RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 KRTDAPP60985 99 aa9.01□□□□□ -0.97
COL4A2-209ENST00000494852 SOSTDC1Q6X4U4 206 aa9.01□□□□□ -0.97
COL4A2-209ENST00000494852 C3orf22Q8N5N4 141 aa9.01□□□□□ -0.97
COL4A2-209ENST00000494852 SPANXB1Q9NS25 103 aaPredicted RBP9.01□□□□□ -0.97
COL4A2-209ENST00000494852 DDTP30046 118 aa9□□□□□ -0.97
COL4A2-209ENST00000494852 KRTAP13-3Q3SY46 172 aa9□□□□□ -0.97
COL4A2-209ENST00000494852 EIF4EBP3O60516 100 aaPredicted RBP8.99□□□□□ -0.97
COL4A2-209ENST00000494852 S100A1P23297 94 aa8.99□□□□□ -0.97
COL4A2-209ENST00000494852 S100A12P80511 92 aa8.99□□□□□ -0.97
COL4A2-209ENST00000494852 LITAFQ99732 161 aa8.99□□□□□ -0.97
COL4A2-209ENST00000494852 ETDCA0A1B0GVM5 59 aa8.98□□□□□ -0.97
COL4A2-209ENST00000494852 NPC2P61916 151 aa8.98□□□□□ -0.97
COL4A2-209ENST00000494852 KRTAP4-1Q9BYQ7 146 aa8.98□□□□□ -0.97
COL4A2-209ENST00000494852 C20orf202A1L168 122 aa8.97□□□□□ -0.97
COL4A2-209ENST00000494852 ZNF815PA8K554 130 aa8.97□□□□□ -0.97
COL4A2-209ENST00000494852 TIMM17BO60830 172 aa8.97□□□□□ -0.97
COL4A2-209ENST00000494852 IGLV6-57P01721 117 aa8.97□□□□□ -0.97
COL4A2-209ENST00000494852 SPRR4Q96PI1 79 aa8.97□□□□□ -0.97
COL4A2-209ENST00000494852 SEC61BP60468 96 aaKnown RBP8.96□□□□□ -0.98
COL4A2-209ENST00000494852 S100A7L2Q5SY68 101 aa8.96□□□□□ -0.98
COL4A2-209ENST00000494852 TTTY13Q9BZ97 58 aa8.96□□□□□ -0.98
COL4A2-209ENST00000494852 B5MCH6 92 aa8.95□□□□□ -0.98
COL4A2-209ENST00000494852 C4orf48Q5BLP8 95 aa8.95□□□□□ -0.98
COL4A2-209ENST00000494852 LINC00308Q8TCZ7 52 aa8.95□□□□□ -0.98
COL4A2-209ENST00000494852 SMCR5Q8TEV8 140 aa8.95□□□□□ -0.98
COL4A2-209ENST00000494852 ZNF706Q9Y5V0 76 aaPredicted RBP8.95□□□□□ -0.98
COL4A2-209ENST00000494852 ANKRD39Q53RE8 183 aa8.93□□□□□ -0.98
COL4A2-209ENST00000494852 SPANXCQ9NY87 97 aa8.93□□□□□ -0.98
COL4A2-209ENST00000494852 TRAV23DV6A0A075B6W5 121 aa8.92□□□□□ -0.98
COL4A2-209ENST00000494852 AKR1D1P51857 326 aa8.92□□□□□ -0.98
COL4A2-209ENST00000494852 Q6ZRX8 168 aa8.91□□□□□ -0.98
COL4A2-209ENST00000494852 ATOH7Q8N100 152 aa8.91□□□□□ -0.98
COL4A2-209ENST00000494852 HIST3H2BBQ8N257 126 aa8.91□□□□□ -0.98
COL4A2-209ENST00000494852 Q9BRP9 147 aa8.9□□□□□ -0.98
COL4A2-209ENST00000494852 ZNF73O43830 326 aaPredicted RBP8.89□□□□□ -0.99
COL4A2-209ENST00000494852 ERC2-IT1O76042 136 aa8.89□□□□□ -0.99
COL4A2-209ENST00000494852 SPINK1P00995 79 aa8.89□□□□□ -0.99
COL4A2-209ENST00000494852 LINC00483Q53H64 154 aa8.89□□□□□ -0.99
COL4A2-209ENST00000494852 Q8NBF4 154 aa8.89□□□□□ -0.99
COL4A2-209ENST00000494852 HIST1H2BLQ99880 126 aa8.89□□□□□ -0.99
COL4A2-209ENST00000494852 S100A2P29034 98 aa8.88□□□□□ -0.99
COL4A2-209ENST00000494852 SCGB1D4Q6XE38 83 aa8.88□□□□□ -0.99
COL4A2-209ENST00000494852 SPANXDQ9BXN6 97 aa8.88□□□□□ -0.99
COL4A2-209ENST00000494852 CBY1Q9Y3M2 126 aa8.88□□□□□ -0.99
COL4A2-209ENST00000494852 SNRPEP62304 92 aaKnown RBP8.87□□□□□ -0.99
COL4A2-209ENST00000494852 JOSD1Q15040 202 aaPredicted RBP8.87□□□□□ -0.99
COL4A2-209ENST00000494852 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
COL4A2-209ENST00000494852 GAGE2AQ6NT46 116 aa8.86□□□□□ -0.99
COL4A2-209ENST00000494852 PCP2Q8IVA1 136 aa8.86□□□□□ -0.99
COL4A2-209ENST00000494852 LINC00518Q8N0U6 118 aa8.86□□□□□ -0.99
COL4A2-209ENST00000494852 OR13C6PQ8NH95 151 aa8.86□□□□□ -0.99
COL4A2-209ENST00000494852 S100A6P06703 90 aa8.85□□□□□ -0.99
COL4A2-209ENST00000494852 HINT1P49773 126 aaPredicted RBP8.84□□□□□ -0.99
COL4A2-209ENST00000494852 IFITM1P13164 125 aa8.83□□□□□ -1
COL4A2-209ENST00000494852 XP32Q5T750 250 aa8.83□□□□□ -1
COL4A2-209ENST00000494852 Q6ZVH6 145 aa8.83□□□□□ -1
COL4A2-209ENST00000494852 COPS9Q8WXC6 57 aa8.83□□□□□ -1
COL4A2-209ENST00000494852 RPS29P62273 56 aaKnown RBP8.82□□□□□ -1
COL4A2-209ENST00000494852 C5orf52A6NGY3 159 aa8.8□□□□□ -1
COL4A2-209ENST00000494852 MUSTN1Q8IVN3 82 aa8.8□□□□□ -1
COL4A2-209ENST00000494852 Q8N377 158 aa8.8□□□□□ -1
COL4A2-209ENST00000494852 ST20-AS1Q8NBB2 130 aa8.79□□□□□ -1
COL4A2-209ENST00000494852 IGLV9-49A0A0B4J1Y8 123 aa8.78□□□□□ -1
COL4A2-209ENST00000494852 HSBP1L1C9JCN9 74 aa8.78□□□□□ -1
COL4A2-209ENST00000494852 CFC1BP0CG36 223 aa8.78□□□□□ -1
COL4A2-209ENST00000494852 KRTAP19-2Q3LHN2 52 aa8.78□□□□□ -1
COL4A2-209ENST00000494852 C6orf99Q4VX62 202 aa8.78□□□□□ -1
COL4A2-209ENST00000494852 SSBP3-AS1Q7Z2R9 100 aa8.78□□□□□ -1
COL4A2-209ENST00000494852 DHRS4-AS1Q9P1J3 65 aa8.78□□□□□ -1
COL4A2-209ENST00000494852 SLC25A20O43772 301 aa8.77□□□□□ -1.01
COL4A2-209ENST00000494852 ELOF1P60002 83 aaKnown RBP8.77□□□□□ -1.01
COL4A2-209ENST00000494852 MT1HP80294 61 aa8.77□□□□□ -1.01
COL4A2-209ENST00000494852 MOBPQ13875 183 aa8.77□□□□□ -1.01
COL4A2-209ENST00000494852 COX7BP24311 80 aa8.76□□□□□ -1.01
COL4A2-209ENST00000494852 TRBV7-6A0A0J9YX20 115 aa8.75□□□□□ -1.01
COL4A2-209ENST00000494852 A6NDN8 102 aa8.75□□□□□ -1.01
COL4A2-209ENST00000494852 SCGB1D1O95968 90 aa8.74□□□□□ -1.01
COL4A2-209ENST00000494852 SPRR1BP22528 89 aa8.73□□□□□ -1.01
COL4A2-209ENST00000494852 TRAV13-2A0A0B4J235 113 aa8.72□□□□□ -1.01
COL4A2-209ENST00000494852 A0A1B0GWB2 263 aa8.71□□□□□ -1.02
COL4A2-209ENST00000494852 C9orf153Q5TBE3 101 aa8.71□□□□□ -1.02
COL4A2-209ENST00000494852 LORP23490 312 aaPredicted RBP8.7□□□□□ -1.02
COL4A2-209ENST00000494852 SLC25A34Q6PIV7 304 aa8.7□□□□□ -1.02
COL4A2-209ENST00000494852 SMIM11BQ8TCY0 68 aa8.68□□□□□ -1.02
COL4A2-209ENST00000494852 A4D1N5 150 aa8.67□□□□□ -1.02
COL4A2-209ENST00000494852 COX8AP10176 69 aa8.67□□□□□ -1.02
COL4A2-209ENST00000494852 KRTAP10-6P60371 365 aaPredicted RBP8.67□□□□□ -1.02
COL4A2-209ENST00000494852 TAL2Q16559 108 aa8.67□□□□□ -1.02
COL4A2-209ENST00000494852 LAMTOR3Q9UHA4 124 aa8.67□□□□□ -1.02
COL4A2-209ENST00000494852 IGLV8-61A0A075B6I0 122 aa8.65□□□□□ -1.02
COL4A2-209ENST00000494852 TEX49A0A1B0GTD5 131 aa8.65□□□□□ -1.02
COL4A2-209ENST00000494852 PCOTHQ58A44 107 aa8.65□□□□□ -1.02
COL4A2-209ENST00000494852 DEFB105AQ8NG35 78 aa8.65□□□□□ -1.02
COL4A2-209ENST00000494852 DLEU1O43261 78 aa8.64□□□□□ -1.03
COL4A2-209ENST00000494852 IGLV5-48A0A075B6I7 105 aa8.63□□□□□ -1.03
COL4A2-209ENST00000494852 HIST1H4GQ99525 98 aa8.63□□□□□ -1.03
COL4A2-209ENST00000494852 NHP2Q9NX24 153 aaKnown RBP8.63□□□□□ -1.03
COL4A2-209ENST00000494852 Q1RN00 199 aa8.62□□□□□ -1.03
COL4A2-209ENST00000494852 SMIM29Q86T20 159 aa8.62□□□□□ -1.03
COL4A2-209ENST00000494852 VAMP3Q15836 100 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms