RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 DIRC1Q969H9 104 aa10.57□□□□□ -0.72
CBX4-204ENST00000495122 TRBV10-3A0A0K0K1G6 114 aa10.56□□□□□ -0.72
CBX4-204ENST00000495122 LOC107984640A0A0U1RRK4 108 aa10.56□□□□□ -0.72
CBX4-204ENST00000495122 CNBPP62633 177 aaKnown RBP10.56□□□□□ -0.72
CBX4-204ENST00000495122 LINC00575Q6W349 94 aa10.56□□□□□ -0.72
CBX4-204ENST00000495122 HSPG2P98160 4391 aa10.55□□□□□ -0.72
CBX4-204ENST00000495122 ACYP1P07311 99 aa10.55□□□□□ -0.72
CBX4-204ENST00000495122 GAGE2EQ4V326 116 aa10.55□□□□□ -0.72
CBX4-204ENST00000495122 GAGE2DQ9UEU5 116 aa10.55□□□□□ -0.72
CBX4-204ENST00000495122 PSCAO43653 123 aa10.54□□□□□ -0.72
CBX4-204ENST00000495122 TNP2Q05952 138 aa10.54□□□□□ -0.72
CBX4-204ENST00000495122 NKAPP1Q8N9T2 125 aa10.54□□□□□ -0.72
CBX4-204ENST00000495122 TMEM256-PLSCR3K7ERE1 68 aa10.53□□□□□ -0.72
CBX4-204ENST00000495122 ZNF73O43830 326 aaPredicted RBP10.53□□□□□ -0.72
CBX4-204ENST00000495122 C9orf129Q5T035 196 aaKnown RBP10.53□□□□□ -0.72
CBX4-204ENST00000495122 KRTAP1-5Q9BYS1 174 aa10.53□□□□□ -0.72
CBX4-204ENST00000495122 ABCA13Q86UQ4 5058 aa10.52□□□□□ -0.72
CBX4-204ENST00000495122 SLPIP03973 132 aa10.52□□□□□ -0.73
CBX4-204ENST00000495122 OBSCN-AS1Q96MR7 158 aa10.52□□□□□ -0.73
CBX4-204ENST00000495122 SIGMAR1Q99720 223 aa10.52□□□□□ -0.73
CBX4-204ENST00000495122 LRP1BQ9NZR2 4599 aa10.51□□□□□ -0.73
CBX4-204ENST00000495122 hADV29S1A0JD25 119 aa10.51□□□□□ -0.73
CBX4-204ENST00000495122 COX7BP24311 80 aa10.51□□□□□ -0.73
CBX4-204ENST00000495122 ELOF1P60002 83 aaKnown RBP10.51□□□□□ -0.73
CBX4-204ENST00000495122 C22orf24Q9Y442 160 aa10.51□□□□□ -0.73
CBX4-204ENST00000495122 JMJD7-PLA2G4BH0Y9G9 81 aa10.5□□□□□ -0.73
CBX4-204ENST00000495122 CDIP1Q9H305 208 aa10.5□□□□□ -0.73
CBX4-204ENST00000495122 KCNQ1DNQ9H478 68 aa10.49□□□□□ -0.73
CBX4-204ENST00000495122 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.48□□□□□ -0.73
CBX4-204ENST00000495122 APOBP04114 4563 aaKnown RBP10.48□□□□□ -0.73
CBX4-204ENST00000495122 DNAH5Q8TE73 4624 aa10.47□□□□□ -0.73
CBX4-204ENST00000495122 PRYO14603 147 aa10.47□□□□□ -0.73
CBX4-204ENST00000495122 SCGB1A1P11684 91 aa10.47□□□□□ -0.73
CBX4-204ENST00000495122 C21orf62-AS1Q17RA5 79 aa10.47□□□□□ -0.73
CBX4-204ENST00000495122 C16orf90A8MZG2 172 aa10.46□□□□□ -0.73
CBX4-204ENST00000495122 C7orf33Q8WU49 177 aa10.45□□□□□ -0.74
CBX4-204ENST00000495122 SERTAD4-AS1Q5TG53 156 aa10.44□□□□□ -0.74
CBX4-204ENST00000495122 GAGE2BQ13066 116 aa10.43□□□□□ -0.74
CBX4-204ENST00000495122 LINC00528Q8N1L1 170 aa10.43□□□□□ -0.74
CBX4-204ENST00000495122 CDK2AP2O75956 126 aa10.42□□□□□ -0.74
CBX4-204ENST00000495122 Q6ZRN7 208 aaPredicted RBP10.42□□□□□ -0.74
CBX4-204ENST00000495122 KRTAP4-5Q9BYR2 181 aa10.42□□□□□ -0.74
CBX4-204ENST00000495122 IGLV1-50A0A075B6I6 118 aa10.41□□□□□ -0.74
CBX4-204ENST00000495122 LRCOL1A6NCL2 159 aa10.41□□□□□ -0.74
CBX4-204ENST00000495122 SPRR1AP35321 89 aa10.4□□□□□ -0.74
CBX4-204ENST00000495122 MRPL55Q7Z7F7 128 aaKnown RBP10.4□□□□□ -0.74
CBX4-204ENST00000495122 DHRS4-AS1Q9P1J3 65 aa10.4□□□□□ -0.74
CBX4-204ENST00000495122 Q6ZQY7 126 aa10.39□□□□□ -0.75
CBX4-204ENST00000495122 LINC00474Q9P2X8 69 aa10.39□□□□□ -0.75
CBX4-204ENST00000495122 PDE6GP18545 87 aa10.38□□□□□ -0.75
CBX4-204ENST00000495122 KRTAP10-2P60368 255 aa10.38□□□□□ -0.75
CBX4-204ENST00000495122 C9orf163Q8N9P6 203 aa10.38□□□□□ -0.75
CBX4-204ENST00000495122 XGP55808 180 aa10.37□□□□□ -0.75
CBX4-204ENST00000495122 SDIM1Q6ZPB5 146 aa10.37□□□□□ -0.75
CBX4-204ENST00000495122 LOC110117498A0A087WWA1 95 aa10.35□□□□□ -0.75
CBX4-204ENST00000495122 KRTAP4-16G5E9R7 235 aaPredicted RBP10.35□□□□□ -0.75
CBX4-204ENST00000495122 GAGE2AQ6NT46 116 aa10.35□□□□□ -0.75
CBX4-204ENST00000495122 Q6Q795 121 aa10.35□□□□□ -0.75
CBX4-204ENST00000495122 C14orf132Q9NPU4 83 aa10.35□□□□□ -0.75
CBX4-204ENST00000495122 A0A096LNI7 61 aa10.34□□□□□ -0.75
CBX4-204ENST00000495122 ETDCA0A1B0GVM5 59 aa10.34□□□□□ -0.75
CBX4-204ENST00000495122 CCKP06307 115 aa10.34□□□□□ -0.75
CBX4-204ENST00000495122 Q6ZRX8 168 aa10.34□□□□□ -0.75
CBX4-204ENST00000495122 FAM19A5Q7Z5A7 132 aaPredicted RBP10.34□□□□□ -0.75
CBX4-204ENST00000495122 FAM168BA1KXE4 195 aa10.33□□□□□ -0.76
CBX4-204ENST00000495122 MT-ATP8P03928 68 aa10.33□□□□□ -0.76
CBX4-204ENST00000495122 PCP4P48539 62 aa10.33□□□□□ -0.76
CBX4-204ENST00000495122 RBM3P98179 157 aaKnown RBP10.33□□□□□ -0.76
CBX4-204ENST00000495122 LINC00643Q86TS7 51 aa10.33□□□□□ -0.76
CBX4-204ENST00000495122 KRTAP7-1Q8IUC3 87 aa10.33□□□□□ -0.76
CBX4-204ENST00000495122 B5MCH6 92 aa10.32□□□□□ -0.76
CBX4-204ENST00000495122 LAMTOR3Q9UHA4 124 aa10.32□□□□□ -0.76
CBX4-204ENST00000495122 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.3□□□□□ -0.76
CBX4-204ENST00000495122 REG3GQ6UW15 175 aa10.3□□□□□ -0.76
CBX4-204ENST00000495122 IMUPQ9GZP8 106 aa10.3□□□□□ -0.76
CBX4-204ENST00000495122 Q8N1X5 172 aa10.29□□□□□ -0.76
CBX4-204ENST00000495122 DSCR8Q96T75 97 aa10.29□□□□□ -0.76
CBX4-204ENST00000495122 A0A087WTM6 91 aa10.28□□□□□ -0.76
CBX4-204ENST00000495122 RPL37AP8A6NKH3 93 aa10.28□□□□□ -0.76
CBX4-204ENST00000495122 IGKV2-24A0A0C4DH68 120 aa10.27□□□□□ -0.77
CBX4-204ENST00000495122 TRBV7-7A0A0K0K1E9 115 aa10.27□□□□□ -0.77
CBX4-204ENST00000495122 Q6ZQT0 140 aa10.27□□□□□ -0.77
CBX4-204ENST00000495122 FUSP35637 526 aaKnown RBP eCLIP10.26□□□□□ -0.771e-6■■■■□ 21.4
CBX4-204ENST00000495122 NDUFV3P56181 108 aaKnown RBP10.26□□□□□ -0.77
CBX4-204ENST00000495122 A0A1W2PNN7 141 aa10.25□□□□□ -0.77
CBX4-204ENST00000495122 EPM2AB3EWF7 344 aa10.25□□□□□ -0.77
CBX4-204ENST00000495122 IGLV5-48A0A075B6I7 105 aa10.24□□□□□ -0.77
CBX4-204ENST00000495122 TRBV7-4A0A0J9YYF1 115 aa10.24□□□□□ -0.77
CBX4-204ENST00000495122 H0Y9J4 135 aa10.24□□□□□ -0.77
CBX4-204ENST00000495122 VPS13BQ7Z7G8 4022 aa10.24□□□□□ -0.77
CBX4-204ENST00000495122 ATP5EP2Q5VTU8 51 aa10.23□□□□□ -0.77
CBX4-204ENST00000495122 Q6JHZ5 121 aa10.22□□□□□ -0.77
CBX4-204ENST00000495122 SMCR5Q8TEV8 140 aa10.22□□□□□ -0.77
CBX4-204ENST00000495122 Q9BRP9 147 aa10.22□□□□□ -0.77
CBX4-204ENST00000495122 A0A1B0GW54 56 aa10.21□□□□□ -0.77
CBX4-204ENST00000495122 UBE2BP63146 152 aa10.2□□□□□ -0.78
CBX4-204ENST00000495122 LINC00846Q9NV44 126 aa10.2□□□□□ -0.78
CBX4-204ENST00000495122 LINC01547P58512 204 aaPredicted RBP10.19□□□□□ -0.78
CBX4-204ENST00000495122 KRTAP10-1P60331 282 aa10.19□□□□□ -0.78
CBX4-204ENST00000495122 SPACA4Q8TDM5 124 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms