RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 MPC2O95563 127 aa2.3□□□□□ -2.04
HERC4-213ENST00000506515 AKR1C8PQ5T2L2 129 aa2.3□□□□□ -2.04
HERC4-213ENST00000506515 CDC42SE2Q9NRR3 84 aa2.3□□□□□ -2.04
HERC4-213ENST00000506515 LINC00846Q9NV44 126 aa2.3□□□□□ -2.04
HERC4-213ENST00000506515 BCL2P10415 239 aa2.29□□□□□ -2.04
HERC4-213ENST00000506515 IL7P13232 177 aa2.29□□□□□ -2.04
HERC4-213ENST00000506515 C1orf195Q5TG92 126 aa2.29□□□□□ -2.04
HERC4-213ENST00000506515 LINC00299Q6ZSB3 139 aa2.29□□□□□ -2.04
HERC4-213ENST00000506515 FAM19A2Q8N3H0 131 aa2.29□□□□□ -2.04
HERC4-213ENST00000506515 C9orf62Q8N4C0 152 aa2.29□□□□□ -2.04
HERC4-213ENST00000506515 BORCS7Q96B45 105 aa2.29□□□□□ -2.04
HERC4-213ENST00000506515 SMIM3Q9BZL3 60 aa2.29□□□□□ -2.04
HERC4-213ENST00000506515 ST20Q9HBF5 79 aa2.29□□□□□ -2.04
HERC4-213ENST00000506515 TP73-AS1Q9UF72 201 aa2.29□□□□□ -2.04
HERC4-213ENST00000506515 C7orf77A4D0Y5 90 aa2.28□□□□□ -2.04
HERC4-213ENST00000506515 BCE1O60756 84 aa2.28□□□□□ -2.04
HERC4-213ENST00000506515 SPINK1P00995 79 aa2.28□□□□□ -2.04
HERC4-213ENST00000506515 SPAG11BQ08648 103 aa2.28□□□□□ -2.04
HERC4-213ENST00000506515 UBE2D4Q9Y2X8 147 aa2.28□□□□□ -2.04
HERC4-213ENST00000506515 TGIF2-C20orf24A0A0A6YYL0 155 aa2.27□□□□□ -2.05
HERC4-213ENST00000506515 TRBV6-5A0A0K0K1A5 114 aa2.27□□□□□ -2.05
HERC4-213ENST00000506515 UMAD1C9J7I0 102 aa2.27□□□□□ -2.05
HERC4-213ENST00000506515 M0R2T5 61 aa2.27□□□□□ -2.05
HERC4-213ENST00000506515 SIX6O95475 246 aa2.27□□□□□ -2.05
HERC4-213ENST00000506515 FCER1GP30273 86 aa2.27□□□□□ -2.05
HERC4-213ENST00000506515 CEBPGP53567 150 aa2.27□□□□□ -2.05
HERC4-213ENST00000506515 CKS1BP61024 79 aa2.27□□□□□ -2.05
HERC4-213ENST00000506515 BATFQ16520 125 aa2.27□□□□□ -2.05
HERC4-213ENST00000506515 LYZL1Q6UWQ5 148 aa2.27□□□□□ -2.05
HERC4-213ENST00000506515 TIMM21Q9BVV7 248 aa2.27□□□□□ -2.05
HERC4-213ENST00000506515 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.26□□□□□ -2.05
HERC4-213ENST00000506515 TRAV13-1A0A0B4J241 112 aa2.26□□□□□ -2.05
HERC4-213ENST00000506515 TRBV27A0A0K0K1C4 114 aa2.26□□□□□ -2.05
HERC4-213ENST00000506515 IGKV2-29A2NJV5 120 aaPredicted RBP2.26□□□□□ -2.05
HERC4-213ENST00000506515 ZNF727A8MUV8 499 aa2.26□□□□□ -2.05
HERC4-213ENST00000506515 J3QQQ9 107 aa2.26□□□□□ -2.05
HERC4-213ENST00000506515 PLA2G10O15496 165 aa2.26□□□□□ -2.05
HERC4-213ENST00000506515 IGLC6P0CF74 106 aa2.26□□□□□ -2.05
HERC4-213ENST00000506515 SEC11AP67812 179 aa2.26□□□□□ -2.05
HERC4-213ENST00000506515 C5orf38Q86SI9 138 aa2.26□□□□□ -2.05
HERC4-213ENST00000506515 S100ZQ8WXG8 99 aa2.26□□□□□ -2.05
HERC4-213ENST00000506515 CNFNQ9BYD5 112 aa2.26□□□□□ -2.05
HERC4-213ENST00000506515 C22orf24Q9Y442 160 aa2.26□□□□□ -2.05
HERC4-213ENST00000506515 MAP1LC3B2A6NCE7 125 aa2.25□□□□□ -2.05
HERC4-213ENST00000506515 INMT-MINDY4F8WBC2 141 aa2.25□□□□□ -2.05
HERC4-213ENST00000506515 G0S2P27469 103 aa2.25□□□□□ -2.05
HERC4-213ENST00000506515 GNG4P50150 75 aa2.25□□□□□ -2.05
HERC4-213ENST00000506515 DEFA1P59665 94 aa2.25□□□□□ -2.05
HERC4-213ENST00000506515 DEFA3P59666 94 aa2.25□□□□□ -2.05
HERC4-213ENST00000506515 RPS29P62273 56 aaKnown RBP2.25□□□□□ -2.05
HERC4-213ENST00000506515 KRTAP13-4Q3LI77 160 aa2.25□□□□□ -2.05
HERC4-213ENST00000506515 SMCR5Q8TEV8 140 aa2.25□□□□□ -2.05
HERC4-213ENST00000506515 SFT2D1Q8WV19 159 aa2.25□□□□□ -2.05
HERC4-213ENST00000506515 TTTY13Q9BZ97 58 aa2.25□□□□□ -2.05
HERC4-213ENST00000506515 MAP1LC3BQ9GZQ8 125 aa2.25□□□□□ -2.05
HERC4-213ENST00000506515 PDE6DO43924 150 aa2.24□□□□□ -2.05
HERC4-213ENST00000506515 RPL35P42766 123 aaKnown RBP2.24□□□□□ -2.05
HERC4-213ENST00000506515 POLR2KP53803 58 aaKnown RBP2.24□□□□□ -2.05
HERC4-213ENST00000506515 RAB5BP61020 215 aa2.24□□□□□ -2.05
HERC4-213ENST00000506515 HBBP68871 147 aa2.24□□□□□ -2.05
HERC4-213ENST00000506515 CCL20P78556 96 aa2.24□□□□□ -2.05
HERC4-213ENST00000506515 S100A12P80511 92 aa2.24□□□□□ -2.05
HERC4-213ENST00000506515 KCNRGQ8N5I3 272 aa2.24□□□□□ -2.05
HERC4-213ENST00000506515 MBD3L1Q8WWY6 194 aa2.24□□□□□ -2.05
HERC4-213ENST00000506515 RETNLBQ9BQ08 111 aa2.24□□□□□ -2.05
HERC4-213ENST00000506515 MANBALQ9NQG1 85 aa2.24□□□□□ -2.05
HERC4-213ENST00000506515 PRO2289Q9P1D8 64 aa2.24□□□□□ -2.05
HERC4-213ENST00000506515 NPYP01303 97 aa2.23□□□□□ -2.05
HERC4-213ENST00000506515 MRPS36P82909 103 aaKnown RBP2.23□□□□□ -2.05
HERC4-213ENST00000506515 UNQ6190/PRO20217Q6UXQ8 127 aa2.23□□□□□ -2.05
HERC4-213ENST00000506515 SSBP3-AS1Q7Z2R9 100 aa2.23□□□□□ -2.05
HERC4-213ENST00000506515 C20orf78Q9BR46 151 aa2.23□□□□□ -2.05
HERC4-213ENST00000506515 C2orf88Q9BSF0 95 aa2.23□□□□□ -2.05
HERC4-213ENST00000506515 SPANXA1Q9NS26 97 aa2.23□□□□□ -2.05
HERC4-213ENST00000506515 TMEM242Q9NWH2 141 aa2.23□□□□□ -2.05
HERC4-213ENST00000506515 C6orf48Q9UBA6 75 aa2.23□□□□□ -2.05
HERC4-213ENST00000506515 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
HERC4-213ENST00000506515 IFI27P40305 119 aaPredicted RBP2.22□□□□□ -2.05
HERC4-213ENST00000506515 FOXA3P55318 350 aaPredicted RBP2.22□□□□□ -2.05
HERC4-213ENST00000506515 COX6B2Q6YFQ2 88 aa2.22□□□□□ -2.05
HERC4-213ENST00000506515 TMEM191AQ9H0A3 160 aa2.22□□□□□ -2.05
HERC4-213ENST00000506515 TRBV20OR9-2A0A075B6H5 130 aa2.21□□□□□ -2.06
HERC4-213ENST00000506515 A0A1B0GUT8 65 aa2.21□□□□□ -2.06
HERC4-213ENST00000506515 F8VRH5 84 aa2.21□□□□□ -2.06
HERC4-213ENST00000506515 S100A8P05109 93 aa2.21□□□□□ -2.06
HERC4-213ENST00000506515 Q8IZM0 81 aa2.21□□□□□ -2.06
HERC4-213ENST00000506515 RPL39LQ96EH5 51 aaKnown RBP2.21□□□□□ -2.06
HERC4-213ENST00000506515 MED9Q9NWA0 146 aa2.21□□□□□ -2.06
HERC4-213ENST00000506515 SYNE2Q8WXH0 6885 aaKnown RBP2.2□□□□□ -2.06
HERC4-213ENST00000506515 LINC01549A6NIU2 74 aa2.2□□□□□ -2.06
HERC4-213ENST00000506515 PPBPP02775 128 aa2.2□□□□□ -2.06
HERC4-213ENST00000506515 RPL7L1Q6DKI1 246 aaKnown RBP2.2□□□□□ -2.06
HERC4-213ENST00000506515 SFTA2Q6UW10 78 aa2.2□□□□□ -2.06
HERC4-213ENST00000506515 PLEKHB2Q96CS7 222 aa2.2□□□□□ -2.06
HERC4-213ENST00000506515 ZNF625Q96I27 306 aaPredicted RBP2.2□□□□□ -2.06
HERC4-213ENST00000506515 A0A1B0GV50 99 aa2.19□□□□□ -2.06
HERC4-213ENST00000506515 F8W036 122 aa2.19□□□□□ -2.06
HERC4-213ENST00000506515 K7EMI3 77 aa2.19□□□□□ -2.06
HERC4-213ENST00000506515 CKS2P33552 79 aa2.19□□□□□ -2.06
HERC4-213ENST00000506515 MT1HP80294 61 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms