RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 LINC01561Q8N1V8 128 aa5□□□□□ -1.61
SSR1-210ENST00000489567 IGKV2-24A0A0C4DH68 120 aa4.99□□□□□ -1.61
SSR1-210ENST00000489567 SPACA4Q8TDM5 124 aa4.99□□□□□ -1.61
SSR1-210ENST00000489567 TRBV7-7A0A0K0K1E9 115 aa4.98□□□□□ -1.61
SSR1-210ENST00000489567 SMIM1B2RUZ4 78 aa4.98□□□□□ -1.61
SSR1-210ENST00000489567 OXTP01178 125 aa4.98□□□□□ -1.61
SSR1-210ENST00000489567 Q5VSD8 79 aa4.98□□□□□ -1.61
SSR1-210ENST00000489567 IFI27L1Q96BM0 104 aa4.98□□□□□ -1.61
SSR1-210ENST00000489567 TOMM7Q9P0U1 55 aa4.98□□□□□ -1.61
SSR1-210ENST00000489567 HIGD1BQ9P298 99 aa4.98□□□□□ -1.61
SSR1-210ENST00000489567 C6orf48Q9UBA6 75 aa4.98□□□□□ -1.61
SSR1-210ENST00000489567 A0A087WYN8 130 aa4.98□□□□□ -1.61
SSR1-210ENST00000489567 NDUFC2-KCTD14E9PQ53 114 aa4.98□□□□□ -1.61
SSR1-210ENST00000489567 NDUFA1O15239 70 aa4.98□□□□□ -1.61
SSR1-210ENST00000489567 COX7CP15954 63 aa4.98□□□□□ -1.61
SSR1-210ENST00000489567 MRPL55Q7Z7F7 128 aaKnown RBP4.98□□□□□ -1.61
SSR1-210ENST00000489567 MRPL35Q9NZE8 188 aaKnown RBP4.98□□□□□ -1.61
SSR1-210ENST00000489567 C11orf86A6NJI1 115 aa4.97□□□□□ -1.61
SSR1-210ENST00000489567 EPM2AB3EWF7 344 aa4.97□□□□□ -1.61
SSR1-210ENST00000489567 ZNF22P17026 224 aaPredicted RBP4.97□□□□□ -1.61
SSR1-210ENST00000489567 C9orf116Q5BN46 136 aaPredicted RBP4.97□□□□□ -1.61
SSR1-210ENST00000489567 Q8IZM0 81 aa4.97□□□□□ -1.61
SSR1-210ENST00000489567 COPS9Q8WXC6 57 aa4.97□□□□□ -1.61
SSR1-210ENST00000489567 TRAV12-1A0A0B4J245 112 aa4.96□□□□□ -1.62
SSR1-210ENST00000489567 A0A0U1RQV1 116 aa4.96□□□□□ -1.62
SSR1-210ENST00000489567 LEPROTL1O95214 131 aa4.96□□□□□ -1.62
SSR1-210ENST00000489567 RPL18AQ02543 176 aaKnown RBP4.96□□□□□ -1.62
SSR1-210ENST00000489567 Q6ZRP5 223 aa4.96□□□□□ -1.62
SSR1-210ENST00000489567 CEND1Q8N111 149 aa4.96□□□□□ -1.62
SSR1-210ENST00000489567 PLAC8Q9NZF1 115 aa4.96□□□□□ -1.62
SSR1-210ENST00000489567 PRSS2P07478 247 aa4.95□□□□□ -1.62
SSR1-210ENST00000489567 KRTAP10-4P60372 401 aaPredicted RBP4.95□□□□□ -1.62
SSR1-210ENST00000489567 COX7B2Q8TF08 81 aa4.95□□□□□ -1.62
SSR1-210ENST00000489567 PCLOQ9Y6V0 5065 aa4.94□□□□□ -1.62
SSR1-210ENST00000489567 IGLV5-39A0A0G2JS06 123 aa4.94□□□□□ -1.62
SSR1-210ENST00000489567 TRBV30A0A0K0K1B3 111 aa4.94□□□□□ -1.62
SSR1-210ENST00000489567 A0A1W2PNN7 141 aa4.94□□□□□ -1.62
SSR1-210ENST00000489567 F8VRH5 84 aa4.94□□□□□ -1.62
SSR1-210ENST00000489567 TMEM170BQ5T4T1 132 aa4.94□□□□□ -1.62
SSR1-210ENST00000489567 TLX1NBP0CAT3 122 aa4.94□□□□□ -1.62
SSR1-210ENST00000489567 SCGB1C2P0DMR2 95 aa4.94□□□□□ -1.62
SSR1-210ENST00000489567 LINC01545Q5VT33 79 aa4.94□□□□□ -1.62
SSR1-210ENST00000489567 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
SSR1-210ENST00000489567 ABCA13Q86UQ4 5058 aa4.93□□□□□ -1.62
SSR1-210ENST00000489567 FAM240AA0A1B0GVK7 77 aa4.93□□□□□ -1.62
SSR1-210ENST00000489567 FAM168BA1KXE4 195 aa4.93□□□□□ -1.62
SSR1-210ENST00000489567 LINC00474Q9P2X8 69 aa4.93□□□□□ -1.62
SSR1-210ENST00000489567 SMIM26A0A096LP01 95 aa4.92□□□□□ -1.62
SSR1-210ENST00000489567 TMEM223A0PJW6 202 aa4.92□□□□□ -1.62
SSR1-210ENST00000489567 Q75L30 129 aa4.92□□□□□ -1.62
SSR1-210ENST00000489567 KRTAP7-1Q8IUC3 87 aa4.92□□□□□ -1.62
SSR1-210ENST00000489567 VPS13BQ7Z7G8 4022 aa4.92□□□□□ -1.62
SSR1-210ENST00000489567 ATOX1O00244 68 aa4.92□□□□□ -1.62
SSR1-210ENST00000489567 IGKCP01834 107 aa4.92□□□□□ -1.62
SSR1-210ENST00000489567 CXCL5P42830 114 aa4.92□□□□□ -1.62
SSR1-210ENST00000489567 C9orf129Q5T035 196 aaKnown RBP4.92□□□□□ -1.62
SSR1-210ENST00000489567 PRR26Q8N8Z3 221 aa4.92□□□□□ -1.62
SSR1-210ENST00000489567 LINC01600Q96MT4 127 aa4.92□□□□□ -1.62
SSR1-210ENST00000489567 SERP1Q9Y6X1 66 aa4.92□□□□□ -1.62
SSR1-210ENST00000489567 SRRM2Q9UQ35 2752 aaKnown RBP4.91□□□□□ -1.62
SSR1-210ENST00000489567 RPL37AP61513 92 aaKnown RBP4.91□□□□□ -1.62
SSR1-210ENST00000489567 INAFM2P0DMQ5 153 aa4.9□□□□□ -1.62
SSR1-210ENST00000489567 XAGE1AQ9HD64 81 aa4.9□□□□□ -1.62
SSR1-210ENST00000489567 PHF5AQ7RTV0 110 aaKnown RBP4.9□□□□□ -1.63
SSR1-210ENST00000489567 ZNF625Q96I27 306 aaPredicted RBP4.9□□□□□ -1.63
SSR1-210ENST00000489567 NPC2P61916 151 aa4.89□□□□□ -1.63
SSR1-210ENST00000489567 KRTAP11-1Q8IUC1 163 aa4.89□□□□□ -1.63
SSR1-210ENST00000489567 PRR15Q8IV56 129 aa4.89□□□□□ -1.63
SSR1-210ENST00000489567 ACYP1P07311 99 aa4.88□□□□□ -1.63
SSR1-210ENST00000489567 PLNP26678 52 aa4.88□□□□□ -1.63
SSR1-210ENST00000489567 TSPEAR-AS2P59090 65 aa4.88□□□□□ -1.63
SSR1-210ENST00000489567 C7orf33Q8WU49 177 aa4.88□□□□□ -1.63
SSR1-210ENST00000489567 BRK1Q8WUW1 75 aa4.88□□□□□ -1.63
SSR1-210ENST00000489567 NHP2Q9NX24 153 aaKnown RBP4.88□□□□□ -1.63
SSR1-210ENST00000489567 H3BT86 120 aa4.88□□□□□ -1.63
SSR1-210ENST00000489567 FXYD2P54710 66 aa4.88□□□□□ -1.63
SSR1-210ENST00000489567 TP73-AS1Q9UF72 201 aa4.88□□□□□ -1.63
SSR1-210ENST00000489567 PRR3P79522 188 aaKnown RBP4.87□□□□□ -1.63
SSR1-210ENST00000489567 TCL1BO95988 128 aa4.86□□□□□ -1.63
SSR1-210ENST00000489567 TRBV7-6A0A0J9YX20 115 aa4.86□□□□□ -1.63
SSR1-210ENST00000489567 LEPROTO15243 131 aa4.86□□□□□ -1.63
SSR1-210ENST00000489567 FLG2Q5D862 2391 aaPredicted RBP4.86□□□□□ -1.63
SSR1-210ENST00000489567 DSCR8Q96T75 97 aa4.86□□□□□ -1.63
SSR1-210ENST00000489567 SND1-IT1Q9HBX3 110 aa4.86□□□□□ -1.63
SSR1-210ENST00000489567 NDUFA12Q9UI09 145 aa4.86□□□□□ -1.63
SSR1-210ENST00000489567 PSORS1C2Q9UIG4 136 aa4.86□□□□□ -1.63
SSR1-210ENST00000489567 MYCBP2O75592 4640 aa4.85□□□□□ -1.63
SSR1-210ENST00000489567 hADV29S1A0JD25 119 aa4.85□□□□□ -1.63
SSR1-210ENST00000489567 SFTA2Q6UW10 78 aa4.85□□□□□ -1.63
SSR1-210ENST00000489567 Q8NDZ9 215 aa4.85□□□□□ -1.63
SSR1-210ENST00000489567 C22orf24Q9Y442 160 aa4.85□□□□□ -1.63
SSR1-210ENST00000489567 COX17Q14061 63 aa4.84□□□□□ -1.63
SSR1-210ENST00000489567 MYMXA0A1B0GTQ4 84 aa4.83□□□□□ -1.64
SSR1-210ENST00000489567 LINC00158P58513 81 aa4.83□□□□□ -1.64
SSR1-210ENST00000489567 HERVK_113P61574 105 aa4.83□□□□□ -1.64
SSR1-210ENST00000489567 IGKV2D-26A0A0A0MRZ7 120 aa4.83□□□□□ -1.64
SSR1-210ENST00000489567 K7ERJ3 54 aa4.83□□□□□ -1.64
SSR1-210ENST00000489567 PSMB2P49721 201 aa4.83□□□□□ -1.64
SSR1-210ENST00000489567 SRSF9Q13242 221 aaKnown RBP eCLIP4.83□□□□□ -1.64
SSR1-210ENST00000489567 LINC00643Q86TS7 51 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms