RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ABCA12Q86UK0 2595 aa4.59□□□□□ -1.67
VPS13B-205ENST00000493587 ITPR3Q14573 2671 aa4.59□□□□□ -1.67
VPS13B-205ENST00000493587 A6NDX4 124 aa4.59□□□□□ -1.68
VPS13B-205ENST00000493587 B4DSR2 109 aa4.59□□□□□ -1.68
VPS13B-205ENST00000493587 SPINK7P58062 85 aa4.59□□□□□ -1.68
VPS13B-205ENST00000493587 USMG5Q96IX5 58 aa4.59□□□□□ -1.68
VPS13B-205ENST00000493587 ITPR2Q14571 2701 aa4.59□□□□□ -1.68
VPS13B-205ENST00000493587 GCN1Q92616 2671 aaKnown RBP4.58□□□□□ -1.68
VPS13B-205ENST00000493587 OTOGQ6ZRI0 2925 aa4.58□□□□□ -1.68
VPS13B-205ENST00000493587 DYNC2H1Q8NCM8 4307 aaKnown RBP4.58□□□□□ -1.68
VPS13B-205ENST00000493587 REG3AQ06141 175 aa4.58□□□□□ -1.68
VPS13B-205ENST00000493587 IGHV4-31P0DP07 118 aa4.58□□□□□ -1.68
VPS13B-205ENST00000493587 FAM208BQ5VWN6 2430 aa4.57□□□□□ -1.68
VPS13B-205ENST00000493587 IGLV10-54A0A075B6I4 117 aa4.57□□□□□ -1.68
VPS13B-205ENST00000493587 Q8NAQ8 132 aa4.57□□□□□ -1.68
VPS13B-205ENST00000493587 HELZ2Q9BYK8 2649 aaKnown RBP4.57□□□□□ -1.68
VPS13B-205ENST00000493587 LOC100131303A0A0U1RQF7 123 aa4.57□□□□□ -1.68
VPS13B-205ENST00000493587 LINC00959A0A1B0GUT2 108 aa4.56□□□□□ -1.68
VPS13B-205ENST00000493587 H0Y9P7 68 aa4.56□□□□□ -1.68
VPS13B-205ENST00000493587 PLA2G2AP14555 144 aa4.56□□□□□ -1.68
VPS13B-205ENST00000493587 Q8IZM0 81 aa4.56□□□□□ -1.68
VPS13B-205ENST00000493587 MAPK1IP1LQ8NDC0 245 aa4.56□□□□□ -1.68
VPS13B-205ENST00000493587 LINC00476Q8WZB0 136 aa4.56□□□□□ -1.68
VPS13B-205ENST00000493587 CSPG4Q6UVK1 2322 aa4.56□□□□□ -1.68
VPS13B-205ENST00000493587 KRTAP1-1Q07627 177 aa4.56□□□□□ -1.68
VPS13B-205ENST00000493587 K7EQZ3 153 aa4.56□□□□□ -1.68
VPS13B-205ENST00000493587 DSCR9P59020 149 aa4.56□□□□□ -1.68
VPS13B-205ENST00000493587 Q9BRP9 147 aa4.56□□□□□ -1.68
VPS13B-205ENST00000493587 XAGE1AQ9HD64 81 aa4.56□□□□□ -1.68
VPS13B-205ENST00000493587 NF1P21359 2839 aa4.55□□□□□ -1.68
VPS13B-205ENST00000493587 SONP18583 2426 aaKnown RBP4.55□□□□□ -1.68
VPS13B-205ENST00000493587 DEFB113Q30KQ7 82 aa4.55□□□□□ -1.68
VPS13B-205ENST00000493587 UNC79Q9P2D8 2635 aa4.55□□□□□ -1.68
VPS13B-205ENST00000493587 H3BUA1 57 aa4.55□□□□□ -1.68
VPS13B-205ENST00000493587 DEFB114Q30KQ6 69 aa4.55□□□□□ -1.68
VPS13B-205ENST00000493587 PCOTHQ58A44 107 aa4.54□□□□□ -1.68
VPS13B-205ENST00000493587 H0Y9J4 135 aa4.54□□□□□ -1.68
VPS13B-205ENST00000493587 LCE6AA0A183 80 aa4.53□□□□□ -1.68
VPS13B-205ENST00000493587 H3BUX3 64 aa4.53□□□□□ -1.68
VPS13B-205ENST00000493587 COX17Q14061 63 aa4.53□□□□□ -1.68
VPS13B-205ENST00000493587 C1orf134Q5TEV5 83 aa4.53□□□□□ -1.68
VPS13B-205ENST00000493587 C18orf65Q6ZTR6 163 aa4.53□□□□□ -1.68
VPS13B-205ENST00000493587 NOP10Q9NPE3 64 aaKnown RBP4.53□□□□□ -1.68
VPS13B-205ENST00000493587 NIPBLQ6KC79 2804 aaeCLIP4.53□□□□□ -1.68
VPS13B-205ENST00000493587 FN1P02751 2386 aaKnown RBP4.53□□□□□ -1.68
VPS13B-205ENST00000493587 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
VPS13B-205ENST00000493587 IGHV4-59P01825 116 aa4.53□□□□□ -1.68
VPS13B-205ENST00000493587 CSAG1Q6PB30 78 aa4.53□□□□□ -1.68
VPS13B-205ENST00000493587 C10orf99Q6UWK7 81 aa4.53□□□□□ -1.68
VPS13B-205ENST00000493587 Q8NDZ9 215 aa4.53□□□□□ -1.68
VPS13B-205ENST00000493587 SPANXA2-OT1Q8N9U9 137 aa4.52□□□□□ -1.69
VPS13B-205ENST00000493587 KPRPQ5T749 579 aaPredicted RBP4.52□□□□□ -1.69
VPS13B-205ENST00000493587 Q6YL49 198 aa4.52□□□□□ -1.69
VPS13B-205ENST00000493587 FLNAP21333 2647 aaKnown RBP4.52□□□□□ -1.69
VPS13B-205ENST00000493587 NAV2Q8IVL1 2488 aa4.52□□□□□ -1.69
VPS13B-205ENST00000493587 F8P00451 2351 aa4.52□□□□□ -1.69
VPS13B-205ENST00000493587 A0A096LPF7 62 aa4.51□□□□□ -1.69
VPS13B-205ENST00000493587 UNQ6190/PRO20217Q6UXQ8 127 aa4.51□□□□□ -1.69
VPS13B-205ENST00000493587 ZNF702PQ9H963 129 aa4.51□□□□□ -1.69
VPS13B-205ENST00000493587 LINC01558Q9Y6Z2 57 aa4.51□□□□□ -1.69
VPS13B-205ENST00000493587 LYSTQ99698 3801 aa4.51□□□□□ -1.69
VPS13B-205ENST00000493587 PLA2G1BP04054 148 aaKnown RBP4.51□□□□□ -1.69
VPS13B-205ENST00000493587 ODF3L2Q3SX64 289 aa4.51□□□□□ -1.69
VPS13B-205ENST00000493587 KCNQ1DNQ9H478 68 aa4.5□□□□□ -1.69
VPS13B-205ENST00000493587 IGLV6-57P01721 117 aa4.5□□□□□ -1.69
VPS13B-205ENST00000493587 C1orf137Q5JT78 98 aa4.5□□□□□ -1.69
VPS13B-205ENST00000493587 ANGP03950 147 aaKnown RBP4.49□□□□□ -1.69
VPS13B-205ENST00000493587 DEFB136Q30KP8 78 aa4.49□□□□□ -1.69
VPS13B-205ENST00000493587 CSMD3Q7Z407 3707 aa4.48□□□□□ -1.69
VPS13B-205ENST00000493587 DSCR10P59022 87 aa4.48□□□□□ -1.69
VPS13B-205ENST00000493587 CHCHD10Q8WYQ3 142 aaPredicted RBP4.48□□□□□ -1.69
VPS13B-205ENST00000493587 KIAA0087Q14695 138 aa4.48□□□□□ -1.69
VPS13B-205ENST00000493587 JMJD1CQ15652 2540 aa4.47□□□□□ -1.69
VPS13B-205ENST00000493587 J3QKU1 62 aa4.47□□□□□ -1.69
VPS13B-205ENST00000493587 TLN2Q9Y4G6 2542 aa4.47□□□□□ -1.69
VPS13B-205ENST00000493587 IGHV4-30-4P0DP06 118 aa4.47□□□□□ -1.69
VPS13B-205ENST00000493587 CYSRT1A8MQ03 144 aa4.46□□□□□ -1.7
VPS13B-205ENST00000493587 A0A1W2PNM2 257 aa4.46□□□□□ -1.7
VPS13B-205ENST00000493587 DEFB130BP0DP73 79 aa4.46□□□□□ -1.7
VPS13B-205ENST00000493587 DEFB130AP0DP74 79 aa4.46□□□□□ -1.7
VPS13B-205ENST00000493587 DNAH7Q8WXX0 4024 aa4.46□□□□□ -1.7
VPS13B-205ENST00000493587 H3BPC8 53 aa4.45□□□□□ -1.7
VPS13B-205ENST00000493587 IGHV6-1A0A0B4J1U7 121 aa4.45□□□□□ -1.7
VPS13B-205ENST00000493587 Q8NBF4 154 aa4.45□□□□□ -1.7
VPS13B-205ENST00000493587 MYO9AB2RTY4 2548 aa4.45□□□□□ -1.7
VPS13B-205ENST00000493587 RPL37AP61513 92 aaKnown RBP4.44□□□□□ -1.7
VPS13B-205ENST00000493587 FASNP49327 2511 aaKnown RBP4.44□□□□□ -1.7
VPS13B-205ENST00000493587 SETXQ7Z333 2677 aaKnown RBP4.44□□□□□ -1.7
VPS13B-205ENST00000493587 GYPEP15421 78 aa4.44□□□□□ -1.7
VPS13B-205ENST00000493587 VWFP04275 2813 aa4.44□□□□□ -1.7
VPS13B-205ENST00000493587 IGKV2D-24A0A075B6R9 120 aa4.44□□□□□ -1.7
VPS13B-205ENST00000493587 IGLV1-51P01701 117 aa4.44□□□□□ -1.7
VPS13B-205ENST00000493587 MAP6D1Q9H9H5 199 aa4.44□□□□□ -1.7
VPS13B-205ENST00000493587 ACANP16112 2415 aa4.43□□□□□ -1.7
VPS13B-205ENST00000493587 Q6ZR54 194 aa4.43□□□□□ -1.7
VPS13B-205ENST00000493587 HECTD1Q9ULT8 2610 aa4.43□□□□□ -1.7
VPS13B-205ENST00000493587 PRKDCP78527 4128 aaKnown RBP4.43□□□□□ -1.7
VPS13B-205ENST00000493587 SLURP1P55000 103 aa4.42□□□□□ -1.7
VPS13B-205ENST00000493587 LINC00528Q8N1L1 170 aa4.42□□□□□ -1.7
VPS13B-205ENST00000493587 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms