RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 M0R378 163 aa11.22□□□□□ -0.61
APTX-229ENST00000489583 SPATA45Q537H7 98 aa11.22□□□□□ -0.61
APTX-229ENST00000489583 PYY3Q5JQD4 70 aa11.22□□□□□ -0.61
APTX-229ENST00000489583 COPS9Q8WXC6 57 aa11.22□□□□□ -0.61
APTX-229ENST00000489583 LOC107984156A0A0G2JMH3 177 aa11.21□□□□□ -0.61
APTX-229ENST00000489583 ADAMTSL4-AS1Q5T5F5 129 aa11.21□□□□□ -0.61
APTX-229ENST00000489583 ARL17AQ8IVW1 177 aa11.21□□□□□ -0.61
APTX-229ENST00000489583 COX8AP10176 69 aa11.2□□□□□ -0.62
APTX-229ENST00000489583 Q6ZVH6 145 aa11.2□□□□□ -0.62
APTX-229ENST00000489583 LITAFQ99732 161 aa11.2□□□□□ -0.62
APTX-229ENST00000489583 NPC2P61916 151 aa11.19□□□□□ -0.62
APTX-229ENST00000489583 LCE2AQ5TA79 106 aaPredicted RBP11.19□□□□□ -0.62
APTX-229ENST00000489583 C3orf22Q8N5N4 141 aa11.19□□□□□ -0.62
APTX-229ENST00000489583 SPANXDQ9BXN6 97 aa11.19□□□□□ -0.62
APTX-229ENST00000489583 SPANXCQ9NY87 97 aa11.19□□□□□ -0.62
APTX-229ENST00000489583 FP248Q71RG6 208 aaPredicted RBP11.18□□□□□ -0.62
APTX-229ENST00000489583 LINC00308Q8TCZ7 52 aa11.18□□□□□ -0.62
APTX-229ENST00000489583 DLEU1O43261 78 aa11.17□□□□□ -0.62
APTX-229ENST00000489583 NDUFC2O95298 119 aa11.17□□□□□ -0.62
APTX-229ENST00000489583 S100A12P80511 92 aa11.17□□□□□ -0.62
APTX-229ENST00000489583 IFITM1P13164 125 aa11.16□□□□□ -0.62
APTX-229ENST00000489583 Q8NDZ9 215 aa11.15□□□□□ -0.62
APTX-229ENST00000489583 C14orf144Q96I85 54 aa11.15□□□□□ -0.62
APTX-229ENST00000489583 SPRR4Q96PI1 79 aa11.15□□□□□ -0.62
APTX-229ENST00000489583 SPANXB1Q9NS25 103 aaPredicted RBP11.15□□□□□ -0.62
APTX-229ENST00000489583 TRBV10-2A0A0K0K1G8 114 aa11.14□□□□□ -0.63
APTX-229ENST00000489583 NCR3O14931 201 aa11.14□□□□□ -0.63
APTX-229ENST00000489583 SLC25A34Q6PIV7 304 aa11.14□□□□□ -0.63
APTX-229ENST00000489583 SOSTDC1Q6X4U4 206 aa11.14□□□□□ -0.63
APTX-229ENST00000489583 FAT4Q6V0I7 4981 aa11.14□□□□□ -0.63
APTX-229ENST00000489583 ETDCA0A1B0GVM5 59 aa11.12□□□□□ -0.63
APTX-229ENST00000489583 PRYO14603 147 aa11.11□□□□□ -0.63
APTX-229ENST00000489583 Q8NBF4 154 aa11.11□□□□□ -0.63
APTX-229ENST00000489583 SPINK1P00995 79 aa11.1□□□□□ -0.63
APTX-229ENST00000489583 S100A7L2Q5SY68 101 aa11.1□□□□□ -0.63
APTX-229ENST00000489583 LINC00518Q8N0U6 118 aa11.1□□□□□ -0.63
APTX-229ENST00000489583 EIF4EBP3O60516 100 aaPredicted RBP11.09□□□□□ -0.63
APTX-229ENST00000489583 MUSTN1Q8IVN3 82 aa11.09□□□□□ -0.63
APTX-229ENST00000489583 SMIM6P0DI80 62 aa11.08□□□□□ -0.64
APTX-229ENST00000489583 HIST1H4GQ99525 98 aa11.08□□□□□ -0.64
APTX-229ENST00000489583 CBY1Q9Y3M2 126 aa11.08□□□□□ -0.64
APTX-229ENST00000489583 DDTP30046 118 aa11.07□□□□□ -0.64
APTX-229ENST00000489583 LINC01547P58512 204 aaPredicted RBP11.07□□□□□ -0.64
APTX-229ENST00000489583 HIGD1BQ9P298 99 aa11.07□□□□□ -0.64
APTX-229ENST00000489583 TRBV10-3A0A0K0K1G6 114 aa11.06□□□□□ -0.64
APTX-229ENST00000489583 SMCR5Q8TEV8 140 aa11.06□□□□□ -0.64
APTX-229ENST00000489583 KRTAP9-6A0A140TA67 174 aa11.05□□□□□ -0.64
APTX-229ENST00000489583 SEC61BP60468 96 aaKnown RBP11.05□□□□□ -0.64
APTX-229ENST00000489583 LOC105371267A0A1B0GV96 52 aa11.04□□□□□ -0.64
APTX-229ENST00000489583 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
APTX-229ENST00000489583 KCNQ1DNQ9H478 68 aa11.04□□□□□ -0.64
APTX-229ENST00000489583 IGLV6-57P01721 117 aa11.03□□□□□ -0.64
APTX-229ENST00000489583 UQCR10Q9UDW1 63 aa11.03□□□□□ -0.64
APTX-229ENST00000489583 MUC17Q685J3 4493 aa11.03□□□□□ -0.64
APTX-229ENST00000489583 GAGE2AQ6NT46 116 aa11.02□□□□□ -0.65
APTX-229ENST00000489583 KRTAP13-3Q3SY46 172 aa11.01□□□□□ -0.65
APTX-229ENST00000489583 ASB16-AS1Q495Z4 193 aa11.01□□□□□ -0.65
APTX-229ENST00000489583 C2orf91Q6ZV80 131 aa11.01□□□□□ -0.65
APTX-229ENST00000489583 TRAV23DV6A0A075B6W5 121 aa11□□□□□ -0.65
APTX-229ENST00000489583 IGLV9-49A0A0B4J1Y8 123 aa11□□□□□ -0.65
APTX-229ENST00000489583 TAL2Q16559 108 aa11□□□□□ -0.65
APTX-229ENST00000489583 TRAV13-2A0A0B4J235 113 aa10.99□□□□□ -0.65
APTX-229ENST00000489583 A4D1N5 150 aa10.99□□□□□ -0.65
APTX-229ENST00000489583 A6NDN8 102 aa10.99□□□□□ -0.65
APTX-229ENST00000489583 SPRR1AP35321 89 aa10.98□□□□□ -0.65
APTX-229ENST00000489583 MOBPQ13875 183 aa10.98□□□□□ -0.65
APTX-229ENST00000489583 SSBP3-AS1Q7Z2R9 100 aa10.98□□□□□ -0.65
APTX-229ENST00000489583 HINT1P49773 126 aaPredicted RBP10.97□□□□□ -0.65
APTX-229ENST00000489583 LINC00483Q53H64 154 aa10.97□□□□□ -0.65
APTX-229ENST00000489583 SLC25A20O43772 301 aa10.96□□□□□ -0.65
APTX-229ENST00000489583 RPS29P62273 56 aaKnown RBP10.96□□□□□ -0.65
APTX-229ENST00000489583 ZNF73O43830 326 aaPredicted RBP10.95□□□□□ -0.66
APTX-229ENST00000489583 TMEM238LA0A1B0GVL6 79 aa10.94□□□□□ -0.66
APTX-229ENST00000489583 A6NJY4 79 aa10.94□□□□□ -0.66
APTX-229ENST00000489583 HSD52Q0P140 79 aa10.94□□□□□ -0.66
APTX-229ENST00000489583 CEND1Q8N111 149 aa10.94□□□□□ -0.66
APTX-229ENST00000489583 C12orf57Q99622 126 aa10.93□□□□□ -0.66
APTX-229ENST00000489583 PRO1933Q9H354 126 aa10.93□□□□□ -0.66
APTX-229ENST00000489583 B5MCH6 92 aa10.92□□□□□ -0.66
APTX-229ENST00000489583 KRTAP4-16G5E9R7 235 aaPredicted RBP10.92□□□□□ -0.66
APTX-229ENST00000489583 C9orf153Q5TBE3 101 aa10.91□□□□□ -0.66
APTX-229ENST00000489583 TSTD3H0UI37 97 aa10.9□□□□□ -0.66
APTX-229ENST00000489583 Q8N377 158 aa10.9□□□□□ -0.66
APTX-229ENST00000489583 RAB37Q96AX2 223 aa10.9□□□□□ -0.66
APTX-229ENST00000489583 Q6ZRX8 168 aa10.89□□□□□ -0.67
APTX-229ENST00000489583 A0A0B4J2C4 111 aa10.87□□□□□ -0.67
APTX-229ENST00000489583 C6orf99Q4VX62 202 aa10.87□□□□□ -0.67
APTX-229ENST00000489583 ERC2-IT1O76042 136 aa10.86□□□□□ -0.67
APTX-229ENST00000489583 CFC1BP0CG36 223 aa10.86□□□□□ -0.67
APTX-229ENST00000489583 CFC1P0CG37 223 aa10.86□□□□□ -0.67
APTX-229ENST00000489583 TRBV7-6A0A0J9YX20 115 aa10.85□□□□□ -0.67
APTX-229ENST00000489583 COX7BP24311 80 aa10.85□□□□□ -0.67
APTX-229ENST00000489583 SMIM11BQ8TCY0 68 aa10.85□□□□□ -0.67
APTX-229ENST00000489583 FXYD2P54710 66 aa10.84□□□□□ -0.67
APTX-229ENST00000489583 VAMP3Q15836 100 aa10.84□□□□□ -0.67
APTX-229ENST00000489583 Q9BRP9 147 aa10.84□□□□□ -0.67
APTX-229ENST00000489583 A0A1B0GWB2 263 aa10.83□□□□□ -0.68
APTX-229ENST00000489583 ELOF1P60002 83 aaKnown RBP10.82□□□□□ -0.68
APTX-229ENST00000489583 DHRS4-AS1Q9P1J3 65 aa10.82□□□□□ -0.68
APTX-229ENST00000489583 XP32Q5T750 250 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms