RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 MTURNQ8N3F0 131 aa6.66□□□□□ -1.34
HDAC3-210ENST00000490808 TRBV10-3A0A0K0K1G6 114 aa6.65□□□□□ -1.34
HDAC3-210ENST00000490808 BAALC-AS2P0C853 105 aa6.65□□□□□ -1.34
HDAC3-210ENST00000490808 SCGB1A1P11684 91 aa6.65□□□□□ -1.34
HDAC3-210ENST00000490808 SMCPP49901 116 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-210ENST00000490808 Q6ZRN7 208 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-210ENST00000490808 ORMDL1Q9P0S3 153 aa6.65□□□□□ -1.34
HDAC3-210ENST00000490808 LINC00474Q9P2X8 69 aa6.65□□□□□ -1.34
HDAC3-210ENST00000490808 C16orf90A8MZG2 172 aa6.64□□□□□ -1.35
HDAC3-210ENST00000490808 ZNF73O43830 326 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-210ENST00000490808 SLPIP03973 132 aa6.64□□□□□ -1.35
HDAC3-210ENST00000490808 C9orf129Q5T035 196 aaKnown RBP6.64□□□□□ -1.35
HDAC3-210ENST00000490808 hADV29S1A0JD25 119 aa6.63□□□□□ -1.35
HDAC3-210ENST00000490808 TMEM256-PLSCR3K7ERE1 68 aa6.63□□□□□ -1.35
HDAC3-210ENST00000490808 COX7BP24311 80 aa6.63□□□□□ -1.35
HDAC3-210ENST00000490808 Q8N814 137 aa6.63□□□□□ -1.35
HDAC3-210ENST00000490808 PRYO14603 147 aa6.62□□□□□ -1.35
HDAC3-210ENST00000490808 INAFM2P0DMQ5 153 aa6.62□□□□□ -1.35
HDAC3-210ENST00000490808 LINC00575Q6W349 94 aa6.62□□□□□ -1.35
HDAC3-210ENST00000490808 C9orf163Q8N9P6 203 aa6.62□□□□□ -1.35
HDAC3-210ENST00000490808 Q8NDZ9 215 aa6.62□□□□□ -1.35
HDAC3-210ENST00000490808 FAM218AQ96MZ4 157 aa6.62□□□□□ -1.35
HDAC3-210ENST00000490808 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-210ENST00000490808 A0A087WYN8 130 aa6.61□□□□□ -1.35
HDAC3-210ENST00000490808 LRCOL1A6NCL2 159 aa6.61□□□□□ -1.35
HDAC3-210ENST00000490808 KCNQ1DNQ9H478 68 aa6.61□□□□□ -1.35
HDAC3-210ENST00000490808 DNAH5Q8TE73 4624 aa6.61□□□□□ -1.35
HDAC3-210ENST00000490808 DYNC1H1Q14204 4646 aaKnown RBP6.61□□□□□ -1.35
HDAC3-210ENST00000490808 MRPL55Q7Z7F7 128 aaKnown RBP6.6□□□□□ -1.35
HDAC3-210ENST00000490808 LINC00167Q96N53 147 aa6.6□□□□□ -1.35
HDAC3-210ENST00000490808 C22orf24Q9Y442 160 aa6.6□□□□□ -1.35
HDAC3-210ENST00000490808 A0A1B0GVY2 172 aa6.59□□□□□ -1.35
HDAC3-210ENST00000490808 JMJD7-PLA2G4BH0Y9G9 81 aa6.59□□□□□ -1.35
HDAC3-210ENST00000490808 ELOF1P60002 83 aaKnown RBP6.59□□□□□ -1.35
HDAC3-210ENST00000490808 TNP2Q05952 138 aa6.59□□□□□ -1.35
HDAC3-210ENST00000490808 C21orf62-AS1Q17RA5 79 aa6.59□□□□□ -1.35
HDAC3-210ENST00000490808 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-210ENST00000490808 C7orf33Q8WU49 177 aa6.59□□□□□ -1.35
HDAC3-210ENST00000490808 IGLV1-50A0A075B6I6 118 aa6.58□□□□□ -1.36
HDAC3-210ENST00000490808 A0A087WTM6 91 aa6.58□□□□□ -1.36
HDAC3-210ENST00000490808 ETDCA0A1B0GVM5 59 aa6.58□□□□□ -1.36
HDAC3-210ENST00000490808 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
HDAC3-210ENST00000490808 FAM19A5Q7Z5A7 132 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-210ENST00000490808 KRTAP4-5Q9BYR2 181 aa6.58□□□□□ -1.36
HDAC3-210ENST00000490808 DHRS4-AS1Q9P1J3 65 aa6.58□□□□□ -1.36
HDAC3-210ENST00000490808 LRP1BQ9NZR2 4599 aa6.58□□□□□ -1.36
HDAC3-210ENST00000490808 A0A096LNI7 61 aa6.57□□□□□ -1.36
HDAC3-210ENST00000490808 ACYP1P07311 99 aa6.57□□□□□ -1.36
HDAC3-210ENST00000490808 DPH3Q96FX2 82 aa6.57□□□□□ -1.36
HDAC3-210ENST00000490808 IGKV2-24A0A0C4DH68 120 aa6.56□□□□□ -1.36
HDAC3-210ENST00000490808 TEX49A0A1B0GTD5 131 aa6.56□□□□□ -1.36
HDAC3-210ENST00000490808 FAM240AA0A1B0GVK7 77 aa6.54□□□□□ -1.36
HDAC3-210ENST00000490808 FAM168BA1KXE4 195 aa6.54□□□□□ -1.36
HDAC3-210ENST00000490808 REG3GQ6UW15 175 aa6.54□□□□□ -1.36
HDAC3-210ENST00000490808 SDIM1Q6ZPB5 146 aa6.54□□□□□ -1.36
HDAC3-210ENST00000490808 LINC00528Q8N1L1 170 aa6.54□□□□□ -1.36
HDAC3-210ENST00000490808 RPL37AP8A6NKH3 93 aa6.53□□□□□ -1.36
HDAC3-210ENST00000490808 PDE6GP18545 87 aa6.53□□□□□ -1.36
HDAC3-210ENST00000490808 SPRR1AP35321 89 aa6.53□□□□□ -1.36
HDAC3-210ENST00000490808 UBE2BP63146 152 aa6.53□□□□□ -1.36
HDAC3-210ENST00000490808 Q6ZQY7 126 aa6.53□□□□□ -1.36
HDAC3-210ENST00000490808 LAMTOR3Q9UHA4 124 aa6.53□□□□□ -1.36
HDAC3-210ENST00000490808 DNAH8Q96JB1 4490 aa6.53□□□□□ -1.36
HDAC3-210ENST00000490808 Q6ZRX8 168 aa6.52□□□□□ -1.37
HDAC3-210ENST00000490808 SIGMAR1Q99720 223 aa6.52□□□□□ -1.37
HDAC3-210ENST00000490808 IGLV5-52A0A0A0MRZ9 124 aa6.51□□□□□ -1.37
HDAC3-210ENST00000490808 RBM3P98179 157 aaKnown RBP6.51□□□□□ -1.37
HDAC3-210ENST00000490808 OBSCN-AS1Q96MR7 158 aa6.51□□□□□ -1.37
HDAC3-210ENST00000490808 B5MCH6 92 aa6.5□□□□□ -1.37
HDAC3-210ENST00000490808 HERC1Q15751 4861 aa6.49□□□□□ -1.37
HDAC3-210ENST00000490808 A0A1B0GV72 72 aa6.49□□□□□ -1.37
HDAC3-210ENST00000490808 A0A1W2PNN7 141 aa6.49□□□□□ -1.37
HDAC3-210ENST00000490808 DSCR8Q96T75 97 aa6.49□□□□□ -1.37
HDAC3-210ENST00000490808 APOBP04114 4563 aaKnown RBP6.49□□□□□ -1.37
HDAC3-210ENST00000490808 GAGE2AQ6NT46 116 aa6.48□□□□□ -1.37
HDAC3-210ENST00000490808 FAM19A1Q7Z5A9 133 aa6.48□□□□□ -1.37
HDAC3-210ENST00000490808 KRTAP7-1Q8IUC3 87 aa6.48□□□□□ -1.37
HDAC3-210ENST00000490808 SPACA4Q8TDM5 124 aa6.48□□□□□ -1.37
HDAC3-210ENST00000490808 KRTAP4-16G5E9R7 235 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-210ENST00000490808 H0Y9J4 135 aa6.47□□□□□ -1.37
HDAC3-210ENST00000490808 CDK2AP2O75956 126 aa6.47□□□□□ -1.37
HDAC3-210ENST00000490808 KRTAP10-2P60368 255 aa6.47□□□□□ -1.37
HDAC3-210ENST00000490808 C14orf132Q9NPU4 83 aa6.47□□□□□ -1.37
HDAC3-210ENST00000490808 CCKP06307 115 aa6.46□□□□□ -1.38
HDAC3-210ENST00000490808 CHTF8P0CG12 524 aa6.46□□□□□ -1.38
HDAC3-210ENST00000490808 NDUFV3P56181 108 aaKnown RBP6.46□□□□□ -1.38
HDAC3-210ENST00000490808 LOC110117498A0A087WWA1 95 aa6.45□□□□□ -1.38
HDAC3-210ENST00000490808 EPM2AB3EWF7 344 aa6.45□□□□□ -1.38
HDAC3-210ENST00000490808 UBE2AP49459 152 aa6.45□□□□□ -1.38
HDAC3-210ENST00000490808 PHF5AQ7RTV0 110 aaKnown RBP6.45□□□□□ -1.38
HDAC3-210ENST00000490808 HSPG2P98160 4391 aa6.45□□□□□ -1.38
HDAC3-210ENST00000490808 DEFB105AQ8NG35 78 aa6.43□□□□□ -1.38
HDAC3-210ENST00000490808 CDIP1Q9H305 208 aa6.43□□□□□ -1.38
HDAC3-210ENST00000490808 F8WEM9 126 aa6.42□□□□□ -1.38
HDAC3-210ENST00000490808 BCE1O60756 84 aa6.42□□□□□ -1.38
HDAC3-210ENST00000490808 Q6ZSA8 131 aa6.42□□□□□ -1.38
HDAC3-210ENST00000490808 Q9BRP9 147 aa6.42□□□□□ -1.38
HDAC3-210ENST00000490808 PLAC8Q9NZF1 115 aa6.42□□□□□ -1.38
HDAC3-210ENST00000490808 UBR4Q5T4S7 5183 aa6.41□□□□□ -1.38
HDAC3-210ENST00000490808 IGLV5-48A0A075B6I7 105 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms