RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 LRP2P98164 4655 aa4.73□□□□□ -1.65
RIF1-211ENST00000494333 MYMXA0A1B0GTQ4 84 aa4.72□□□□□ -1.65
RIF1-211ENST00000494333 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
RIF1-211ENST00000494333 COLCA2A8K830 154 aa4.72□□□□□ -1.65
RIF1-211ENST00000494333 LINC00587B1AMM8 73 aa4.72□□□□□ -1.65
RIF1-211ENST00000494333 KRTAP13-2Q52LG2 175 aa4.72□□□□□ -1.65
RIF1-211ENST00000494333 PLEKHB2Q96CS7 222 aa4.72□□□□□ -1.65
RIF1-211ENST00000494333 IGLV7-46A0A075B6I9 117 aa4.71□□□□□ -1.66
RIF1-211ENST00000494333 IGKV2D-26A0A0A0MRZ7 120 aa4.71□□□□□ -1.66
RIF1-211ENST00000494333 FAM229BQ4G0N7 80 aa4.71□□□□□ -1.66
RIF1-211ENST00000494333 LCE1FQ5T754 118 aa4.71□□□□□ -1.66
RIF1-211ENST00000494333 PMCHL2Q9BQD1 86 aa4.71□□□□□ -1.66
RIF1-211ENST00000494333 HIGD2AQ9BW72 106 aa4.71□□□□□ -1.66
RIF1-211ENST00000494333 MAP1LC3CQ9BXW4 147 aa4.71□□□□□ -1.66
RIF1-211ENST00000494333 HSPB8Q9UJY1 196 aa4.71□□□□□ -1.66
RIF1-211ENST00000494333 KRTAP16-1A8MUX0 517 aa4.7□□□□□ -1.66
RIF1-211ENST00000494333 NCR3O14931 201 aa4.7□□□□□ -1.66
RIF1-211ENST00000494333 LEPROTO15243 131 aa4.7□□□□□ -1.66
RIF1-211ENST00000494333 PLNP26678 52 aa4.7□□□□□ -1.66
RIF1-211ENST00000494333 TSPEAR-AS2P59090 65 aa4.7□□□□□ -1.66
RIF1-211ENST00000494333 J3QQQ9 107 aa4.69□□□□□ -1.66
RIF1-211ENST00000494333 DPM2O94777 84 aa4.69□□□□□ -1.66
RIF1-211ENST00000494333 IGKCP01834 107 aa4.69□□□□□ -1.66
RIF1-211ENST00000494333 HERVK_113P61574 105 aa4.69□□□□□ -1.66
RIF1-211ENST00000494333 DAND5Q8N907 189 aa4.69□□□□□ -1.66
RIF1-211ENST00000494333 LINC00304Q8N9R0 145 aa4.69□□□□□ -1.66
RIF1-211ENST00000494333 TRBV10-3A0A0K0K1G6 114 aa4.68□□□□□ -1.66
RIF1-211ENST00000494333 KCNQ1DNQ9H478 68 aa4.68□□□□□ -1.66
RIF1-211ENST00000494333 RNF213Q63HN8 5207 aa4.68□□□□□ -1.66
RIF1-211ENST00000494333 ETDCA0A1B0GVM5 59 aa4.67□□□□□ -1.66
RIF1-211ENST00000494333 LGALS3P17931 250 aaKnown RBP4.67□□□□□ -1.66
RIF1-211ENST00000494333 SPRR1AP35321 89 aa4.67□□□□□ -1.66
RIF1-211ENST00000494333 S100A12P80511 92 aa4.67□□□□□ -1.66
RIF1-211ENST00000494333 C3orf22Q8N5N4 141 aa4.67□□□□□ -1.66
RIF1-211ENST00000494333 LINC00337Q8N6G1 96 aa4.67□□□□□ -1.66
RIF1-211ENST00000494333 SMCR5Q8TEV8 140 aa4.67□□□□□ -1.66
RIF1-211ENST00000494333 SPRR4Q96PI1 79 aa4.67□□□□□ -1.66
RIF1-211ENST00000494333 RETNLBQ9BQ08 111 aa4.67□□□□□ -1.66
RIF1-211ENST00000494333 LPAP08519 4548 aa4.66□□□□□ -1.66
RIF1-211ENST00000494333 LOC107984156A0A0G2JMH3 177 aa4.66□□□□□ -1.66
RIF1-211ENST00000494333 NMUP48645 174 aa4.66□□□□□ -1.66
RIF1-211ENST00000494333 ARL17AQ8IVW1 177 aa4.66□□□□□ -1.66
RIF1-211ENST00000494333 MIEN1Q9BRT3 115 aa4.66□□□□□ -1.66
RIF1-211ENST00000494333 TRBV10-2A0A0K0K1G8 114 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 KRTAP4-16G5E9R7 235 aaPredicted RBP4.65□□□□□ -1.67
RIF1-211ENST00000494333 HIST1H2BKO60814 126 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 HIST1H2BJP06899 126 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 HIST1H2BOP23527 126 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 DDTP30046 118 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 HIST1H2BBP33778 126 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 HIST1H2BDP58876 126 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 HIST1H2BCP62807 126 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 HIST2H2BEQ16778 126 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.65□□□□□ -1.67
RIF1-211ENST00000494333 HIST1H2BHQ93079 126 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 FAM218AQ96MZ4 157 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 HIST1H2BNQ99877 126 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 HIST1H2BMQ99879 126 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 PPDPFQ9H3Y8 114 aa4.65□□□□□ -1.67
RIF1-211ENST00000494333 ZNF706Q9Y5V0 76 aaPredicted RBP4.65□□□□□ -1.67
RIF1-211ENST00000494333 A0A0J9YXY3 114 aa4.64□□□□□ -1.67
RIF1-211ENST00000494333 E9PLD3 99 aa4.64□□□□□ -1.67
RIF1-211ENST00000494333 SYS1-DBNDD2H3BUS1 97 aa4.64□□□□□ -1.67
RIF1-211ENST00000494333 NPC2P61916 151 aa4.64□□□□□ -1.67
RIF1-211ENST00000494333 S100A7L2Q5SY68 101 aa4.64□□□□□ -1.67
RIF1-211ENST00000494333 NDUFC2O95298 119 aa4.63□□□□□ -1.67
RIF1-211ENST00000494333 CTAG1AP78358 180 aa4.63□□□□□ -1.67
RIF1-211ENST00000494333 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
RIF1-211ENST00000494333 SPAG11AQ6PDA7 123 aa4.63□□□□□ -1.67
RIF1-211ENST00000494333 SPANXB1Q9NS25 103 aaPredicted RBP4.63□□□□□ -1.67
RIF1-211ENST00000494333 ERC2-IT1O76042 136 aa4.62□□□□□ -1.67
RIF1-211ENST00000494333 IGLV6-57P01721 117 aa4.62□□□□□ -1.67
RIF1-211ENST00000494333 SOSTDC1Q6X4U4 206 aa4.62□□□□□ -1.67
RIF1-211ENST00000494333 LINC01545Q5VT33 79 aa4.61□□□□□ -1.67
RIF1-211ENST00000494333 PET117Q6UWS5 81 aa4.61□□□□□ -1.67
RIF1-211ENST00000494333 Q6ZRX8 168 aa4.61□□□□□ -1.67
RIF1-211ENST00000494333 Q8NBF4 154 aa4.61□□□□□ -1.67
RIF1-211ENST00000494333 Q9BRP9 147 aa4.61□□□□□ -1.67
RIF1-211ENST00000494333 TRAV23DV6A0A075B6W5 121 aa4.6□□□□□ -1.67
RIF1-211ENST00000494333 ZNF73O43830 326 aaPredicted RBP4.6□□□□□ -1.67
RIF1-211ENST00000494333 LINC00483Q53H64 154 aa4.6□□□□□ -1.67
RIF1-211ENST00000494333 ZNF815PA8K554 130 aa4.59□□□□□ -1.67
RIF1-211ENST00000494333 SPINK1P00995 79 aa4.59□□□□□ -1.67
RIF1-211ENST00000494333 C3orf79P0CE67 100 aa4.59□□□□□ -1.67
RIF1-211ENST00000494333 HINT1P49773 126 aaPredicted RBP4.59□□□□□ -1.67
RIF1-211ENST00000494333 KRTAP10-12P60413 245 aa4.59□□□□□ -1.67
RIF1-211ENST00000494333 JOSD1Q15040 202 aaPredicted RBP4.59□□□□□ -1.67
RIF1-211ENST00000494333 TPRXLQ17RH7 258 aa4.59□□□□□ -1.67
RIF1-211ENST00000494333 OR13C6PQ8NH95 151 aa4.59□□□□□ -1.67
RIF1-211ENST00000494333 LINC00308Q8TCZ7 52 aa4.59□□□□□ -1.67
RIF1-211ENST00000494333 TTTY13Q9BZ97 58 aa4.59□□□□□ -1.67
RIF1-211ENST00000494333 TIMM17BO60830 172 aa4.58□□□□□ -1.68
RIF1-211ENST00000494333 KRTDAPP60985 99 aa4.58□□□□□ -1.68
RIF1-211ENST00000494333 MOBPQ13875 183 aa4.58□□□□□ -1.68
RIF1-211ENST00000494333 SSBP3-AS1Q7Z2R9 100 aa4.58□□□□□ -1.68
RIF1-211ENST00000494333 SPANXCQ9NY87 97 aa4.58□□□□□ -1.68
RIF1-211ENST00000494333 COA6Q5JTJ3 125 aaKnown RBP4.57□□□□□ -1.68
RIF1-211ENST00000494333 CBY1Q9Y3M2 126 aa4.57□□□□□ -1.68
RIF1-211ENST00000494333 C5orf52A6NGY3 159 aa4.56□□□□□ -1.68
RIF1-211ENST00000494333 KRTAP5-11Q6L8G4 156 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms