RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 PLA2G2DQ9UNK4 145 aa7.84□□□□□ -1.15
SRGAP3-210ENST00000491467 RNF213Q63HN8 5207 aa7.83□□□□□ -1.16
SRGAP3-210ENST00000491467 TMEM256-PLSCR3K7ERE1 68 aa7.83□□□□□ -1.16
SRGAP3-210ENST00000491467 RTL8CO15255 209 aa7.83□□□□□ -1.16
SRGAP3-210ENST00000491467 PCP4P48539 62 aa7.83□□□□□ -1.16
SRGAP3-210ENST00000491467 Q9HAA7 133 aa7.83□□□□□ -1.16
SRGAP3-210ENST00000491467 VPREB1P12018 145 aa7.82□□□□□ -1.16
SRGAP3-210ENST00000491467 RPL18AQ02543 176 aaKnown RBP7.82□□□□□ -1.16
SRGAP3-210ENST00000491467 C6orf99Q4VX62 202 aa7.82□□□□□ -1.16
SRGAP3-210ENST00000491467 LINC00575Q6W349 94 aa7.82□□□□□ -1.16
SRGAP3-210ENST00000491467 APLNQ9ULZ1 77 aa7.82□□□□□ -1.16
SRGAP3-210ENST00000491467 SERTAD4-AS1Q5TG53 156 aa7.81□□□□□ -1.16
SRGAP3-210ENST00000491467 Q8NDZ9 215 aa7.81□□□□□ -1.16
SRGAP3-210ENST00000491467 OBSCN-AS1Q96MR7 158 aa7.81□□□□□ -1.16
SRGAP3-210ENST00000491467 C22orf24Q9Y442 160 aa7.81□□□□□ -1.16
SRGAP3-210ENST00000491467 hADV29S1A0JD25 119 aa7.8□□□□□ -1.16
SRGAP3-210ENST00000491467 USP17L23D6RBM5 183 aa7.8□□□□□ -1.16
SRGAP3-210ENST00000491467 JMJD7-PLA2G4BH0Y9G9 81 aa7.8□□□□□ -1.16
SRGAP3-210ENST00000491467 DIRC1Q969H9 104 aa7.8□□□□□ -1.16
SRGAP3-210ENST00000491467 XAGE1AQ9HD64 81 aa7.8□□□□□ -1.16
SRGAP3-210ENST00000491467 LRP1BQ9NZR2 4599 aa7.79□□□□□ -1.16
SRGAP3-210ENST00000491467 TRAV23DV6A0A075B6W5 121 aa7.79□□□□□ -1.16
SRGAP3-210ENST00000491467 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
SRGAP3-210ENST00000491467 C14orf177Q52M58 125 aa7.78□□□□□ -1.16
SRGAP3-210ENST00000491467 Q6ZRP5 223 aa7.78□□□□□ -1.16
SRGAP3-210ENST00000491467 UBE2DNLQ8IWF7 75 aa7.78□□□□□ -1.16
SRGAP3-210ENST00000491467 IGLV5-37A0A075B6J1 123 aa7.77□□□□□ -1.17
SRGAP3-210ENST00000491467 ZNF73O43830 326 aaPredicted RBP7.77□□□□□ -1.17
SRGAP3-210ENST00000491467 FLG2Q5D862 2391 aaPredicted RBP7.76□□□□□ -1.17
SRGAP3-210ENST00000491467 LOC107984640A0A0U1RRK4 108 aa7.76□□□□□ -1.17
SRGAP3-210ENST00000491467 COX7BP24311 80 aa7.76□□□□□ -1.17
SRGAP3-210ENST00000491467 C21orf62-AS1Q17RA5 79 aa7.76□□□□□ -1.17
SRGAP3-210ENST00000491467 GAGE2EQ4V326 116 aa7.76□□□□□ -1.17
SRGAP3-210ENST00000491467 TTC32Q5I0X7 151 aa7.76□□□□□ -1.17
SRGAP3-210ENST00000491467 Q6Q795 121 aa7.76□□□□□ -1.17
SRGAP3-210ENST00000491467 NKAPP1Q8N9T2 125 aa7.76□□□□□ -1.17
SRGAP3-210ENST00000491467 GAGE2DQ9UEU5 116 aa7.76□□□□□ -1.17
SRGAP3-210ENST00000491467 XGP55808 180 aa7.75□□□□□ -1.17
SRGAP3-210ENST00000491467 ELOF1P60002 83 aaKnown RBP7.75□□□□□ -1.17
SRGAP3-210ENST00000491467 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.75□□□□□ -1.17
SRGAP3-210ENST00000491467 PKIGQ9Y2B9 76 aa7.75□□□□□ -1.17
SRGAP3-210ENST00000491467 M0R2N4 97 aa7.74□□□□□ -1.17
SRGAP3-210ENST00000491467 C9orf129Q5T035 196 aaKnown RBP7.74□□□□□ -1.17
SRGAP3-210ENST00000491467 SDIM1Q6ZPB5 146 aa7.74□□□□□ -1.17
SRGAP3-210ENST00000491467 MT-ATP8P03928 68 aa7.73□□□□□ -1.17
SRGAP3-210ENST00000491467 SLPIP03973 132 aa7.73□□□□□ -1.17
SRGAP3-210ENST00000491467 KCNQ1DNQ9H478 68 aa7.73□□□□□ -1.17
SRGAP3-210ENST00000491467 DNAH5Q8TE73 4624 aa7.73□□□□□ -1.17
SRGAP3-210ENST00000491467 PDE6GP18545 87 aa7.72□□□□□ -1.17
SRGAP3-210ENST00000491467 CNBPP62633 177 aaKnown RBP7.72□□□□□ -1.17
SRGAP3-210ENST00000491467 IMUPQ9GZP8 106 aa7.72□□□□□ -1.17
SRGAP3-210ENST00000491467 PSCAO43653 123 aa7.71□□□□□ -1.18
SRGAP3-210ENST00000491467 CCKP06307 115 aa7.71□□□□□ -1.18
SRGAP3-210ENST00000491467 LINC00643Q86TS7 51 aa7.71□□□□□ -1.18
SRGAP3-210ENST00000491467 PRYO14603 147 aa7.7□□□□□ -1.18
SRGAP3-210ENST00000491467 GAGE2BQ13066 116 aa7.7□□□□□ -1.18
SRGAP3-210ENST00000491467 GAGE2AQ6NT46 116 aa7.7□□□□□ -1.18
SRGAP3-210ENST00000491467 LINC00528Q8N1L1 170 aa7.7□□□□□ -1.18
SRGAP3-210ENST00000491467 C14orf132Q9NPU4 83 aa7.69□□□□□ -1.18
SRGAP3-210ENST00000491467 VPS13BQ7Z7G8 4022 aa7.68□□□□□ -1.18
SRGAP3-210ENST00000491467 RBM3P98179 157 aaKnown RBP7.68□□□□□ -1.18
SRGAP3-210ENST00000491467 Q6ZQY7 126 aa7.68□□□□□ -1.18
SRGAP3-210ENST00000491467 C7orf33Q8WU49 177 aa7.68□□□□□ -1.18
SRGAP3-210ENST00000491467 IGLV1-50A0A075B6I6 118 aa7.67□□□□□ -1.18
SRGAP3-210ENST00000491467 LOC110117498A0A087WWA1 95 aa7.67□□□□□ -1.18
SRGAP3-210ENST00000491467 TRBV7-7A0A0K0K1E9 115 aa7.67□□□□□ -1.18
SRGAP3-210ENST00000491467 NBDYA0A0U1RRE5 68 aa7.67□□□□□ -1.18
SRGAP3-210ENST00000491467 DHRS4-AS1Q9P1J3 65 aa7.67□□□□□ -1.18
SRGAP3-210ENST00000491467 SPRR1AP35321 89 aa7.66□□□□□ -1.18
SRGAP3-210ENST00000491467 Q5VSD8 79 aa7.66□□□□□ -1.18
SRGAP3-210ENST00000491467 KRTAP1-5Q9BYS1 174 aa7.66□□□□□ -1.18
SRGAP3-210ENST00000491467 LAMTOR3Q9UHA4 124 aa7.66□□□□□ -1.18
SRGAP3-210ENST00000491467 MRPL55Q7Z7F7 128 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-210ENST00000491467 DSCR8Q96T75 97 aa7.63□□□□□ -1.19
SRGAP3-210ENST00000491467 A0A1B0GV72 72 aa7.62□□□□□ -1.19
SRGAP3-210ENST00000491467 ETDCA0A1B0GVM5 59 aa7.62□□□□□ -1.19
SRGAP3-210ENST00000491467 KRTAP4-16G5E9R7 235 aaPredicted RBP7.62□□□□□ -1.19
SRGAP3-210ENST00000491467 Q6JHZ5 121 aa7.62□□□□□ -1.19
SRGAP3-210ENST00000491467 Q6ZQT0 140 aa7.62□□□□□ -1.19
SRGAP3-210ENST00000491467 Q6ZRX8 168 aa7.62□□□□□ -1.19
SRGAP3-210ENST00000491467 LINC00474Q9P2X8 69 aa7.62□□□□□ -1.19
SRGAP3-210ENST00000491467 B5MCH6 92 aa7.61□□□□□ -1.19
SRGAP3-210ENST00000491467 NDUFV3P56181 108 aaKnown RBP7.61□□□□□ -1.19
SRGAP3-210ENST00000491467 C9orf163Q8N9P6 203 aa7.61□□□□□ -1.19
SRGAP3-210ENST00000491467 SMCR5Q8TEV8 140 aa7.61□□□□□ -1.19
SRGAP3-210ENST00000491467 FAT1Q14517 4588 aa7.61□□□□□ -1.19
SRGAP3-210ENST00000491467 LRCOL1A6NCL2 159 aa7.6□□□□□ -1.19
SRGAP3-210ENST00000491467 ATP5EP2Q5VTU8 51 aa7.6□□□□□ -1.19
SRGAP3-210ENST00000491467 TRBV7-4A0A0J9YYF1 115 aa7.59□□□□□ -1.19
SRGAP3-210ENST00000491467 REG3GQ6UW15 175 aa7.59□□□□□ -1.19
SRGAP3-210ENST00000491467 Q6ZRN7 208 aaPredicted RBP7.59□□□□□ -1.19
SRGAP3-210ENST00000491467 KRTAP7-1Q8IUC3 87 aa7.59□□□□□ -1.19
SRGAP3-210ENST00000491467 LINC00846Q9NV44 126 aa7.59□□□□□ -1.19
SRGAP3-210ENST00000491467 A0A096LNI7 61 aa7.58□□□□□ -1.2
SRGAP3-210ENST00000491467 FAM168BA1KXE4 195 aa7.58□□□□□ -1.2
SRGAP3-210ENST00000491467 FAM19A5Q7Z5A7 132 aaPredicted RBP7.58□□□□□ -1.2
SRGAP3-210ENST00000491467 UBL5Q9BZL1 73 aa7.58□□□□□ -1.2
SRGAP3-210ENST00000491467 A0A1B0GW54 56 aa7.57□□□□□ -1.2
SRGAP3-210ENST00000491467 RPL37AP8A6NKH3 93 aa7.57□□□□□ -1.2
SRGAP3-210ENST00000491467 TNP2Q05952 138 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms