RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 HRCT1Q6UXD1 115 aa7.9□□□□□ -1.14
SEC61A1-207ENST00000498837 SERF1AO75920 110 aa7.89□□□□□ -1.15
SEC61A1-207ENST00000498837 IGLV6-57P01721 117 aa7.89□□□□□ -1.15
SEC61A1-207ENST00000498837 TSPEAR-AS2P59090 65 aa7.89□□□□□ -1.15
SEC61A1-207ENST00000498837 M0R2T5 61 aa7.88□□□□□ -1.15
SEC61A1-207ENST00000498837 JOSD1Q15040 202 aaPredicted RBP7.88□□□□□ -1.15
SEC61A1-207ENST00000498837 S100A7L2Q5SY68 101 aa7.88□□□□□ -1.15
SEC61A1-207ENST00000498837 SPANXB1Q9NS25 103 aaPredicted RBP7.88□□□□□ -1.15
SEC61A1-207ENST00000498837 TRAV23DV6A0A075B6W5 121 aa7.87□□□□□ -1.15
SEC61A1-207ENST00000498837 LIMD2Q9BT23 127 aa7.87□□□□□ -1.15
SEC61A1-207ENST00000498837 ZNF73O43830 326 aaPredicted RBP7.85□□□□□ -1.15
SEC61A1-207ENST00000498837 LEPROTL1O95214 131 aa7.85□□□□□ -1.15
SEC61A1-207ENST00000498837 H0Y8G0 127 aa7.84□□□□□ -1.15
SEC61A1-207ENST00000498837 LEPROTO15243 131 aa7.84□□□□□ -1.15
SEC61A1-207ENST00000498837 NDUFC2O95298 119 aa7.84□□□□□ -1.15
SEC61A1-207ENST00000498837 MIEN1Q9BRT3 115 aa7.84□□□□□ -1.15
SEC61A1-207ENST00000498837 EIF4EBP3O60516 100 aaPredicted RBP7.83□□□□□ -1.16
SEC61A1-207ENST00000498837 C5orf52A6NGY3 159 aa7.82□□□□□ -1.16
SEC61A1-207ENST00000498837 SPRR1BP22528 89 aa7.82□□□□□ -1.16
SEC61A1-207ENST00000498837 NPC2P61916 151 aa7.82□□□□□ -1.16
SEC61A1-207ENST00000498837 SOSTDC1Q6X4U4 206 aa7.82□□□□□ -1.16
SEC61A1-207ENST00000498837 J3QQQ9 107 aa7.81□□□□□ -1.16
SEC61A1-207ENST00000498837 FABP4P15090 132 aa7.81□□□□□ -1.16
SEC61A1-207ENST00000498837 COX6B2Q6YFQ2 88 aa7.81□□□□□ -1.16
SEC61A1-207ENST00000498837 HSPB8Q9UJY1 196 aa7.81□□□□□ -1.16
SEC61A1-207ENST00000498837 PLNP26678 52 aa7.8□□□□□ -1.16
SEC61A1-207ENST00000498837 PMCHL2Q9BQD1 86 aa7.8□□□□□ -1.16
SEC61A1-207ENST00000498837 H7C2G1 150 aa7.78□□□□□ -1.16
SEC61A1-207ENST00000498837 DPM2O94777 84 aa7.78□□□□□ -1.16
SEC61A1-207ENST00000498837 HINT1P49773 126 aaPredicted RBP7.78□□□□□ -1.16
SEC61A1-207ENST00000498837 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
SEC61A1-207ENST00000498837 SLC25A34Q6PIV7 304 aa7.78□□□□□ -1.16
SEC61A1-207ENST00000498837 LAMTOR3Q9UHA4 124 aa7.78□□□□□ -1.16
SEC61A1-207ENST00000498837 KRTAP9-7A8MTY7 169 aa7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 HIST1H2BKO60814 126 aa7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 IGKCP01834 107 aa7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 HIST1H2BJP06899 126 aa7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 HIST1H2BOP23527 126 aa7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 HIST1H2BBP33778 126 aa7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 HIST1H2BDP58876 126 aa7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 RPL37P61927 97 aaKnown RBP7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 HIST1H2BCP62807 126 aa7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 HIST2H2BEQ16778 126 aa7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 HIST1H2BHQ93079 126 aa7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 HIST1H2BNQ99877 126 aa7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 HIST1H2BMQ99879 126 aa7.77□□□□□ -1.17
SEC61A1-207ENST00000498837 LGALS3P17931 250 aaKnown RBP7.76□□□□□ -1.17
SEC61A1-207ENST00000498837 NMUP48645 174 aa7.76□□□□□ -1.17
SEC61A1-207ENST00000498837 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.75□□□□□ -1.17
SEC61A1-207ENST00000498837 CD164Q04900 197 aa7.75□□□□□ -1.17
SEC61A1-207ENST00000498837 Q1RN00 199 aa7.75□□□□□ -1.17
SEC61A1-207ENST00000498837 C1orf195Q5TG92 126 aa7.75□□□□□ -1.17
SEC61A1-207ENST00000498837 DHRS4-AS1Q9P1J3 65 aa7.75□□□□□ -1.17
SEC61A1-207ENST00000498837 A0A0J9YXY3 114 aa7.73□□□□□ -1.17
SEC61A1-207ENST00000498837 HERVK_113P61574 105 aa7.73□□□□□ -1.17
SEC61A1-207ENST00000498837 DEFB105AQ8NG35 78 aa7.73□□□□□ -1.17
SEC61A1-207ENST00000498837 OR13C6PQ8NH95 151 aa7.73□□□□□ -1.17
SEC61A1-207ENST00000498837 PRO1933Q9H354 126 aa7.73□□□□□ -1.17
SEC61A1-207ENST00000498837 A0A0G2JQZ4 141 aa7.72□□□□□ -1.17
SEC61A1-207ENST00000498837 SYS1-DBNDD2H3BUS1 97 aa7.72□□□□□ -1.17
SEC61A1-207ENST00000498837 TAL2Q16559 108 aa7.72□□□□□ -1.17
SEC61A1-207ENST00000498837 Q5XG85 94 aa7.72□□□□□ -1.17
SEC61A1-207ENST00000498837 CBY1Q9Y3M2 126 aa7.72□□□□□ -1.17
SEC61A1-207ENST00000498837 E9PLD3 99 aa7.71□□□□□ -1.18
SEC61A1-207ENST00000498837 SSPOA2VEC9 5147 aa7.69□□□□□ -1.18
SEC61A1-207ENST00000498837 AKR1D1P51857 326 aa7.69□□□□□ -1.18
SEC61A1-207ENST00000498837 ELOF1P60002 83 aaKnown RBP7.69□□□□□ -1.18
SEC61A1-207ENST00000498837 LINC01545Q5VT33 79 aa7.69□□□□□ -1.18
SEC61A1-207ENST00000498837 LINC00308Q8TCZ7 52 aa7.69□□□□□ -1.18
SEC61A1-207ENST00000498837 COX7BP24311 80 aa7.68□□□□□ -1.18
SEC61A1-207ENST00000498837 COA6Q5JTJ3 125 aaKnown RBP7.68□□□□□ -1.18
SEC61A1-207ENST00000498837 SMIM29Q86T20 159 aa7.68□□□□□ -1.18
SEC61A1-207ENST00000498837 SPANXCQ9NY87 97 aa7.68□□□□□ -1.18
SEC61A1-207ENST00000498837 USH2AO75445 5202 aa7.68□□□□□ -1.18
SEC61A1-207ENST00000498837 TEX49A0A1B0GTD5 131 aa7.67□□□□□ -1.18
SEC61A1-207ENST00000498837 C6orf99Q4VX62 202 aa7.67□□□□□ -1.18
SEC61A1-207ENST00000498837 PET117Q6UWS5 81 aa7.67□□□□□ -1.18
SEC61A1-207ENST00000498837 LITAFQ99732 161 aa7.67□□□□□ -1.18
SEC61A1-207ENST00000498837 C3orf79P0CE67 100 aa7.66□□□□□ -1.18
SEC61A1-207ENST00000498837 Q6Q795 121 aa7.66□□□□□ -1.18
SEC61A1-207ENST00000498837 SPANXDQ9BXN6 97 aa7.65□□□□□ -1.18
SEC61A1-207ENST00000498837 TTTY13Q9BZ97 58 aa7.63□□□□□ -1.19
SEC61A1-207ENST00000498837 TIMM17BO60830 172 aa7.61□□□□□ -1.19
SEC61A1-207ENST00000498837 IGLV5-48A0A075B6I7 105 aa7.6□□□□□ -1.19
SEC61A1-207ENST00000498837 KRTDAPP60985 99 aa7.6□□□□□ -1.19
SEC61A1-207ENST00000498837 KRTAP9-8Q9BYQ0 159 aa7.6□□□□□ -1.19
SEC61A1-207ENST00000498837 ZNF815PA8K554 130 aa7.59□□□□□ -1.19
SEC61A1-207ENST00000498837 LINC00518Q8N0U6 118 aa7.59□□□□□ -1.19
SEC61A1-207ENST00000498837 TRBV7-6A0A0J9YX20 115 aa7.58□□□□□ -1.2
SEC61A1-207ENST00000498837 TCL1BO95988 128 aa7.58□□□□□ -1.2
SEC61A1-207ENST00000498837 CFC1P0CG37 223 aa7.57□□□□□ -1.2
SEC61A1-207ENST00000498837 A0A1B0GWB2 263 aa7.56□□□□□ -1.2
SEC61A1-207ENST00000498837 ANKRD39Q53RE8 183 aa7.56□□□□□ -1.2
SEC61A1-207ENST00000498837 ATP11AUNQ6ZP68 121 aa7.55□□□□□ -1.2
SEC61A1-207ENST00000498837 PCP2Q8IVA1 136 aa7.55□□□□□ -1.2
SEC61A1-207ENST00000498837 FCGBPQ9Y6R7 5405 aaPredicted RBP7.55□□□□□ -1.2
SEC61A1-207ENST00000498837 ATOH7Q8N100 152 aa7.54□□□□□ -1.2
SEC61A1-207ENST00000498837 C20orf202A1L168 122 aa7.53□□□□□ -1.2
SEC61A1-207ENST00000498837 OBSCN-AS1Q96MR7 158 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms