RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 SRSF9Q13242 221 aaKnown RBP eCLIP3.03□□□□□ -1.92
LMNB1-208ENST00000504788 FAM19A5Q7Z5A7 132 aaPredicted RBP3.03□□□□□ -1.92
LMNB1-208ENST00000504788 MRPL55Q7Z7F7 128 aaKnown RBP3.03□□□□□ -1.92
LMNB1-208ENST00000504788 VAMP8Q9BV40 100 aa3.03□□□□□ -1.92
LMNB1-208ENST00000504788 HIGD1BQ9P298 99 aa3.03□□□□□ -1.92
LMNB1-208ENST00000504788 PSORS1C2Q9UIG4 136 aa3.03□□□□□ -1.92
LMNB1-208ENST00000504788 SPRR1AP35321 89 aa3.03□□□□□ -1.93
LMNB1-208ENST00000504788 Q5VSD8 79 aa3.03□□□□□ -1.93
LMNB1-208ENST00000504788 LINC00337Q8N6G1 96 aa3.03□□□□□ -1.93
LMNB1-208ENST00000504788 FLG2Q5D862 2391 aaPredicted RBP3.02□□□□□ -1.93
LMNB1-208ENST00000504788 TRBV10-2A0A0K0K1G8 114 aa3.02□□□□□ -1.93
LMNB1-208ENST00000504788 HSBP1L1C9JCN9 74 aa3.02□□□□□ -1.93
LMNB1-208ENST00000504788 IGLV6-57P01721 117 aa3.02□□□□□ -1.93
LMNB1-208ENST00000504788 Q6ZVH6 145 aa3.02□□□□□ -1.93
LMNB1-208ENST00000504788 TMEM238C9JI98 176 aa3.01□□□□□ -1.93
LMNB1-208ENST00000504788 M0R378 163 aa3.01□□□□□ -1.93
LMNB1-208ENST00000504788 NPC2P61916 151 aa3.01□□□□□ -1.93
LMNB1-208ENST00000504788 SLC25A34Q6PIV7 304 aa3.01□□□□□ -1.93
LMNB1-208ENST00000504788 SCGB1D4Q6XE38 83 aa3.01□□□□□ -1.93
LMNB1-208ENST00000504788 MUSTN1Q8IVN3 82 aa3.01□□□□□ -1.93
LMNB1-208ENST00000504788 KCNQ1DNQ9H478 68 aa3.01□□□□□ -1.93
LMNB1-208ENST00000504788 TRBV10-3A0A0K0K1G6 114 aa3□□□□□ -1.93
LMNB1-208ENST00000504788 RPL37AP8A6NKH3 93 aa3□□□□□ -1.93
LMNB1-208ENST00000504788 IFITM1P13164 125 aa3□□□□□ -1.93
LMNB1-208ENST00000504788 HERC1Q15751 4861 aa3□□□□□ -1.93
LMNB1-208ENST00000504788 GAGE10A6NGK3 116 aa3□□□□□ -1.93
LMNB1-208ENST00000504788 RPL24P83731 157 aaKnown RBP3□□□□□ -1.93
LMNB1-208ENST00000504788 TMEM126AQ9H061 195 aa3□□□□□ -1.93
LMNB1-208ENST00000504788 A4D1N5 150 aa2.99□□□□□ -1.93
LMNB1-208ENST00000504788 NCR3O14931 201 aa2.99□□□□□ -1.93
LMNB1-208ENST00000504788 KRTAP1-4P0C5Y4 121 aa2.99□□□□□ -1.93
LMNB1-208ENST00000504788 RPL37AP61513 92 aaKnown RBP2.99□□□□□ -1.93
LMNB1-208ENST00000504788 DPH3Q96FX2 82 aa2.99□□□□□ -1.93
LMNB1-208ENST00000504788 IGLV7-43P04211 117 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 DDTP30046 118 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 FXYD2P54710 66 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 TAL2Q16559 108 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 NKAPP1Q8N9T2 125 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 MIEN1Q9BRT3 115 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 UQCR10Q9UDW1 63 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 A0A1B0GWB2 263 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 H0Y9J4 135 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 BCE1O60756 84 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 CFC1BP0CG36 223 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 CFC1P0CG37 223 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 C1orf137Q5JT78 98 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 REG3GQ6UW15 175 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 Q9BRP9 147 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 PRO1933Q9H354 126 aa2.98□□□□□ -1.93
LMNB1-208ENST00000504788 B5MCH6 92 aa2.97□□□□□ -1.93
LMNB1-208ENST00000504788 PRYO14603 147 aa2.97□□□□□ -1.93
LMNB1-208ENST00000504788 ZNF861PO60384 105 aa2.97□□□□□ -1.93
LMNB1-208ENST00000504788 PLA2G1BP04054 148 aaKnown RBP2.97□□□□□ -1.93
LMNB1-208ENST00000504788 MT1HL1P0DM35 61 aa2.97□□□□□ -1.93
LMNB1-208ENST00000504788 CEND1Q8N111 149 aa2.97□□□□□ -1.93
LMNB1-208ENST00000504788 SMCR5Q8TEV8 140 aa2.97□□□□□ -1.93
LMNB1-208ENST00000504788 A0A0B4J2C4 111 aa2.96□□□□□ -1.94
LMNB1-208ENST00000504788 UBE2BP63146 152 aa2.96□□□□□ -1.94
LMNB1-208ENST00000504788 PRLHP81277 87 aa2.96□□□□□ -1.94
LMNB1-208ENST00000504788 HSD52Q0P140 79 aa2.96□□□□□ -1.94
LMNB1-208ENST00000504788 SPINK6Q6UWN8 80 aa2.96□□□□□ -1.94
LMNB1-208ENST00000504788 HIST1H4GQ99525 98 aa2.96□□□□□ -1.94
LMNB1-208ENST00000504788 TRAV23DV6A0A075B6W5 121 aa2.96□□□□□ -1.94
LMNB1-208ENST00000504788 TSTD3H0UI37 97 aa2.96□□□□□ -1.94
LMNB1-208ENST00000504788 ZNF73O43830 326 aaPredicted RBP2.96□□□□□ -1.94
LMNB1-208ENST00000504788 ERC2-IT1O76042 136 aa2.96□□□□□ -1.94
LMNB1-208ENST00000504788 Q6ZRX8 168 aa2.96□□□□□ -1.94
LMNB1-208ENST00000504788 SMIM11BQ8TCY0 68 aa2.96□□□□□ -1.94
LMNB1-208ENST00000504788 ELOF1P60002 83 aaKnown RBP2.95□□□□□ -1.94
LMNB1-208ENST00000504788 BVES-AS1Q5T3Y7 98 aa2.95□□□□□ -1.94
LMNB1-208ENST00000504788 COPS9Q8WXC6 57 aa2.95□□□□□ -1.94
LMNB1-208ENST00000504788 INAFM2P0DMQ5 153 aa2.94□□□□□ -1.94
LMNB1-208ENST00000504788 RPL28P46779 137 aaKnown RBP2.94□□□□□ -1.94
LMNB1-208ENST00000504788 KRTAP10-8P60410 259 aa2.94□□□□□ -1.94
LMNB1-208ENST00000504788 C6orf99Q4VX62 202 aa2.94□□□□□ -1.94
LMNB1-208ENST00000504788 LINC01600Q96MT4 127 aa2.94□□□□□ -1.94
LMNB1-208ENST00000504788 A0A087X002 238 aa2.93□□□□□ -1.94
LMNB1-208ENST00000504788 TRAV13-2A0A0B4J235 113 aa2.93□□□□□ -1.94
LMNB1-208ENST00000504788 TRBV7-6A0A0J9YX20 115 aa2.93□□□□□ -1.94
LMNB1-208ENST00000504788 KRTAP29-1A8MX34 341 aaPredicted RBP2.93□□□□□ -1.94
LMNB1-208ENST00000504788 LINC01547P58512 204 aaPredicted RBP2.93□□□□□ -1.94
LMNB1-208ENST00000504788 S100A7L2Q5SY68 101 aa2.93□□□□□ -1.94
LMNB1-208ENST00000504788 FAM19A1Q7Z5A9 133 aa2.93□□□□□ -1.94
LMNB1-208ENST00000504788 SNHG12Q9BXW3 62 aa2.93□□□□□ -1.94
LMNB1-208ENST00000504788 HMCN2Q8NDA2 5059 aa2.93□□□□□ -1.94
LMNB1-208ENST00000504788 A6NDN8 102 aa2.93□□□□□ -1.94
LMNB1-208ENST00000504788 K7ERJ3 54 aa2.93□□□□□ -1.94
LMNB1-208ENST00000504788 KRTAP13-2Q52LG2 175 aa2.93□□□□□ -1.94
LMNB1-208ENST00000504788 LINC00483Q53H64 154 aa2.93□□□□□ -1.94
LMNB1-208ENST00000504788 C9orf118A6NHY6 69 aa2.92□□□□□ -1.94
LMNB1-208ENST00000504788 SPRR1BP22528 89 aa2.92□□□□□ -1.94
LMNB1-208ENST00000504788 RPL13AP40429 203 aaKnown RBP2.92□□□□□ -1.94
LMNB1-208ENST00000504788 OR13C6PQ8NH95 151 aa2.92□□□□□ -1.94
LMNB1-208ENST00000504788 DIRC1Q969H9 104 aa2.92□□□□□ -1.94
LMNB1-208ENST00000504788 FAM218AQ96MZ4 157 aa2.92□□□□□ -1.94
LMNB1-208ENST00000504788 SPRR4Q96PI1 79 aa2.92□□□□□ -1.94
LMNB1-208ENST00000504788 NHP2Q9NX24 153 aaKnown RBP2.92□□□□□ -1.94
LMNB1-208ENST00000504788 PRO1854Q9UHT4 67 aa2.92□□□□□ -1.94
LMNB1-208ENST00000504788 DMBT1Q9UGM3 2413 aaPredicted RBP2.92□□□□□ -1.94
LMNB1-208ENST00000504788 IGLV5-48A0A075B6I7 105 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms