RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 IGLV7-46A0A075B6I9 117 aa9.51□□□□□ -0.89
PDLIM7-215ENST00000506161 NDUFC2O95298 119 aa9.51□□□□□ -0.89
PDLIM7-215ENST00000506161 ZNF706Q9Y5V0 76 aaPredicted RBP9.51□□□□□ -0.89
PDLIM7-215ENST00000506161 C3orf79P0CE67 100 aa9.5□□□□□ -0.89
PDLIM7-215ENST00000506161 Q6ZRX8 168 aa9.5□□□□□ -0.89
PDLIM7-215ENST00000506161 TPRXLQ17RH7 258 aa9.49□□□□□ -0.89
PDLIM7-215ENST00000506161 MIEN1Q9BRT3 115 aa9.48□□□□□ -0.89
PDLIM7-215ENST00000506161 TRAV23DV6A0A075B6W5 121 aa9.47□□□□□ -0.89
PDLIM7-215ENST00000506161 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
PDLIM7-215ENST00000506161 LINC00308Q8TCZ7 52 aa9.47□□□□□ -0.89
PDLIM7-215ENST00000506161 IGLV9-49A0A0B4J1Y8 123 aa9.46□□□□□ -0.9
PDLIM7-215ENST00000506161 MOBPQ13875 183 aa9.46□□□□□ -0.9
PDLIM7-215ENST00000506161 S100A7L2Q5SY68 101 aa9.46□□□□□ -0.9
PDLIM7-215ENST00000506161 PET117Q6UWS5 81 aa9.46□□□□□ -0.9
PDLIM7-215ENST00000506161 CTAG1AP78358 180 aa9.45□□□□□ -0.9
PDLIM7-215ENST00000506161 COA6Q5JTJ3 125 aaKnown RBP9.45□□□□□ -0.9
PDLIM7-215ENST00000506161 SPAG11AQ6PDA7 123 aa9.45□□□□□ -0.9
PDLIM7-215ENST00000506161 ZNF73O43830 326 aaPredicted RBP9.44□□□□□ -0.9
PDLIM7-215ENST00000506161 ZNF815PA8K554 130 aa9.43□□□□□ -0.9
PDLIM7-215ENST00000506161 ANKRD39Q53RE8 183 aa9.43□□□□□ -0.9
PDLIM7-215ENST00000506161 TIMM17BO60830 172 aa9.42□□□□□ -0.9
PDLIM7-215ENST00000506161 KRTDAPP60985 99 aa9.42□□□□□ -0.9
PDLIM7-215ENST00000506161 CDIP1Q9H305 208 aa9.42□□□□□ -0.9
PDLIM7-215ENST00000506161 CRCT1Q9UGL9 99 aa9.42□□□□□ -0.9
PDLIM7-215ENST00000506161 S100A12P80511 92 aa9.41□□□□□ -0.9
PDLIM7-215ENST00000506161 KRTAP13-3Q3SY46 172 aa9.41□□□□□ -0.9
PDLIM7-215ENST00000506161 ATOH7Q8N100 152 aa9.4□□□□□ -0.9
PDLIM7-215ENST00000506161 SPANXCQ9NY87 97 aa9.4□□□□□ -0.9
PDLIM7-215ENST00000506161 C4orf48Q5BLP8 95 aa9.39□□□□□ -0.91
PDLIM7-215ENST00000506161 Q8N377 158 aa9.39□□□□□ -0.91
PDLIM7-215ENST00000506161 SPINK1P00995 79 aa9.38□□□□□ -0.91
PDLIM7-215ENST00000506161 LCE2DQ5TA82 110 aaPredicted RBP9.38□□□□□ -0.91
PDLIM7-215ENST00000506161 SSBP3-AS1Q7Z2R9 100 aa9.37□□□□□ -0.91
PDLIM7-215ENST00000506161 OR13C6PQ8NH95 151 aa9.37□□□□□ -0.91
PDLIM7-215ENST00000506161 FSIP2Q5CZC0 6907 aa9.37□□□□□ -0.91
PDLIM7-215ENST00000506161 FP248Q71RG6 208 aaPredicted RBP9.36□□□□□ -0.91
PDLIM7-215ENST00000506161 PCP2Q8IVA1 136 aa9.35□□□□□ -0.91
PDLIM7-215ENST00000506161 KRTAP4-1Q9BYQ7 146 aa9.35□□□□□ -0.91
PDLIM7-215ENST00000506161 JOSD1Q15040 202 aaPredicted RBP9.34□□□□□ -0.91
PDLIM7-215ENST00000506161 C9orf153Q5TBE3 101 aa9.34□□□□□ -0.91
PDLIM7-215ENST00000506161 SPANXDQ9BXN6 97 aa9.34□□□□□ -0.91
PDLIM7-215ENST00000506161 SPRR1BP22528 89 aa9.33□□□□□ -0.92
PDLIM7-215ENST00000506161 ELOF1P60002 83 aaKnown RBP9.32□□□□□ -0.92
PDLIM7-215ENST00000506161 C6orf99Q4VX62 202 aa9.32□□□□□ -0.92
PDLIM7-215ENST00000506161 RPS29P62273 56 aaKnown RBP9.31□□□□□ -0.92
PDLIM7-215ENST00000506161 COX7BP24311 80 aa9.29□□□□□ -0.92
PDLIM7-215ENST00000506161 MUSTN1Q8IVN3 82 aa9.29□□□□□ -0.92
PDLIM7-215ENST00000506161 SCGB1D4Q6XE38 83 aa9.28□□□□□ -0.92
PDLIM7-215ENST00000506161 LINC01547P58512 204 aaPredicted RBP9.27□□□□□ -0.93
PDLIM7-215ENST00000506161 HRCT1Q6UXD1 115 aa9.27□□□□□ -0.93
PDLIM7-215ENST00000506161 HIST3H2BBQ8N257 126 aa9.27□□□□□ -0.93
PDLIM7-215ENST00000506161 C5orf52A6NGY3 159 aa9.26□□□□□ -0.93
PDLIM7-215ENST00000506161 HINT1P49773 126 aaPredicted RBP9.26□□□□□ -0.93
PDLIM7-215ENST00000506161 LINC00518Q8N0U6 118 aa9.26□□□□□ -0.93
PDLIM7-215ENST00000506161 DHRS4-AS1Q9P1J3 65 aa9.26□□□□□ -0.93
PDLIM7-215ENST00000506161 A0A0G2JQZ4 141 aa9.25□□□□□ -0.93
PDLIM7-215ENST00000506161 C20orf202A1L168 122 aa9.25□□□□□ -0.93
PDLIM7-215ENST00000506161 SLC25A20O43772 301 aa9.25□□□□□ -0.93
PDLIM7-215ENST00000506161 ASB16-AS1Q495Z4 193 aa9.25□□□□□ -0.93
PDLIM7-215ENST00000506161 SMIM29Q86T20 159 aa9.25□□□□□ -0.93
PDLIM7-215ENST00000506161 HIST1H2BLQ99880 126 aa9.25□□□□□ -0.93
PDLIM7-215ENST00000506161 S100A1P23297 94 aa9.24□□□□□ -0.93
PDLIM7-215ENST00000506161 Q1RN00 199 aa9.24□□□□□ -0.93
PDLIM7-215ENST00000506161 DEFB105AQ8NG35 78 aa9.24□□□□□ -0.93
PDLIM7-215ENST00000506161 CBY1Q9Y3M2 126 aa9.24□□□□□ -0.93
PDLIM7-215ENST00000506161 IFITM1P13164 125 aa9.22□□□□□ -0.93
PDLIM7-215ENST00000506161 XP32Q5T750 250 aa9.22□□□□□ -0.93
PDLIM7-215ENST00000506161 A6NDN8 102 aa9.21□□□□□ -0.94
PDLIM7-215ENST00000506161 SMIM11BQ8TCY0 68 aa9.2□□□□□ -0.94
PDLIM7-215ENST00000506161 TRBV7-6A0A0J9YX20 115 aa9.19□□□□□ -0.94
PDLIM7-215ENST00000506161 TAL2Q16559 108 aa9.19□□□□□ -0.94
PDLIM7-215ENST00000506161 LAMTOR3Q9UHA4 124 aa9.19□□□□□ -0.94
PDLIM7-215ENST00000506161 IGLV5-48A0A075B6I7 105 aa9.18□□□□□ -0.94
PDLIM7-215ENST00000506161 Q6ZVH6 145 aa9.18□□□□□ -0.94
PDLIM7-215ENST00000506161 A0A1B0GWB2 263 aa9.17□□□□□ -0.94
PDLIM7-215ENST00000506161 H7C2G1 150 aa9.17□□□□□ -0.94
PDLIM7-215ENST00000506161 TEX49A0A1B0GTD5 131 aa9.16□□□□□ -0.94
PDLIM7-215ENST00000506161 SLC25A34Q6PIV7 304 aa9.15□□□□□ -0.94
PDLIM7-215ENST00000506161 A4D1N5 150 aa9.13□□□□□ -0.95
PDLIM7-215ENST00000506161 C9orf92A6NGG3 77 aa9.13□□□□□ -0.95
PDLIM7-215ENST00000506161 S100A2P29034 98 aa9.13□□□□□ -0.95
PDLIM7-215ENST00000506161 SEC61BP60468 96 aaKnown RBP9.12□□□□□ -0.95
PDLIM7-215ENST00000506161 SNRPEP62304 92 aaKnown RBP9.12□□□□□ -0.95
PDLIM7-215ENST00000506161 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
PDLIM7-215ENST00000506161 TRAV13-2A0A0B4J235 113 aa9.11□□□□□ -0.95
PDLIM7-215ENST00000506161 LIMD2Q9BT23 127 aa9.11□□□□□ -0.95
PDLIM7-215ENST00000506161 PRO1933Q9H354 126 aa9.11□□□□□ -0.95
PDLIM7-215ENST00000506161 CD164Q04900 197 aa9.1□□□□□ -0.95
PDLIM7-215ENST00000506161 AKR1D1P51857 326 aa9.09□□□□□ -0.95
PDLIM7-215ENST00000506161 KRTAP19-2Q3LHN2 52 aa9.09□□□□□ -0.95
PDLIM7-215ENST00000506161 LCE2CQ5TA81 110 aa9.09□□□□□ -0.95
PDLIM7-215ENST00000506161 C12orf57Q99622 126 aa9.09□□□□□ -0.95
PDLIM7-215ENST00000506161 C1orf195Q5TG92 126 aa9.08□□□□□ -0.96
PDLIM7-215ENST00000506161 LINC00575Q6W349 94 aa9.08□□□□□ -0.96
PDLIM7-215ENST00000506161 Q5XG85 94 aa9.06□□□□□ -0.96
PDLIM7-215ENST00000506161 S100A6P06703 90 aa9.05□□□□□ -0.96
PDLIM7-215ENST00000506161 PCOTHQ58A44 107 aa9.05□□□□□ -0.96
PDLIM7-215ENST00000506161 HSBP1L1C9JCN9 74 aa9.04□□□□□ -0.96
PDLIM7-215ENST00000506161 SCGB1D1O95968 90 aa9.03□□□□□ -0.96
PDLIM7-215ENST00000506161 Q6ZQY7 126 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms