZ4 141 aa3.49□□□□□ -1.85
VCAN-207ENST00000507162 S100A8P05109 93 aa3.49□□□□□ -1.85
VCAN-207ENST00000507162 JOSD1Q15040 202 aaPredicted RBP3.49□□□□□ -1.85
VCAN-207ENST00000507162 Q5XG85 94 aa3.49□□□□□ -1.85
VCAN-207ENST00000507162 SMIM7Q9BQ49 75 aa3.49□□□□□ -1.85
VCAN-207ENST00000507162 PRO1933Q9H354 126 aa3.49□□□□□ -1.85
VCAN-207ENST00000507162 LOC107984156A0A0G2JMH3 177 aa3.48□□□□□ -1.85
VCAN-207ENST00000507162 TMEM250H0YL14 139 aa3.48□□□□□ -1.85
VCAN-207ENST00000507162 ADCYAP1P18509 176 aa3.48□□□□□ -1.85
VCAN-207ENST00000507162 DDTP30046 118 aa3.48□□□□□ -1.85
VCAN-207ENST00000507162 ALKAL2Q6UX46 152 aa3.48□□□□□ -1.85
VCAN-207ENST00000507162 ARL17AQ8IVW1 177 aa3.48□□□□□ -1.85
VCAN-207ENST00000507162 CST9LQ9H4G1 147 aa3.48□□□□□ -1.85
VCAN-207ENST00000507162 RBM12B-AS1Q9P1G2 102 aa3.48□□□□□ -1.85
VCAN-207ENST00000507162 SMIM27A0A1W2PRY6 76 aa3.47□□□□□ -1.85
VCAN-207ENST00000507162 PCP4L1A6NKN8 68 aa3.47□□□□□ -1.85
VCAN-207ENST00000507162 SPRR2EP22531 72 aa3.47□□□□□ -1.85
VCAN-207ENST00000507162 G0S2P27469 103 aa3.47□□□□□ -1.85
VCAN-207ENST00000507162 SPRR2BP35325 72 aa3.47□□□□□ -1.85
VCAN-207ENST00000507162 SPRR2AP35326 72 aa3.47□□□□□ -1.85
VCAN-207ENST00000507162 AKR1D1P51857 326 aa3.47□□□□□ -1.85
VCAN-207ENST00000507162 ZNF345Q14585 488 aa3.47□□□□□ -1.85
VCAN-207ENST00000507162 Q6ZVQ6 151 aa3.47□□□□□ -1.85
VCAN-207ENST00000507162 LINC00518Q8N0U6 118 aa3.47□□□□□ -1.85
VCAN-207ENST00000507162 TOMM6Q96B49 74 aa3.47□□□□□ -1.85
VCAN-207ENST00000507162 Q96NJ1 140 aa3.47□□□□□ -1.85
VCAN-207ENST00000507162 TCL1BO95988 128 aa3.46□□□□□ -1.86
VCAN-207ENST00000507162 SMIM13P0DJ93 91 aa3.46□□□□□ -1.86
VCAN-207ENST00000507162 LINC00299Q6ZSB3 139 aa3.46□□□□□ -1.86
VCAN-207ENST00000507162 DEFB105AQ8NG35 78 aa3.45□□□□□ -1.86
VCAN-207ENST00000507162 A0A1B0GXF2 115 aa3.44□□□□□ -1.86
VCAN-207ENST00000507162 SPRR1BP22528 89 aa3.44□□□□□ -1.86
VCAN-207ENST00000507162 NDUFA6P56556 154 aa3.44□□□□□ -1.86
VCAN-207ENST00000507162 TAL2Q16559 108 aa3.44□□□□□ -1.86
VCAN-207ENST00000507162 MIR7-3HGQ8N6C7 128 aa3.44□□□□□ -1.86
VCAN-207ENST00000507162 LAMTOR2Q9Y2Q5 125 aa3.44□□□□□ -1.86
VCAN-207ENST00000507162 A8MWP4 228 aa3.43□□□□□ -1.86
VCAN-207ENST00000507162 K7EMI3 77 aa3.43□□□□□ -1.86
VCAN-207ENST00000507162 SEC61GP60059 68 aa3.43□□□□□ -1.86
VCAN-207ENST00000507162 MEIG1Q5JSS6 88 aa3.43□□□□□ -1.86
VCAN-207ENST00000507162 S100A7L2Q5SY68 101 aa3.43□□□□□ -1.86
VCAN-207ENST00000507162 SFTA2Q6UW10 78 aa3.43□□□□□ -1.86
VCAN-207ENST00000507162 NXT2Q9NPJ8 142 aaKnown RBP3.43□□□□□ -1.86
VCAN-207ENST00000507162 ZNF22P17026 224 aaPredicted RBP3.42□□□□□ -1.86
VCAN-207ENST00000507162 HINT1P49773 126 aaPredicted RBP3.42□□□□□ -1.86
VCAN-207ENST00000507162 ADIRFQ15847 76 aa3.42□□□□□ -1.86
VCAN-207ENST00000507162 TRAV23DV6A0A075B6W5 121 aa3.41□□□□□ -1.86
VCAN-207ENST00000507162 IGLC3P0DOY3 106 aa3.41□□□□□ -1.86
VCAN-207ENST00000507162 IGFL1Q6UW32 110 aa3.41□□□□□ -1.86
VCAN-207ENST00000507162 FAM218AQ96MZ4 157 aa3.41□□□□□ -1.86
VCAN-207ENST00000507162 ZNF73O43830 326 aaPredicted RBP3.4□□□□□ -1.87
VCAN-207ENST00000507162 HRES1P13985 223 aa3.4□□□□□ -1.87
VCAN-207ENST00000507162 TMEM170BQ5T4T1 132 aa3.4□□□□□ -1.87
VCAN-207ENST00000507162 SPRR2FQ96RM1 72 aa3.4□□□□□ -1.87
VCAN-207ENST00000507162 TRBV10-2A0A0K0K1G8 114 aa3.39□□□□□ -1.87
VCAN-207ENST00000507162 KRTAP15-1Q3LI76 137 aa3.39□□□□□ -1.87
VCAN-207ENST00000507162 A8MUU9 505 aa3.38□□□□□ -1.87
VCAN-207ENST00000507162 KRTAP16-1A8MUX0 517 aa3.38□□□□□ -1.87
VCAN-207ENST00000507162 SRP19P09132 144 aaKnown RBP3.38□□□□□ -1.87
VCAN-207ENST00000507162 MTURNQ8N3F0 131 aa3.38□□□□□ -1.87
VCAN-207ENST00000507162 DHRS4-AS1Q9P1J3 65 aa3.38□□□□□ -1.87
VCAN-207ENST00000507162 TEX49A0A1B0GTD5 131 aa3.37□□□□□ -1.87
VCAN-207ENST00000507162 ATP5L2Q7Z4Y8 100 aa3.37□□□□□ -1.87
VCAN-207ENST00000507162 C11orf86A6NJI1 115 aa3.36□□□□□ -1.87
VCAN-207ENST00000507162 SPRR2DP22532 72 aa3.36□□□□□ -1.87
VCAN-207ENST00000507162 FA2HQ7L5A8 372 aa3.36□□□□□ -1.87
VCAN-207ENST00000507162 MAP1LC3CQ9BXW4 147 aa3.36□□□□□ -1.87
VCAN-207ENST00000507162 SPANXB1Q9NS25 103 aaPredicted RBP3.36□□□□□ -1.87
VCAN-207ENST00000507162 LINC01549A6NIU2 74 aa3.35□□□□□ -1.87
VCAN-207ENST00000507162 LINC00587B1AMM8 73 aa3.35□□□□□ -1.87
VCAN-207ENST00000507162 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
VCAN-207ENST00000507162 NOTCH2NLQ7Z3S9 236 aa3.35□□□□□ -1.87
VCAN-207ENST00000507162 NAT8Q9UHE5 227 aa3.35□□□□□ -1.87
VCAN-207ENST00000507162 KRTAP10-5P60370 271 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms