RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 COX7BP24311 80 aa6.63□□□□□ -1.35
HDAC3-214ENST00000495485 Q8N814 137 aa6.63□□□□□ -1.35
HDAC3-214ENST00000495485 PRYO14603 147 aa6.62□□□□□ -1.35
HDAC3-214ENST00000495485 INAFM2P0DMQ5 153 aa6.62□□□□□ -1.35
HDAC3-214ENST00000495485 LINC00575Q6W349 94 aa6.62□□□□□ -1.35
HDAC3-214ENST00000495485 C9orf163Q8N9P6 203 aa6.62□□□□□ -1.35
HDAC3-214ENST00000495485 Q8NDZ9 215 aa6.62□□□□□ -1.35
HDAC3-214ENST00000495485 FAM218AQ96MZ4 157 aa6.62□□□□□ -1.35
HDAC3-214ENST00000495485 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-214ENST00000495485 A0A087WYN8 130 aa6.61□□□□□ -1.35
HDAC3-214ENST00000495485 LRCOL1A6NCL2 159 aa6.61□□□□□ -1.35
HDAC3-214ENST00000495485 VPS25Q9BRG1 176 aa6.61□□□□□ -1.35
HDAC3-214ENST00000495485 KCNQ1DNQ9H478 68 aa6.61□□□□□ -1.35
HDAC3-214ENST00000495485 DNAH5Q8TE73 4624 aa6.61□□□□□ -1.35
HDAC3-214ENST00000495485 DYNC1H1Q14204 4646 aaKnown RBP6.61□□□□□ -1.35
HDAC3-214ENST00000495485 MRPL55Q7Z7F7 128 aaKnown RBP6.6□□□□□ -1.35
HDAC3-214ENST00000495485 LINC00167Q96N53 147 aa6.6□□□□□ -1.35
HDAC3-214ENST00000495485 C22orf24Q9Y442 160 aa6.6□□□□□ -1.35
HDAC3-214ENST00000495485 A0A1B0GVY2 172 aa6.59□□□□□ -1.35
HDAC3-214ENST00000495485 JMJD7-PLA2G4BH0Y9G9 81 aa6.59□□□□□ -1.35
HDAC3-214ENST00000495485 ELOF1P60002 83 aaKnown RBP6.59□□□□□ -1.35
HDAC3-214ENST00000495485 TNP2Q05952 138 aa6.59□□□□□ -1.35
HDAC3-214ENST00000495485 C21orf62-AS1Q17RA5 79 aa6.59□□□□□ -1.35
HDAC3-214ENST00000495485 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-214ENST00000495485 C7orf33Q8WU49 177 aa6.59□□□□□ -1.35
HDAC3-214ENST00000495485 EPPK1P58107 5090 aaKnown RBP6.59□□□□□ -1.35
HDAC3-214ENST00000495485 IGLV1-50A0A075B6I6 118 aa6.58□□□□□ -1.36
HDAC3-214ENST00000495485 A0A087WTM6 91 aa6.58□□□□□ -1.36
HDAC3-214ENST00000495485 ETDCA0A1B0GVM5 59 aa6.58□□□□□ -1.36
HDAC3-214ENST00000495485 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
HDAC3-214ENST00000495485 FAM19A5Q7Z5A7 132 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-214ENST00000495485 DHRS4-AS1Q9P1J3 65 aa6.58□□□□□ -1.36
HDAC3-214ENST00000495485 LRP1BQ9NZR2 4599 aa6.58□□□□□ -1.36
HDAC3-214ENST00000495485 A0A096LNI7 61 aa6.57□□□□□ -1.36
HDAC3-214ENST00000495485 ACYP1P07311 99 aa6.57□□□□□ -1.36
HDAC3-214ENST00000495485 DPH3Q96FX2 82 aa6.57□□□□□ -1.36
HDAC3-214ENST00000495485 IGKV2-24A0A0C4DH68 120 aa6.56□□□□□ -1.36
HDAC3-214ENST00000495485 TEX49A0A1B0GTD5 131 aa6.56□□□□□ -1.36
HDAC3-214ENST00000495485 BIRC6Q9NR09 4857 aa6.55□□□□□ -1.36
HDAC3-214ENST00000495485 FAM240AA0A1B0GVK7 77 aa6.54□□□□□ -1.36
HDAC3-214ENST00000495485 FAM168BA1KXE4 195 aa6.54□□□□□ -1.36
HDAC3-214ENST00000495485 REG3GQ6UW15 175 aa6.54□□□□□ -1.36
HDAC3-214ENST00000495485 SDIM1Q6ZPB5 146 aa6.54□□□□□ -1.36
HDAC3-214ENST00000495485 LINC00528Q8N1L1 170 aa6.54□□□□□ -1.36
HDAC3-214ENST00000495485 RPL37AP8A6NKH3 93 aa6.53□□□□□ -1.36
HDAC3-214ENST00000495485 PDE6GP18545 87 aa6.53□□□□□ -1.36
HDAC3-214ENST00000495485 SPRR1AP35321 89 aa6.53□□□□□ -1.36
HDAC3-214ENST00000495485 UBE2BP63146 152 aa6.53□□□□□ -1.36
HDAC3-214ENST00000495485 Q6ZQY7 126 aa6.53□□□□□ -1.36
HDAC3-214ENST00000495485 LAMTOR3Q9UHA4 124 aa6.53□□□□□ -1.36
HDAC3-214ENST00000495485 DNAH8Q96JB1 4490 aa6.53□□□□□ -1.36
HDAC3-214ENST00000495485 Q6ZRX8 168 aa6.52□□□□□ -1.37
HDAC3-214ENST00000495485 IGLV5-52A0A0A0MRZ9 124 aa6.51□□□□□ -1.37
HDAC3-214ENST00000495485 RBM3P98179 157 aaKnown RBP6.51□□□□□ -1.37
HDAC3-214ENST00000495485 OBSCN-AS1Q96MR7 158 aa6.51□□□□□ -1.37
HDAC3-214ENST00000495485 B5MCH6 92 aa6.5□□□□□ -1.37
HDAC3-214ENST00000495485 SIGMAR1Q99720 223 aa6.5□□□□□ -1.37
HDAC3-214ENST00000495485 A0A1W2PNN7 141 aa6.49□□□□□ -1.37
HDAC3-214ENST00000495485 DSCR8Q96T75 97 aa6.49□□□□□ -1.37
HDAC3-214ENST00000495485 APOBP04114 4563 aaKnown RBP6.49□□□□□ -1.37
HDAC3-214ENST00000495485 GAGE2AQ6NT46 116 aa6.48□□□□□ -1.37
HDAC3-214ENST00000495485 FAM19A1Q7Z5A9 133 aa6.48□□□□□ -1.37
HDAC3-214ENST00000495485 KRTAP7-1Q8IUC3 87 aa6.48□□□□□ -1.37
HDAC3-214ENST00000495485 SPACA4Q8TDM5 124 aa6.48□□□□□ -1.37
HDAC3-214ENST00000495485 KRTAP4-16G5E9R7 235 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-214ENST00000495485 H0Y9J4 135 aa6.47□□□□□ -1.37
HDAC3-214ENST00000495485 CDK2AP2O75956 126 aa6.47□□□□□ -1.37
HDAC3-214ENST00000495485 KRTAP10-2P60368 255 aa6.47□□□□□ -1.37
HDAC3-214ENST00000495485 C14orf132Q9NPU4 83 aa6.47□□□□□ -1.37
HDAC3-214ENST00000495485 CCKP06307 115 aa6.46□□□□□ -1.38
HDAC3-214ENST00000495485 CHTF8P0CG12 524 aa6.46□□□□□ -1.38
HDAC3-214ENST00000495485 NDUFV3P56181 108 aaKnown RBP6.46□□□□□ -1.38
HDAC3-214ENST00000495485 LOC110117498A0A087WWA1 95 aa6.45□□□□□ -1.38
HDAC3-214ENST00000495485 EPM2AB3EWF7 344 aa6.45□□□□□ -1.38
HDAC3-214ENST00000495485 UBE2AP49459 152 aa6.45□□□□□ -1.38
HDAC3-214ENST00000495485 PHF5AQ7RTV0 110 aaKnown RBP6.45□□□□□ -1.38
HDAC3-214ENST00000495485 HSPG2P98160 4391 aa6.45□□□□□ -1.38
HDAC3-214ENST00000495485 RYR1P21817 5038 aa6.44□□□□□ -1.38
HDAC3-214ENST00000495485 DEFB105AQ8NG35 78 aa6.43□□□□□ -1.38
HDAC3-214ENST00000495485 CDIP1Q9H305 208 aa6.43□□□□□ -1.38
HDAC3-214ENST00000495485 F8WEM9 126 aa6.42□□□□□ -1.38
HDAC3-214ENST00000495485 BCE1O60756 84 aa6.42□□□□□ -1.38
HDAC3-214ENST00000495485 Q6ZSA8 131 aa6.42□□□□□ -1.38
HDAC3-214ENST00000495485 Q9BRP9 147 aa6.42□□□□□ -1.38
HDAC3-214ENST00000495485 PLAC8Q9NZF1 115 aa6.42□□□□□ -1.38
HDAC3-214ENST00000495485 KIAA1109Q2LD37 5005 aa6.42□□□□□ -1.38
HDAC3-214ENST00000495485 IGLV5-48A0A075B6I7 105 aa6.41□□□□□ -1.38
HDAC3-214ENST00000495485 LINC00643Q86TS7 51 aa6.41□□□□□ -1.38
HDAC3-214ENST00000495485 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-214ENST00000495485 A0A1B0GW54 56 aa6.4□□□□□ -1.38
HDAC3-214ENST00000495485 SCGB1A1P11684 91 aa6.4□□□□□ -1.38
HDAC3-214ENST00000495485 Q6ZQT0 140 aa6.4□□□□□ -1.38
HDAC3-214ENST00000495485 Q8N377 158 aa6.4□□□□□ -1.38
HDAC3-214ENST00000495485 SMCR5Q8TEV8 140 aa6.4□□□□□ -1.38
HDAC3-214ENST00000495485 HIGD2AQ9BW72 106 aa6.4□□□□□ -1.38
HDAC3-214ENST00000495485 UBL5Q9BZL1 73 aa6.4□□□□□ -1.38
HDAC3-214ENST00000495485 VPS13BQ7Z7G8 4022 aa6.39□□□□□ -1.39
HDAC3-214ENST00000495485 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
HDAC3-214ENST00000495485 A0A1B0GV72 72 aa6.39□□□□□ -1.39
HDAC3-214ENST00000495485 KRTAP10-1P60331 282 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms