RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ZNF625Q96I27 306 aaPredicted RBP1.76□□□□□ -2.13
TCOF1-208ENST00000506063 HIST1H2BNQ99877 126 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 HIST1H2BMQ99879 126 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 SND1-IT1Q9HBX3 110 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 CBY1Q9Y3M2 126 aa1.76□□□□□ -2.13
TCOF1-208ENST00000506063 IGLV5-37A0A075B6J1 123 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 IGKV2D-26A0A0A0MRZ7 120 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 A0A0U1RRA0 63 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 ETDCA0A1B0GVM5 59 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 COLCA2A8K830 154 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 TMEM238C9JI98 176 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 J3QQQ9 107 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 PRYO14603 147 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 NCR3O14931 201 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 LEPROTO15243 131 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 BCE1O60756 84 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 LINC00310P59036 64 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 KRTDAPP60985 99 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 PET117Q6UWS5 81 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 SCGB1D4Q6XE38 83 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 FAM19A1Q7Z5A9 133 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 BOD1L2Q8IYS8 172 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 MIR7-3HGQ8N6C7 128 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 PMCHL2Q9BQD1 86 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 SPANXB1Q9NS25 103 aaPredicted RBP1.75□□□□□ -2.13
TCOF1-208ENST00000506063 C22orf24Q9Y442 160 aa1.75□□□□□ -2.13
TCOF1-208ENST00000506063 ZNF706Q9Y5V0 76 aaPredicted RBP1.75□□□□□ -2.13
TCOF1-208ENST00000506063 RPL37AP8A6NKH3 93 aa1.74□□□□□ -2.13
TCOF1-208ENST00000506063 ZNF815PA8K554 130 aa1.74□□□□□ -2.13
TCOF1-208ENST00000506063 E9PLD3 99 aa1.74□□□□□ -2.13
TCOF1-208ENST00000506063 SYS1-DBNDD2H3BUS1 97 aa1.74□□□□□ -2.13
TCOF1-208ENST00000506063 SMIM13P0DJ93 91 aa1.74□□□□□ -2.13
TCOF1-208ENST00000506063 VPREB1P12018 145 aa1.74□□□□□ -2.13
TCOF1-208ENST00000506063 TSPEAR-AS2P59090 65 aa1.74□□□□□ -2.13
TCOF1-208ENST00000506063 KRTAP10-10P60014 251 aa1.74□□□□□ -2.13
TCOF1-208ENST00000506063 FAM229BQ4G0N7 80 aa1.74□□□□□ -2.13
TCOF1-208ENST00000506063 S100A7L2Q5SY68 101 aa1.74□□□□□ -2.13
TCOF1-208ENST00000506063 LINC01545Q5VT33 79 aa1.74□□□□□ -2.13
TCOF1-208ENST00000506063 TRAV23DV6A0A075B6W5 121 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 TRBV10-2A0A0K0K1G8 114 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 M0R378 163 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 C3orf79P0CE67 100 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 SPRR2EP22531 72 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 DDTP30046 118 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 SPRR2BP35325 72 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 SPRR2AP35326 72 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 HINT1P49773 126 aaPredicted RBP1.73□□□□□ -2.13
TCOF1-208ENST00000506063 NPC2P61916 151 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 PRLHP81277 87 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 JOSD1Q15040 202 aaPredicted RBP1.73□□□□□ -2.13
TCOF1-208ENST00000506063 COA6Q5JTJ3 125 aaKnown RBP1.73□□□□□ -2.13
TCOF1-208ENST00000506063 DAND5Q8N907 189 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 LINC00167Q96N53 147 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 HIGD2AQ9BW72 106 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 TMEM126AQ9H061 195 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 SPANXCQ9NY87 97 aa1.73□□□□□ -2.13
TCOF1-208ENST00000506063 A0A0J9YXY3 114 aa1.72□□□□□ -2.13
TCOF1-208ENST00000506063 TRBV10-3A0A0K0K1G6 114 aa1.72□□□□□ -2.13
TCOF1-208ENST00000506063 TIMM17BO60830 172 aa1.72□□□□□ -2.13
TCOF1-208ENST00000506063 NDUFC2O95298 119 aa1.72□□□□□ -2.13
TCOF1-208ENST00000506063 SNRPEP62304 92 aaKnown RBP1.72□□□□□ -2.13
TCOF1-208ENST00000506063 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
TCOF1-208ENST00000506063 KRTAP13-1Q8IUC0 172 aa1.72□□□□□ -2.13
TCOF1-208ENST00000506063 C3orf22Q8N5N4 141 aa1.72□□□□□ -2.13
TCOF1-208ENST00000506063 SPANXDQ9BXN6 97 aa1.72□□□□□ -2.13
TCOF1-208ENST00000506063 IFITM1P13164 125 aa1.71□□□□□ -2.14
TCOF1-208ENST00000506063 LCE1AQ5T7P2 110 aa1.71□□□□□ -2.14
TCOF1-208ENST00000506063 SLC25A34Q6PIV7 304 aa1.71□□□□□ -2.14
TCOF1-208ENST00000506063 Q6ZRX8 168 aa1.71□□□□□ -2.14
TCOF1-208ENST00000506063 Q6ZVH6 145 aa1.71□□□□□ -2.14
TCOF1-208ENST00000506063 ATOH7Q8N100 152 aa1.71□□□□□ -2.14
TCOF1-208ENST00000506063 HIST3H2BBQ8N257 126 aa1.71□□□□□ -2.14
TCOF1-208ENST00000506063 OR13C6PQ8NH95 151 aa1.71□□□□□ -2.14
TCOF1-208ENST00000506063 HIST1H2BLQ99880 126 aa1.71□□□□□ -2.14
TCOF1-208ENST00000506063 TRAV13-2A0A0B4J235 113 aa1.7□□□□□ -2.14
TCOF1-208ENST00000506063 ZNF73O43830 326 aaPredicted RBP1.7□□□□□ -2.14
TCOF1-208ENST00000506063 SCGB1D1O95968 90 aa1.7□□□□□ -2.14
TCOF1-208ENST00000506063 C4orf48Q5BLP8 95 aa1.7□□□□□ -2.14
TCOF1-208ENST00000506063 C9orf153Q5TBE3 101 aa1.7□□□□□ -2.14
TCOF1-208ENST00000506063 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
TCOF1-208ENST00000506063 SPAG11AQ6PDA7 123 aa1.7□□□□□ -2.14
TCOF1-208ENST00000506063 LINC00518Q8N0U6 118 aa1.7□□□□□ -2.14
TCOF1-208ENST00000506063 Q8N377 158 aa1.7□□□□□ -2.14
TCOF1-208ENST00000506063 LINC00308Q8TCZ7 52 aa1.7□□□□□ -2.14
TCOF1-208ENST00000506063 VAMP8Q9BV40 100 aa1.7□□□□□ -2.14
TCOF1-208ENST00000506063 KCNQ1DNQ9H478 68 aa1.7□□□□□ -2.14
TCOF1-208ENST00000506063 NHP2Q9NX24 153 aaKnown RBP1.7□□□□□ -2.14
TCOF1-208ENST00000506063 DSTQ03001 7570 aaKnown RBP1.69□□□□□ -2.14
TCOF1-208ENST00000506063 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 LOC107984156A0A0G2JMH3 177 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 TMEM238LA0A1B0GVL6 79 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 A0A1B0GWB2 263 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 A6NDN8 102 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 A6NJY4 79 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 F8WEM9 126 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 SLC25A20O43772 301 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 IGLV6-57P01721 117 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 COX7BP24311 80 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 SPRR1AP35321 89 aa1.69□□□□□ -2.14
TCOF1-208ENST00000506063 MOBPQ13875 183 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms