RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 ASB16-AS1Q495Z4 193 aa5.16□□□□□ -1.58
PDGFC-204ENST00000504672 LITAFQ99732 161 aa5.16□□□□□ -1.58
PDGFC-204ENST00000504672 A0A0J9YXY3 114 aa5.15□□□□□ -1.59
PDGFC-204ENST00000504672 SCGB1D1O95968 90 aa5.15□□□□□ -1.59
PDGFC-204ENST00000504672 RPL28P46779 137 aaKnown RBP5.15□□□□□ -1.59
PDGFC-204ENST00000504672 BOD1L2Q8IYS8 172 aa5.15□□□□□ -1.59
PDGFC-204ENST00000504672 TOMM7Q9P0U1 55 aa5.15□□□□□ -1.59
PDGFC-204ENST00000504672 RPL37AP8A6NKH3 93 aa5.14□□□□□ -1.59
PDGFC-204ENST00000504672 BCE1O60756 84 aa5.14□□□□□ -1.59
PDGFC-204ENST00000504672 SMIM6P0DI80 62 aa5.14□□□□□ -1.59
PDGFC-204ENST00000504672 ATOH7Q8N100 152 aa5.14□□□□□ -1.59
PDGFC-204ENST00000504672 XAGE1AQ9HD64 81 aa5.14□□□□□ -1.59
PDGFC-204ENST00000504672 ERG28Q9UKR5 140 aa5.14□□□□□ -1.59
PDGFC-204ENST00000504672 IGLV5-37A0A075B6J1 123 aa5.13□□□□□ -1.59
PDGFC-204ENST00000504672 COX8AP10176 69 aa5.13□□□□□ -1.59
PDGFC-204ENST00000504672 LGALS3P17931 250 aaKnown RBP5.13□□□□□ -1.59
PDGFC-204ENST00000504672 HSBP1L1C9JCN9 74 aa5.12□□□□□ -1.59
PDGFC-204ENST00000504672 MT1HP80294 61 aa5.12□□□□□ -1.59
PDGFC-204ENST00000504672 KRTAP13-3Q3SY46 172 aa5.12□□□□□ -1.59
PDGFC-204ENST00000504672 LBHQ53QV2 105 aaPredicted RBP5.12□□□□□ -1.59
PDGFC-204ENST00000504672 Q6ZVH6 145 aa5.12□□□□□ -1.59
PDGFC-204ENST00000504672 PCP2Q8IVA1 136 aa5.12□□□□□ -1.59
PDGFC-204ENST00000504672 GAGE10A6NGK3 116 aa5.11□□□□□ -1.59
PDGFC-204ENST00000504672 ZNF815PA8K554 130 aa5.11□□□□□ -1.59
PDGFC-204ENST00000504672 SEC61BP60468 96 aaKnown RBP5.11□□□□□ -1.59
PDGFC-204ENST00000504672 VAMP8Q9BV40 100 aa5.11□□□□□ -1.59
PDGFC-204ENST00000504672 SPANXDQ9BXN6 97 aa5.11□□□□□ -1.59
PDGFC-204ENST00000504672 TTTY13Q9BZ97 58 aa5.11□□□□□ -1.59
PDGFC-204ENST00000504672 SPANXB1Q9NS25 103 aaPredicted RBP5.11□□□□□ -1.59
PDGFC-204ENST00000504672 SPANXCQ9NY87 97 aa5.11□□□□□ -1.59
PDGFC-204ENST00000504672 HIGD1BQ9P298 99 aa5.11□□□□□ -1.59
PDGFC-204ENST00000504672 TP73-AS1Q9UF72 201 aa5.11□□□□□ -1.59
PDGFC-204ENST00000504672 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
PDGFC-204ENST00000504672 ADAMTSL4-AS1Q5T5F5 129 aa5.1□□□□□ -1.59
PDGFC-204ENST00000504672 SND1-IT1Q9HBX3 110 aa5.1□□□□□ -1.59
PDGFC-204ENST00000504672 NDUFC2O95298 119 aa5.09□□□□□ -1.59
PDGFC-204ENST00000504672 SMIM13P0DJ93 91 aa5.09□□□□□ -1.59
PDGFC-204ENST00000504672 VPREB1P12018 145 aa5.09□□□□□ -1.59
PDGFC-204ENST00000504672 IFITM1P13164 125 aa5.09□□□□□ -1.59
PDGFC-204ENST00000504672 UBE2AP49459 152 aa5.09□□□□□ -1.59
PDGFC-204ENST00000504672 FAM229BQ4G0N7 80 aa5.09□□□□□ -1.59
PDGFC-204ENST00000504672 SPATA45Q537H7 98 aa5.09□□□□□ -1.59
PDGFC-204ENST00000504672 MEIG1Q5JSS6 88 aa5.09□□□□□ -1.59
PDGFC-204ENST00000504672 MRPL55Q7Z7F7 128 aaKnown RBP5.09□□□□□ -1.59
PDGFC-204ENST00000504672 C3orf22Q8N5N4 141 aa5.09□□□□□ -1.59
PDGFC-204ENST00000504672 MIR7-3HGQ8N6C7 128 aa5.09□□□□□ -1.59
PDGFC-204ENST00000504672 LINC00167Q96N53 147 aa5.09□□□□□ -1.59
PDGFC-204ENST00000504672 TMEM238C9JI98 176 aa5.08□□□□□ -1.6
PDGFC-204ENST00000504672 PCP4P48539 62 aa5.08□□□□□ -1.6
PDGFC-204ENST00000504672 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
PDGFC-204ENST00000504672 SOSTDC1Q6X4U4 206 aa5.08□□□□□ -1.6
PDGFC-204ENST00000504672 C2orf91Q6ZV80 131 aa5.08□□□□□ -1.6
PDGFC-204ENST00000504672 Q8NDZ9 215 aa5.08□□□□□ -1.6
PDGFC-204ENST00000504672 PAM16Q9Y3D7 125 aa5.08□□□□□ -1.6
PDGFC-204ENST00000504672 TRBV10-2A0A0K0K1G8 114 aa5.07□□□□□ -1.6
PDGFC-204ENST00000504672 PFN2P35080 140 aa5.07□□□□□ -1.6
PDGFC-204ENST00000504672 LINC00158P58513 81 aa5.07□□□□□ -1.6
PDGFC-204ENST00000504672 KRTAP10-6P60371 365 aaPredicted RBP5.07□□□□□ -1.6
PDGFC-204ENST00000504672 SLC25A34Q6PIV7 304 aa5.07□□□□□ -1.6
PDGFC-204ENST00000504672 KRTAP13-1Q8IUC0 172 aa5.07□□□□□ -1.6
PDGFC-204ENST00000504672 LINC00308Q8TCZ7 52 aa5.07□□□□□ -1.6
PDGFC-204ENST00000504672 TRIAP1O43715 76 aa5.06□□□□□ -1.6
PDGFC-204ENST00000504672 CFC1BP0CG36 223 aa5.06□□□□□ -1.6
PDGFC-204ENST00000504672 S100A12P80511 92 aa5.06□□□□□ -1.6
PDGFC-204ENST00000504672 FP248Q71RG6 208 aaPredicted RBP5.06□□□□□ -1.6
PDGFC-204ENST00000504672 LINC00518Q8N0U6 118 aa5.06□□□□□ -1.6
PDGFC-204ENST00000504672 COPS9Q8WXC6 57 aa5.06□□□□□ -1.6
PDGFC-204ENST00000504672 RPL24P83731 157 aaKnown RBP5.05□□□□□ -1.6
PDGFC-204ENST00000504672 TAL2Q16559 108 aa5.05□□□□□ -1.6
PDGFC-204ENST00000504672 C14orf144Q96I85 54 aa5.05□□□□□ -1.6
PDGFC-204ENST00000504672 SSPOA2VEC9 5147 aa5.05□□□□□ -1.6
PDGFC-204ENST00000504672 USH2AO75445 5202 aa5.04□□□□□ -1.6
PDGFC-204ENST00000504672 PRLHP81277 87 aa5.04□□□□□ -1.6
PDGFC-204ENST00000504672 SCGB1D4Q6XE38 83 aa5.04□□□□□ -1.6
PDGFC-204ENST00000504672 DAND5Q8N907 189 aa5.04□□□□□ -1.6
PDGFC-204ENST00000504672 UQCR10Q9UDW1 63 aa5.04□□□□□ -1.6
PDGFC-204ENST00000504672 IGKV2-28A0A075B6P5 120 aa5.03□□□□□ -1.6
PDGFC-204ENST00000504672 IGKV2D-28P01615 120 aa5.03□□□□□ -1.6
PDGFC-204ENST00000504672 IGLV6-57P01721 117 aa5.03□□□□□ -1.6
PDGFC-204ENST00000504672 C12orf57Q99622 126 aa5.03□□□□□ -1.6
PDGFC-204ENST00000504672 MIEN1Q9BRT3 115 aa5.03□□□□□ -1.6
PDGFC-204ENST00000504672 A0A0U1RRA0 63 aa5.02□□□□□ -1.61
PDGFC-204ENST00000504672 M0R2T5 61 aa5.02□□□□□ -1.61
PDGFC-204ENST00000504672 M0R378 163 aa5.02□□□□□ -1.61
PDGFC-204ENST00000504672 SPRR1AP35321 89 aa5.02□□□□□ -1.61
PDGFC-204ENST00000504672 CTAG1AP78358 180 aa5.02□□□□□ -1.61
PDGFC-204ENST00000504672 SPAG11AQ6PDA7 123 aa5.02□□□□□ -1.61
PDGFC-204ENST00000504672 KCNQ1DNQ9H478 68 aa5.02□□□□□ -1.61
PDGFC-204ENST00000504672 KRTAP4-16G5E9R7 235 aaPredicted RBP5.01□□□□□ -1.61
PDGFC-204ENST00000504672 FAM19A1Q7Z5A9 133 aa5.01□□□□□ -1.61
PDGFC-204ENST00000504672 MUSTN1Q8IVN3 82 aa5.01□□□□□ -1.61
PDGFC-204ENST00000504672 A0A1B0GWB2 263 aa5□□□□□ -1.61
PDGFC-204ENST00000504672 HSD52Q0P140 79 aa4.99□□□□□ -1.61
PDGFC-204ENST00000504672 NKAPP1Q8N9T2 125 aa4.99□□□□□ -1.61
PDGFC-204ENST00000504672 Q8NBF4 154 aa4.99□□□□□ -1.61
PDGFC-204ENST00000504672 IGLV8-61A0A075B6I0 122 aa4.98□□□□□ -1.61
PDGFC-204ENST00000504672 A4D1N5 150 aa4.98□□□□□ -1.61
PDGFC-204ENST00000504672 PRYO14603 147 aa4.98□□□□□ -1.61
PDGFC-204ENST00000504672 PCOTHQ58A44 107 aa4.98□□□□□ -1.61
PDGFC-204ENST00000504672 CEND1Q8N111 149 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms