RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 SMIM13P0DJ93 91 aa3.16□□□□□ -1.9
FXN-205ENST00000498653 RPL18AQ02543 176 aaKnown RBP3.16□□□□□ -1.9
FXN-205ENST00000498653 COX17Q14061 63 aa3.16□□□□□ -1.9
FXN-205ENST00000498653 SLC25A34Q6PIV7 304 aa3.16□□□□□ -1.9
FXN-205ENST00000498653 BOD1L2Q8IYS8 172 aa3.16□□□□□ -1.9
FXN-205ENST00000498653 C14orf144Q96I85 54 aa3.16□□□□□ -1.9
FXN-205ENST00000498653 C12orf57Q99622 126 aa3.16□□□□□ -1.9
FXN-205ENST00000498653 IGKV2D-30A0A075B6S6 120 aa3.15□□□□□ -1.91
FXN-205ENST00000498653 TMEM238C9JI98 176 aa3.15□□□□□ -1.91
FXN-205ENST00000498653 NDUFC2-KCTD14E9PQ53 114 aa3.15□□□□□ -1.91
FXN-205ENST00000498653 GAGE2BQ13066 116 aa3.15□□□□□ -1.91
FXN-205ENST00000498653 GAGE2EQ4V326 116 aa3.15□□□□□ -1.91
FXN-205ENST00000498653 SDIM1Q6ZPB5 146 aa3.15□□□□□ -1.91
FXN-205ENST00000498653 LINC00518Q8N0U6 118 aa3.15□□□□□ -1.91
FXN-205ENST00000498653 PRR26Q8N8Z3 221 aa3.15□□□□□ -1.91
FXN-205ENST00000498653 DPH3Q96FX2 82 aa3.15□□□□□ -1.91
FXN-205ENST00000498653 GAGE2DQ9UEU5 116 aa3.15□□□□□ -1.91
FXN-205ENST00000498653 A0A096LNI7 61 aa3.14□□□□□ -1.91
FXN-205ENST00000498653 IGKV2-24A0A0C4DH68 120 aa3.14□□□□□ -1.91
FXN-205ENST00000498653 SRSF9Q13242 221 aaKnown RBP eCLIP3.14□□□□□ -1.91
FXN-205ENST00000498653 Q6ZRP5 223 aa3.14□□□□□ -1.91
FXN-205ENST00000498653 MIR7-3HGQ8N6C7 128 aa3.14□□□□□ -1.91
FXN-205ENST00000498653 PRO1933Q9H354 126 aa3.14□□□□□ -1.91
FXN-205ENST00000498653 LINC00474Q9P2X8 69 aa3.14□□□□□ -1.91
FXN-205ENST00000498653 UQCR10Q9UDW1 63 aa3.14□□□□□ -1.91
FXN-205ENST00000498653 TSTD3H0UI37 97 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 CHTF8P0CG12 524 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 CRYGAP11844 174 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 IFITM1P13164 125 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 ADAMTSL4-AS1Q5T5F5 129 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 REG3GQ6UW15 175 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 Q6ZVH6 145 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 DAND5Q8N907 189 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 COPS9Q8WXC6 57 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 HIST1H4GQ99525 98 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 LITAFQ99732 161 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 MIEN1Q9BRT3 115 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 SPANXDQ9BXN6 97 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 SND1-IT1Q9HBX3 110 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 XAGE1AQ9HD64 81 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 SPANXB1Q9NS25 103 aaPredicted RBP3.13□□□□□ -1.91
FXN-205ENST00000498653 SPANXCQ9NY87 97 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 HIGD1BQ9P298 99 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 TP73-AS1Q9UF72 201 aa3.13□□□□□ -1.91
FXN-205ENST00000498653 NPC2P61916 151 aa3.12□□□□□ -1.91
FXN-205ENST00000498653 RPL24P83731 157 aaKnown RBP3.12□□□□□ -1.91
FXN-205ENST00000498653 TAL2Q16559 108 aa3.12□□□□□ -1.91
FXN-205ENST00000498653 C9orf129Q5T035 196 aaKnown RBP3.12□□□□□ -1.91
FXN-205ENST00000498653 C2orf91Q6ZV80 131 aa3.12□□□□□ -1.91
FXN-205ENST00000498653 LINC00308Q8TCZ7 52 aa3.12□□□□□ -1.91
FXN-205ENST00000498653 SPACA4Q8TDM5 124 aa3.12□□□□□ -1.91
FXN-205ENST00000498653 LOC107984156A0A0G2JMH3 177 aa3.11□□□□□ -1.91
FXN-205ENST00000498653 SOSTDC1Q6X4U4 206 aa3.11□□□□□ -1.91
FXN-205ENST00000498653 FAM19A5Q7Z5A7 132 aaPredicted RBP3.11□□□□□ -1.91
FXN-205ENST00000498653 MUSTN1Q8IVN3 82 aa3.11□□□□□ -1.91
FXN-205ENST00000498653 ARL17AQ8IVW1 177 aa3.11□□□□□ -1.91
FXN-205ENST00000498653 NKAPP1Q8N9T2 125 aa3.11□□□□□ -1.91
FXN-205ENST00000498653 PPDPFQ9H3Y8 114 aa3.11□□□□□ -1.91
FXN-205ENST00000498653 IGLV5-37A0A075B6J1 123 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 A0A087WYN8 130 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 A0A1W2PNN7 141 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 FAM168BA1KXE4 195 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 M0R378 163 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 NCR3O14931 201 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 NDUFC2O95298 119 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 VPREB1P12018 145 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 HSD52Q0P140 79 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 LBHQ53QV2 105 aaPredicted RBP3.1□□□□□ -1.91
FXN-205ENST00000498653 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 PLAC8Q9NZF1 115 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 C22orf24Q9Y442 160 aa3.1□□□□□ -1.91
FXN-205ENST00000498653 TRBV10-2A0A0K0K1G8 114 aa3.09□□□□□ -1.91
FXN-205ENST00000498653 M0QXV9 152 aa3.09□□□□□ -1.91
FXN-205ENST00000498653 CTAG1AP78358 180 aa3.09□□□□□ -1.91
FXN-205ENST00000498653 MRPL55Q7Z7F7 128 aaKnown RBP3.09□□□□□ -1.91
FXN-205ENST00000498653 CEND1Q8N111 149 aa3.09□□□□□ -1.91
FXN-205ENST00000498653 Q8NDZ9 215 aa3.09□□□□□ -1.91
FXN-205ENST00000498653 A4D1N5 150 aa3.08□□□□□ -1.92
FXN-205ENST00000498653 M0R143 59 aa3.08□□□□□ -1.92
FXN-205ENST00000498653 DDTP30046 118 aa3.08□□□□□ -1.92
FXN-205ENST00000498653 UBE2BP63146 152 aa3.08□□□□□ -1.92
FXN-205ENST00000498653 PRR3P79522 188 aaKnown RBP3.08□□□□□ -1.92
FXN-205ENST00000498653 S100A7L2Q5SY68 101 aa3.08□□□□□ -1.92
FXN-205ENST00000498653 PHF5AQ7RTV0 110 aaKnown RBP3.08□□□□□ -1.92
FXN-205ENST00000498653 KRTAP7-1Q8IUC3 87 aa3.08□□□□□ -1.92
FXN-205ENST00000498653 OR13C6PQ8NH95 151 aa3.08□□□□□ -1.92
FXN-205ENST00000498653 C7orf33Q8WU49 177 aa3.08□□□□□ -1.92
FXN-205ENST00000498653 LINC00167Q96N53 147 aa3.08□□□□□ -1.92
FXN-205ENST00000498653 IGKV2-28A0A075B6P5 120 aa3.07□□□□□ -1.92
FXN-205ENST00000498653 TRAV13-2A0A0B4J235 113 aa3.07□□□□□ -1.92
FXN-205ENST00000498653 A6NDN8 102 aa3.07□□□□□ -1.92
FXN-205ENST00000498653 RPL37AP8A6NKH3 93 aa3.07□□□□□ -1.92
FXN-205ENST00000498653 IGKV2D-28P01615 120 aa3.07□□□□□ -1.92
FXN-205ENST00000498653 HINT1P49773 126 aaPredicted RBP3.07□□□□□ -1.92
FXN-205ENST00000498653 FXYD2P54710 66 aa3.07□□□□□ -1.92
FXN-205ENST00000498653 BVES-AS1Q5T3Y7 98 aa3.07□□□□□ -1.92
FXN-205ENST00000498653 SPINK6Q6UWN8 80 aa3.07□□□□□ -1.92
FXN-205ENST00000498653 RAB37Q96AX2 223 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms