RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 SPRR1AP35321 89 aa4.19□□□□□ -1.74
PRPF4B-208ENST00000490653 SOSTDC1Q6X4U4 206 aa4.19□□□□□ -1.74
PRPF4B-208ENST00000490653 MYMXA0A1B0GTQ4 84 aa4.18□□□□□ -1.74
PRPF4B-208ENST00000490653 NPC2P61916 151 aa4.18□□□□□ -1.74
PRPF4B-208ENST00000490653 HERV-K104P63124 156 aa4.18□□□□□ -1.74
PRPF4B-208ENST00000490653 ADAMTSL4-AS1Q5T5F5 129 aa4.18□□□□□ -1.74
PRPF4B-208ENST00000490653 SFTA2Q6UW10 78 aa4.18□□□□□ -1.74
PRPF4B-208ENST00000490653 KCNQ1DNQ9H478 68 aa4.18□□□□□ -1.74
PRPF4B-208ENST00000490653 LOC107984156A0A0G2JMH3 177 aa4.17□□□□□ -1.74
PRPF4B-208ENST00000490653 J3QQQ9 107 aa4.17□□□□□ -1.74
PRPF4B-208ENST00000490653 PRYO14603 147 aa4.17□□□□□ -1.74
PRPF4B-208ENST00000490653 DPM2O94777 84 aa4.17□□□□□ -1.74
PRPF4B-208ENST00000490653 ARL17AQ8IVW1 177 aa4.17□□□□□ -1.74
PRPF4B-208ENST00000490653 LINC00337Q8N6G1 96 aa4.17□□□□□ -1.74
PRPF4B-208ENST00000490653 IGLV7-46A0A075B6I9 117 aa4.16□□□□□ -1.74
PRPF4B-208ENST00000490653 IGKCP01834 107 aa4.16□□□□□ -1.74
PRPF4B-208ENST00000490653 Q9BRP9 147 aa4.16□□□□□ -1.74
PRPF4B-208ENST00000490653 HSPB8Q9UJY1 196 aa4.16□□□□□ -1.74
PRPF4B-208ENST00000490653 A0A0J9YXY3 114 aa4.15□□□□□ -1.75
PRPF4B-208ENST00000490653 ETDCA0A1B0GVM5 59 aa4.15□□□□□ -1.75
PRPF4B-208ENST00000490653 DDTP30046 118 aa4.15□□□□□ -1.75
PRPF4B-208ENST00000490653 GAGE2AQ6NT46 116 aa4.15□□□□□ -1.75
PRPF4B-208ENST00000490653 Q8NBF4 154 aa4.15□□□□□ -1.75
PRPF4B-208ENST00000490653 LINC00587B1AMM8 73 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 HIST1H2BKO60814 126 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 HIST1H2BJP06899 126 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 LGALS3P17931 250 aaKnown RBP4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 HIST1H2BOP23527 126 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 HIST1H2BBP33778 126 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 HIST1H2BDP58876 126 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 HIST1H2BCP62807 126 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 HIST2H2BEQ16778 126 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 ST20-AS1Q8NBB2 130 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 HIST1H2BHQ93079 126 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 HIST1H2BNQ99877 126 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 HIST1H2BMQ99879 126 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 MAP1LC3CQ9BXW4 147 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 TTTY13Q9BZ97 58 aa4.14□□□□□ -1.75
PRPF4B-208ENST00000490653 IGLV9-49A0A0B4J1Y8 123 aa4.13□□□□□ -1.75
PRPF4B-208ENST00000490653 E9PLD3 99 aa4.13□□□□□ -1.75
PRPF4B-208ENST00000490653 SYS1-DBNDD2H3BUS1 97 aa4.13□□□□□ -1.75
PRPF4B-208ENST00000490653 IGLV6-57P01721 117 aa4.13□□□□□ -1.75
PRPF4B-208ENST00000490653 PLNP26678 52 aa4.13□□□□□ -1.75
PRPF4B-208ENST00000490653 HERVK_113P61574 105 aa4.13□□□□□ -1.75
PRPF4B-208ENST00000490653 LINC00483Q53H64 154 aa4.13□□□□□ -1.75
PRPF4B-208ENST00000490653 LITAFQ99732 161 aa4.13□□□□□ -1.75
PRPF4B-208ENST00000490653 TRBV10-2A0A0K0K1G8 114 aa4.12□□□□□ -1.75
PRPF4B-208ENST00000490653 IGKV2-30P06310 120 aa4.12□□□□□ -1.75
PRPF4B-208ENST00000490653 NMUP48645 174 aa4.12□□□□□ -1.75
PRPF4B-208ENST00000490653 NDUFC2O95298 119 aa4.11□□□□□ -1.75
PRPF4B-208ENST00000490653 C3orf79P0CE67 100 aa4.11□□□□□ -1.75
PRPF4B-208ENST00000490653 MOBPQ13875 183 aa4.11□□□□□ -1.75
PRPF4B-208ENST00000490653 TPRXLQ17RH7 258 aa4.11□□□□□ -1.75
PRPF4B-208ENST00000490653 S100A7L2Q5SY68 101 aa4.11□□□□□ -1.75
PRPF4B-208ENST00000490653 LINC01545Q5VT33 79 aa4.11□□□□□ -1.75
PRPF4B-208ENST00000490653 SPAG11AQ6PDA7 123 aa4.11□□□□□ -1.75
PRPF4B-208ENST00000490653 LINC00308Q8TCZ7 52 aa4.11□□□□□ -1.75
PRPF4B-208ENST00000490653 KRTAP4-1Q9BYQ7 146 aa4.11□□□□□ -1.75
PRPF4B-208ENST00000490653 SPANXB1Q9NS25 103 aaPredicted RBP4.11□□□□□ -1.75
PRPF4B-208ENST00000490653 ZNF706Q9Y5V0 76 aaPredicted RBP4.11□□□□□ -1.75
PRPF4B-208ENST00000490653 TRAV23DV6A0A075B6W5 121 aa4.1□□□□□ -1.75
PRPF4B-208ENST00000490653 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
PRPF4B-208ENST00000490653 Q6ZRX8 168 aa4.1□□□□□ -1.75
PRPF4B-208ENST00000490653 MIEN1Q9BRT3 115 aa4.1□□□□□ -1.75
PRPF4B-208ENST00000490653 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
PRPF4B-208ENST00000490653 ZNF73O43830 326 aaPredicted RBP4.09□□□□□ -1.75
PRPF4B-208ENST00000490653 CTAG1AP78358 180 aa4.09□□□□□ -1.75
PRPF4B-208ENST00000490653 KRTAP13-3Q3SY46 172 aa4.09□□□□□ -1.75
PRPF4B-208ENST00000490653 PET117Q6UWS5 81 aa4.09□□□□□ -1.75
PRPF4B-208ENST00000490653 SSBP3-AS1Q7Z2R9 100 aa4.09□□□□□ -1.75
PRPF4B-208ENST00000490653 ZNF815PA8K554 130 aa4.08□□□□□ -1.76
PRPF4B-208ENST00000490653 SPINK1P00995 79 aa4.08□□□□□ -1.76
PRPF4B-208ENST00000490653 Q8N377 158 aa4.08□□□□□ -1.76
PRPF4B-208ENST00000490653 OR13C6PQ8NH95 151 aa4.08□□□□□ -1.76
PRPF4B-208ENST00000490653 KRTDAPP60985 99 aa4.07□□□□□ -1.76
PRPF4B-208ENST00000490653 S100A12P80511 92 aa4.07□□□□□ -1.76
PRPF4B-208ENST00000490653 HRCT1Q6UXD1 115 aa4.07□□□□□ -1.76
PRPF4B-208ENST00000490653 ATOH7Q8N100 152 aa4.07□□□□□ -1.76
PRPF4B-208ENST00000490653 TMA7Q9Y2S6 64 aaKnown RBP4.07□□□□□ -1.76
PRPF4B-208ENST00000490653 A0A0U1RQV1 116 aa4.06□□□□□ -1.76
PRPF4B-208ENST00000490653 TIMM17BO60830 172 aa4.06□□□□□ -1.76
PRPF4B-208ENST00000490653 COA6Q5JTJ3 125 aaKnown RBP4.06□□□□□ -1.76
PRPF4B-208ENST00000490653 C9orf153Q5TBE3 101 aa4.06□□□□□ -1.76
PRPF4B-208ENST00000490653 FP248Q71RG6 208 aaPredicted RBP4.06□□□□□ -1.76
PRPF4B-208ENST00000490653 SPANXCQ9NY87 97 aa4.06□□□□□ -1.76
PRPF4B-208ENST00000490653 A0A0G2JQZ4 141 aa4.05□□□□□ -1.76
PRPF4B-208ENST00000490653 C6orf99Q4VX62 202 aa4.05□□□□□ -1.76
PRPF4B-208ENST00000490653 PCP2Q8IVA1 136 aa4.05□□□□□ -1.76
PRPF4B-208ENST00000490653 MUSTN1Q8IVN3 82 aa4.05□□□□□ -1.76
PRPF4B-208ENST00000490653 SPRR1BP22528 89 aa4.04□□□□□ -1.76
PRPF4B-208ENST00000490653 COX7BP24311 80 aa4.04□□□□□ -1.76
PRPF4B-208ENST00000490653 JOSD1Q15040 202 aaPredicted RBP4.04□□□□□ -1.76
PRPF4B-208ENST00000490653 DEFB105AQ8NG35 78 aa4.04□□□□□ -1.76
PRPF4B-208ENST00000490653 LINC01547P58512 204 aaPredicted RBP4.03□□□□□ -1.76
PRPF4B-208ENST00000490653 ASB16-AS1Q495Z4 193 aa4.03□□□□□ -1.76
PRPF4B-208ENST00000490653 SMIM29Q86T20 159 aa4.03□□□□□ -1.76
PRPF4B-208ENST00000490653 SPANXDQ9BXN6 97 aa4.03□□□□□ -1.76
PRPF4B-208ENST00000490653 SLC25A20O43772 301 aa4.02□□□□□ -1.77
PRPF4B-208ENST00000490653 HINT1P49773 126 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms