RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 TM2D3Q9BRN9 247 aa11.12□□□□□ -0.63
SYP-208ENST00000494396 MGAM2Q2M2H8 2515 aa11.12□□□□□ -0.63
SYP-208ENST00000494396 ELOF1P60002 83 aaKnown RBP11.12□□□□□ -0.63
SYP-208ENST00000494396 DNAH3Q8TD57 4116 aa11.11□□□□□ -0.63
SYP-208ENST00000494396 ZNF73O43830 326 aaPredicted RBP11.1□□□□□ -0.63
SYP-208ENST00000494396 HTN3P15516 51 aa11.1□□□□□ -0.63
SYP-208ENST00000494396 UNQ6190/PRO20217Q6UXQ8 127 aa11.1□□□□□ -0.63
SYP-208ENST00000494396 PRB2P02812 416 aaPredicted RBP11.08□□□□□ -0.63
SYP-208ENST00000494396 IGLV10-54A0A075B6I4 117 aa11.08□□□□□ -0.64
SYP-208ENST00000494396 C10orf25Q5T742 122 aa11.07□□□□□ -0.64
SYP-208ENST00000494396 KPRPQ5T749 579 aaPredicted RBP11.07□□□□□ -0.64
SYP-208ENST00000494396 A0A1B0GW54 56 aa11.07□□□□□ -0.64
SYP-208ENST00000494396 K7EIL1 84 aa11.06□□□□□ -0.64
SYP-208ENST00000494396 PRR34Q9NV39 138 aa11.06□□□□□ -0.64
SYP-208ENST00000494396 TENM3Q9P273 2699 aa11.05□□□□□ -0.64
SYP-208ENST00000494396 A0A0U1RQV1 116 aa11.04□□□□□ -0.64
SYP-208ENST00000494396 PRYO14603 147 aa11.04□□□□□ -0.64
SYP-208ENST00000494396 LELP1Q5T871 98 aa11.04□□□□□ -0.64
SYP-208ENST00000494396 OCR1Q9BZK8 76 aa11.04□□□□□ -0.64
SYP-208ENST00000494396 C1orf43Q9BWL3 253 aa11.03□□□□□ -0.64
SYP-208ENST00000494396 M0R378 163 aa11.02□□□□□ -0.65
SYP-208ENST00000494396 IGKV4-1P06312 121 aa11.02□□□□□ -0.65
SYP-208ENST00000494396 Q6ZTC4 211 aa11.02□□□□□ -0.65
SYP-208ENST00000494396 SCXQ7RTU7 201 aa11□□□□□ -0.65
SYP-208ENST00000494396 C11orf45Q8TAV5 145 aa11□□□□□ -0.65
SYP-208ENST00000494396 H3BNG1 76 aa11□□□□□ -0.65
SYP-208ENST00000494396 LINC00528Q8N1L1 170 aa11□□□□□ -0.65
SYP-208ENST00000494396 C6orf48Q9UBA6 75 aa11□□□□□ -0.65
SYP-208ENST00000494396 FUSP35637 526 aaKnown RBP eCLIP10.99□□□□□ -0.65
SYP-208ENST00000494396 ESRGQ1W209 222 aa10.99□□□□□ -0.65
SYP-208ENST00000494396 HIGD2BQ4VC39 106 aa10.99□□□□□ -0.65
SYP-208ENST00000494396 LINC00474Q9P2X8 69 aa10.99□□□□□ -0.65
SYP-208ENST00000494396 VPREB1P12018 145 aa10.98□□□□□ -0.65
SYP-208ENST00000494396 DEFB131BA0A096LNP1 70 aa10.95□□□□□ -0.66
SYP-208ENST00000494396 F8WDY8 70 aa10.94□□□□□ -0.66
SYP-208ENST00000494396 XAGE1AQ9HD64 81 aa10.94□□□□□ -0.66
SYP-208ENST00000494396 BRK1Q8WUW1 75 aa10.94□□□□□ -0.66
SYP-208ENST00000494396 LCE6AA0A183 80 aa10.93□□□□□ -0.66
SYP-208ENST00000494396 KLK12Q9UKR0 248 aa10.93□□□□□ -0.66
SYP-208ENST00000494396 IGLV5-48A0A075B6I7 105 aa10.91□□□□□ -0.66
SYP-208ENST00000494396 CAMK2N2Q96S95 79 aa10.9□□□□□ -0.66
SYP-208ENST00000494396 PKIGQ9Y2B9 76 aa10.88□□□□□ -0.67
SYP-208ENST00000494396 C1orf195Q5TG92 126 aa10.88□□□□□ -0.67
SYP-208ENST00000494396 Q8N9L7 120 aa10.87□□□□□ -0.67
SYP-208ENST00000494396 FAM229BQ4G0N7 80 aa10.86□□□□□ -0.67
SYP-208ENST00000494396 KCNQ1DNQ9H478 68 aa10.86□□□□□ -0.67
SYP-208ENST00000494396 WFDC10BQ8IUB3 73 aa10.85□□□□□ -0.67
SYP-208ENST00000494396 HIGD2AQ9BW72 106 aa10.85□□□□□ -0.67
SYP-208ENST00000494396 MPLKIPQ8TAP9 179 aa10.85□□□□□ -0.67
SYP-208ENST00000494396 hDV103S1A0JD37 113 aa10.84□□□□□ -0.67
SYP-208ENST00000494396 Q1T7F1 81 aa10.84□□□□□ -0.67
SYP-208ENST00000494396 B9D2Q9BPU9 175 aa10.84□□□□□ -0.67
SYP-208ENST00000494396 DHRS4-AS1Q9P1J3 65 aa10.84□□□□□ -0.67
SYP-208ENST00000494396 V9GYY9 64 aa10.83□□□□□ -0.68
SYP-208ENST00000494396 STAB2Q8WWQ8 2551 aa10.82□□□□□ -0.68
SYP-208ENST00000494396 HUWE1Q7Z6Z7 4374 aaKnown RBP10.81□□□□□ -0.68
SYP-208ENST00000494396 C3orf84H3BNL1 204 aa10.81□□□□□ -0.68
SYP-208ENST00000494396 Q6ZRU5 148 aa10.8□□□□□ -0.68
SYP-208ENST00000494396 Q8N377 158 aa10.8□□□□□ -0.68
SYP-208ENST00000494396 SMIM29Q86T20 159 aa10.8□□□□□ -0.68
SYP-208ENST00000494396 PRR15Q8IV56 129 aa10.8□□□□□ -0.68
SYP-208ENST00000494396 ZCCHC13Q8WW36 166 aaKnown RBP10.8□□□□□ -0.68
SYP-208ENST00000494396 KRTAP26-1Q6PEX3 210 aa10.79□□□□□ -0.68
SYP-208ENST00000494396 COL7A1Q02388 2944 aa10.79□□□□□ -0.68
SYP-208ENST00000494396 ETDCA0A1B0GVM5 59 aa10.78□□□□□ -0.68
SYP-208ENST00000494396 NKAPP1Q8N9T2 125 aa10.78□□□□□ -0.68
SYP-208ENST00000494396 SPRR4Q96PI1 79 aa10.78□□□□□ -0.68
SYP-208ENST00000494396 CYP4F30PQ9H0H9 118 aa10.78□□□□□ -0.68
SYP-208ENST00000494396 PLA2G2DQ9UNK4 145 aa10.77□□□□□ -0.69
SYP-208ENST00000494396 NDUFB1O75438 58 aa10.77□□□□□ -0.69
SYP-208ENST00000494396 LINC01556Q5JQF7 62 aa10.77□□□□□ -0.69
SYP-208ENST00000494396 C15orf56Q8N910 161 aa10.77□□□□□ -0.69
SYP-208ENST00000494396 Q8NBF4 154 aa10.77□□□□□ -0.69
SYP-208ENST00000494396 TNP2Q05952 138 aa10.76□□□□□ -0.69
SYP-208ENST00000494396 FAM30AQ9NZY2 134 aa10.75□□□□□ -0.69
SYP-208ENST00000494396 Q6ZRP5 223 aa10.74□□□□□ -0.69
SYP-208ENST00000494396 Q6ZRX8 168 aa10.74□□□□□ -0.69
SYP-208ENST00000494396 A0A1W2PNM2 257 aa10.73□□□□□ -0.69
SYP-208ENST00000494396 C1orf137Q5JT78 98 aa10.73□□□□□ -0.69
SYP-208ENST00000494396 DNAH10OSP0CZ25 163 aa10.73□□□□□ -0.69
SYP-208ENST00000494396 C1orf64Q8NEQ6 169 aa10.73□□□□□ -0.69
SYP-208ENST00000494396 LINC00588Q9Y4M8 146 aa10.73□□□□□ -0.69
SYP-208ENST00000494396 TLX1NBP0CAT3 122 aa10.72□□□□□ -0.69
SYP-208ENST00000494396 SYCNQ0VAF6 134 aa10.72□□□□□ -0.69
SYP-208ENST00000494396 DEFB105AQ8NG35 78 aa10.71□□□□□ -0.69
SYP-208ENST00000494396 DNAH9Q9NYC9 4486 aa10.71□□□□□ -0.7
SYP-208ENST00000494396 IGLV5-37A0A075B6J1 123 aa10.7□□□□□ -0.7
SYP-208ENST00000494396 C7orf33Q8WU49 177 aa10.7□□□□□ -0.7
SYP-208ENST00000494396 SPRR1AP35321 89 aa10.69□□□□□ -0.7
SYP-208ENST00000494396 KRTAP21-3Q3LHN1 58 aa10.69□□□□□ -0.7
SYP-208ENST00000494396 KRTAP4-16G5E9R7 235 aaPredicted RBP10.69□□□□□ -0.7
SYP-208ENST00000494396 DSCR10P59022 87 aa10.69□□□□□ -0.7
SYP-208ENST00000494396 MEGF8Q7Z7M0 2845 aa10.69□□□□□ -0.7
SYP-208ENST00000494396 DNHD1Q96M86 4753 aa10.67□□□□□ -0.7
SYP-208ENST00000494396 HCG22E2RYF7 251 aa10.67□□□□□ -0.7
SYP-208ENST00000494396 SEC61GP60059 68 aa10.67□□□□□ -0.7
SYP-208ENST00000494396 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.66□□□□□ -0.7
SYP-208ENST00000494396 LCE2DQ5TA82 110 aaPredicted RBP10.66□□□□□ -0.7
SYP-208ENST00000494396 IGKV2D-24A0A075B6R9 120 aa10.65□□□□□ -0.7
SYP-208ENST00000494396 IGLV1-50A0A075B6I6 118 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms