RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 ERC2-IT1O76042 136 aa2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 PDE6GP18545 87 aa2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 CXCL6P80162 114 aa2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 Q6ZQT0 140 aa2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 FP248Q71RG6 208 aaPredicted RBP2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 FAM19A1Q7Z5A9 133 aa2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 C20orf197Q8N268 126 aa2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 C6orf223Q8N319 242 aa2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 Q8N814 137 aa2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 UBE2E2Q96LR5 201 aa2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 UBL5Q9BZL1 73 aa2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 DNAH3Q8TD57 4116 aa2.34□□□□□ -2.03
CRNKL1-203ENST00000490258 MXRA5Q9NR99 2828 aa2.34□□□□□ -2.04
CRNKL1-203ENST00000490258 RYR3Q15413 4870 aa2.33□□□□□ -2.04
CRNKL1-203ENST00000490258 TRBV7-4A0A0J9YYF1 115 aa2.33□□□□□ -2.04
CRNKL1-203ENST00000490258 H3BQ85 93 aa2.33□□□□□ -2.04
CRNKL1-203ENST00000490258 DEFB131AP59861 70 aa2.33□□□□□ -2.04
CRNKL1-203ENST00000490258 ENHOQ6UWT2 76 aa2.33□□□□□ -2.04
CRNKL1-203ENST00000490258 Q8IZM0 81 aa2.33□□□□□ -2.04
CRNKL1-203ENST00000490258 C1orf158Q8N1D5 194 aa2.33□□□□□ -2.04
CRNKL1-203ENST00000490258 TMEM86BQ8N661 226 aa2.33□□□□□ -2.04
CRNKL1-203ENST00000490258 MUC7Q8TAX7 377 aa2.33□□□□□ -2.04
CRNKL1-203ENST00000490258 DYNLRB2Q8TF09 96 aa2.33□□□□□ -2.04
CRNKL1-203ENST00000490258 NBEAL2Q6ZNJ1 2754 aa2.32□□□□□ -2.04
CRNKL1-203ENST00000490258 HIVEP2P31629 2446 aa2.32□□□□□ -2.04
CRNKL1-203ENST00000490258 TRAV23DV6A0A075B6W5 121 aa2.32□□□□□ -2.04
CRNKL1-203ENST00000490258 LOC100131303A0A0U1RQF7 123 aa2.32□□□□□ -2.04
CRNKL1-203ENST00000490258 PLAC8L1A1L4L8 177 aa2.32□□□□□ -2.04
CRNKL1-203ENST00000490258 DEFB4AO15263 64 aa2.32□□□□□ -2.04
CRNKL1-203ENST00000490258 LINC01547P58512 204 aaPredicted RBP2.32□□□□□ -2.04
CRNKL1-203ENST00000490258 LINC00158P58513 81 aa2.32□□□□□ -2.04
CRNKL1-203ENST00000490258 COX17Q14061 63 aa2.32□□□□□ -2.04
CRNKL1-203ENST00000490258 LINC00575Q6W349 94 aa2.32□□□□□ -2.04
CRNKL1-203ENST00000490258 PKD1L1Q8TDX9 2849 aa2.32□□□□□ -2.04
CRNKL1-203ENST00000490258 TENM1Q9UKZ4 2725 aa2.32□□□□□ -2.04
CRNKL1-203ENST00000490258 SORL1Q92673 2214 aa2.32□□□□□ -2.04
CRNKL1-203ENST00000490258 TRBV6-8A0A0A6YYG3 113 aa2.31□□□□□ -2.04
CRNKL1-203ENST00000490258 TRBV7-6A0A0J9YX20 115 aa2.31□□□□□ -2.04
CRNKL1-203ENST00000490258 DEFB114Q30KQ6 69 aa2.31□□□□□ -2.04
CRNKL1-203ENST00000490258 Q6ZTI0 123 aa2.31□□□□□ -2.04
CRNKL1-203ENST00000490258 C4orf3Q8WVX3 66 aa2.31□□□□□ -2.04
CRNKL1-203ENST00000490258 KMT2CQ8NEZ4 4911 aaKnown RBP2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 IGLV4-60A0A075B6I1 120 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 TRGV1A0A0A0MS02 117 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 TRAV10A0A0B4J240 114 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 A0A0U1RQV1 116 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 LCE6AA0A183 80 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 LINC00959A0A1B0GUT2 108 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 UBE2L6O14933 153 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 IGLV6-57P01721 117 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 GIG44P09565 113 aaPredicted RBP2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 MIFP14174 115 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 HTN1P15515 57 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 RBM3P98179 157 aaKnown RBP2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 KIAA0087Q14695 138 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 LINC00612Q8N6U2 182 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 WFDC9Q8NEX5 89 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 C16orf74Q96GX8 76 aa2.3□□□□□ -2.04
CRNKL1-203ENST00000490258 HUWE1Q7Z6Z7 4374 aaKnown RBP2.29□□□□□ -2.04
CRNKL1-203ENST00000490258 LYRM9A8MSI8 78 aa2.29□□□□□ -2.04
CRNKL1-203ENST00000490258 F8WEM9 126 aa2.29□□□□□ -2.04
CRNKL1-203ENST00000490258 NREPQ16612 68 aa2.29□□□□□ -2.04
CRNKL1-203ENST00000490258 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.29□□□□□ -2.04
CRNKL1-203ENST00000490258 TMEM254Q8TBM7 123 aa2.29□□□□□ -2.04
CRNKL1-203ENST00000490258 RMI2Q96E14 147 aa2.29□□□□□ -2.04
CRNKL1-203ENST00000490258 OCR1Q9BZK8 76 aa2.29□□□□□ -2.04
CRNKL1-203ENST00000490258 TOMM7Q9P0U1 55 aa2.29□□□□□ -2.04
CRNKL1-203ENST00000490258 CELA1Q9UNI1 258 aa2.29□□□□□ -2.04
CRNKL1-203ENST00000490258 COL6A5A8TX70 2615 aa2.29□□□□□ -2.04
CRNKL1-203ENST00000490258 TRRAPQ9Y4A5 3859 aa2.29□□□□□ -2.04
CRNKL1-203ENST00000490258 GVQW2A0A096LPI5 108 aaPredicted RBP2.28□□□□□ -2.04
CRNKL1-203ENST00000490258 A0A0J9YWU9 116 aa2.28□□□□□ -2.04
CRNKL1-203ENST00000490258 M0R2N4 97 aa2.28□□□□□ -2.04
CRNKL1-203ENST00000490258 CMC4P56277 68 aaPredicted RBP2.28□□□□□ -2.04
CRNKL1-203ENST00000490258 KRTAP10-8P60410 259 aa2.28□□□□□ -2.04
CRNKL1-203ENST00000490258 DEFB135Q30KP9 77 aa2.28□□□□□ -2.04
CRNKL1-203ENST00000490258 C6orf99Q4VX62 202 aa2.28□□□□□ -2.04
CRNKL1-203ENST00000490258 CSNK1G2-AS1Q8NCQ2 148 aa2.28□□□□□ -2.04
CRNKL1-203ENST00000490258 Q8NDZ9 215 aa2.28□□□□□ -2.04
CRNKL1-203ENST00000490258 TM2D3Q9BRN9 247 aa2.28□□□□□ -2.04
CRNKL1-203ENST00000490258 VWFP04275 2813 aa2.27□□□□□ -2.05
CRNKL1-203ENST00000490258 K7EIL1 84 aa2.27□□□□□ -2.05
CRNKL1-203ENST00000490258 BPY2O14599 106 aa2.27□□□□□ -2.05
CRNKL1-203ENST00000490258 IGKV4-1P06312 121 aa2.27□□□□□ -2.05
CRNKL1-203ENST00000490258 ESRGQ1W209 222 aa2.27□□□□□ -2.05
CRNKL1-203ENST00000490258 PRR15Q8IV56 129 aa2.27□□□□□ -2.05
CRNKL1-203ENST00000490258 ZCCHC13Q8WW36 166 aaKnown RBP2.27□□□□□ -2.05
CRNKL1-203ENST00000490258 NOP10Q9NPE3 64 aaKnown RBP2.27□□□□□ -2.05
CRNKL1-203ENST00000490258 LINC00474Q9P2X8 69 aa2.27□□□□□ -2.05
CRNKL1-203ENST00000490258 LAMTOR3Q9UHA4 124 aa2.27□□□□□ -2.05
CRNKL1-203ENST00000490258 SNURFQ9Y675 71 aa2.27□□□□□ -2.05
CRNKL1-203ENST00000490258 MEGF8Q7Z7M0 2845 aa2.27□□□□□ -2.05
CRNKL1-203ENST00000490258 TRGV2A0A075B6R0 118 aa2.26□□□□□ -2.05
CRNKL1-203ENST00000490258 A0A096LPF7 62 aa2.26□□□□□ -2.05
CRNKL1-203ENST00000490258 A0A1B0GW54 56 aa2.26□□□□□ -2.05
CRNKL1-203ENST00000490258 hDV103S1A0JD37 113 aa2.26□□□□□ -2.05
CRNKL1-203ENST00000490258 IGLV1-51P01701 117 aa2.26□□□□□ -2.05
CRNKL1-203ENST00000490258 COX7BP24311 80 aa2.26□□□□□ -2.05
CRNKL1-203ENST00000490258 ELOF1P60002 83 aaKnown RBP2.26□□□□□ -2.05
CRNKL1-203ENST00000490258 PRR3P79522 188 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms