RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 NIPBLQ6KC79 2804 aaeCLIP2.56□□□□□ -2
PCDH11X-208ENST00000504220 A0A087WYN8 130 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 LINC00959A0A1B0GUT2 108 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 LINC00846Q9NV44 126 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 CD164L2Q6UWJ8 174 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 Q6ZSN1 163 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 SYCNQ0VAF6 134 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 NTM-AS1Q6ZSK4 140 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 FAM218AQ96MZ4 157 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 ANK3Q12955 4377 aaKnown RBP2.56□□□□□ -2
PCDH11X-208ENST00000504220 HIVEP1P15822 2718 aa2.56□□□□□ -2
PCDH11X-208ENST00000504220 PDE6GP18545 87 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 LINC00313P59037 77 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 CASC2Q6XLA1 102 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 LINC00208Q96KT6 92 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 CDC42SE2Q9NRR3 84 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 SMIM1B2RUZ4 78 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 MRPS36P82909 103 aaKnown RBP2.55□□□□□ -2
PCDH11X-208ENST00000504220 Q8N3U1 123 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 FRAS1Q86XX4 4008 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 IGLV9-49A0A0B4J1Y8 123 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 Q5VV11 94 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 NBEAL2Q6ZNJ1 2754 aa2.55□□□□□ -2
PCDH11X-208ENST00000504220 CR1P17927 2039 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 TRBV10-3A0A0K0K1G6 114 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 ODF3L2Q3SX64 289 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 PCOTHQ58A44 107 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 RETNLBQ9BQ08 111 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 CNFNQ9BYD5 112 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 LYSTQ99698 3801 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 TRBV6-4A0A1B0GX49 114 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 ZNF73O43830 326 aaPredicted RBP2.54□□□□□ -2
PCDH11X-208ENST00000504220 MIFP14174 115 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 KPRPQ5T749 579 aaPredicted RBP2.54□□□□□ -2
PCDH11X-208ENST00000504220 Q6YL49 198 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 Q8N6K4 173 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 LINC01006Q8NI28 216 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 NSD1Q96L73 2696 aaPredicted RBP2.54□□□□□ -2
PCDH11X-208ENST00000504220 FBN3Q75N90 2809 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 Q6JHZ5 121 aa2.54□□□□□ -2
PCDH11X-208ENST00000504220 LINC01547P58512 204 aaPredicted RBP2.53□□□□□ -2
PCDH11X-208ENST00000504220 COX8CQ7Z4L0 72 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 A0A096LNT2 108 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 hDV103S1A0JD37 113 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 ZNF702PQ9H963 129 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 NF1P21359 2839 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 B9D2Q9BPU9 175 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 CHCHD7Q9BUK0 85 aa2.53□□□□□ -2
PCDH11X-208ENST00000504220 TRAV10A0A0B4J240 114 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 LINC00575Q6W349 94 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 SPINK1P00995 79 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 KRTAP1-1Q07627 177 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 Q6ZVQ6 151 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 Q8N814 137 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 ATP5EP2Q5VTU8 51 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 PRR15LQ9BU68 103 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 ANK2Q01484 3957 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 LCE6AA0A183 80 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 LYRM9A8MSI8 78 aa2.52□□□□□ -2.01
PCDH11X-208ENST00000504220 A0A087WSZ3 146 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 IGLV1-40P01703 118 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 C1orf137Q5JT78 98 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 ADM2Q7Z4H4 148 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 TENM2Q9NT68 2774 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 TRAV7A0A075B6U4 112 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 A0A0A0MQY5 61 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 TRAV22A0A0B4J277 110 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 MRGPRG-AS1Q2M3A8 158 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 X6R8D5 127 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 H3BQ85 93 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 C11orf72Q8NBR9 251 aa2.51□□□□□ -2.01
PCDH11X-208ENST00000504220 SERTAD4-AS1Q5TG53 156 aa2.5□□□□□ -2.01
PCDH11X-208ENST00000504220 Q8IZM0 81 aa2.5□□□□□ -2.01
PCDH11X-208ENST00000504220 LELP1Q5T871 98 aa2.5□□□□□ -2.01
PCDH11X-208ENST00000504220 IGHV6-1A0A0B4J1U7 121 aa2.5□□□□□ -2.01
PCDH11X-208ENST00000504220 TMEM254Q8TBM7 123 aa2.5□□□□□ -2.01
PCDH11X-208ENST00000504220 PLAC8Q9NZF1 115 aa2.5□□□□□ -2.01
PCDH11X-208ENST00000504220 NDUFC1O43677 76 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 PRLHP81277 87 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 ESRGQ1W209 222 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 VPS13DQ5THJ4 4388 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 PRYO14603 147 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 KIAA0087Q14695 138 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 KIF25-AS1Q9Y6Z4 181 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 CIRBP-AS1Q8TBR5 109 aa2.49□□□□□ -2.01
PCDH11X-208ENST00000504220 LINC00315P59091 139 aa2.48□□□□□ -2.01
PCDH11X-208ENST00000504220 MUC7Q8TAX7 377 aa2.48□□□□□ -2.01
PCDH11X-208ENST00000504220 ZCCHC13Q8WW36 166 aaKnown RBP2.48□□□□□ -2.01
PCDH11X-208ENST00000504220 BCE1O60756 84 aa2.48□□□□□ -2.01
PCDH11X-208ENST00000504220 C10orf25Q5T742 122 aa2.48□□□□□ -2.01
PCDH11X-208ENST00000504220 DHRS4-AS1Q9P1J3 65 aa2.48□□□□□ -2.01
PCDH11X-208ENST00000504220 LY6G6CO95867 125 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 LINC00612Q8N6U2 182 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 MXRA5Q9NR99 2828 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 MOBPQ13875 183 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 DNAH1Q9P2D7 4330 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 P0C880 135 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 KRTAP24-1Q3LI83 254 aa2.47□□□□□ -2.01
PCDH11X-208ENST00000504220 SMIM29Q86T20 159 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms