RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.96■□□□□ 0.31
HOXB3-210ENST00000489475 SACSQ9NZJ4 4579 aa16.96■□□□□ 0.31
HOXB3-210ENST00000489475 PRYO14603 147 aa16.95■□□□□ 0.3
HOXB3-210ENST00000489475 KRTAP10-2P60368 255 aa16.95■□□□□ 0.3
HOXB3-210ENST00000489475 C21orf62-AS1Q17RA5 79 aa16.95■□□□□ 0.3
HOXB3-210ENST00000489475 SLC25A20O43772 301 aa16.94■□□□□ 0.3
HOXB3-210ENST00000489475 SNCGO76070 127 aa16.93■□□□□ 0.3
HOXB3-210ENST00000489475 DNAL4O96015 105 aa16.93■□□□□ 0.3
HOXB3-210ENST00000489475 COX7BP24311 80 aa16.93■□□□□ 0.3
HOXB3-210ENST00000489475 HECTD4Q9Y4D8 3996 aa16.93■□□□□ 0.3
HOXB3-210ENST00000489475 A0A1B0GX51 115 aa16.92■□□□□ 0.3
HOXB3-210ENST00000489475 LINC00575Q6W349 94 aa16.92■□□□□ 0.3
HOXB3-210ENST00000489475 SMCPP49901 116 aaPredicted RBP16.91■□□□□ 0.3
HOXB3-210ENST00000489475 ELOF1P60002 83 aaKnown RBP16.91■□□□□ 0.3
HOXB3-210ENST00000489475 PHF5AQ7RTV0 110 aaKnown RBP16.89■□□□□ 0.29
HOXB3-210ENST00000489475 LINC00336Q6ZUF6 198 aa16.88■□□□□ 0.29
HOXB3-210ENST00000489475 ANKRD29Q8N6D5 301 aa16.88■□□□□ 0.29
HOXB3-210ENST00000489475 hADV29S1A0JD25 119 aa16.86■□□□□ 0.29
HOXB3-210ENST00000489475 H3BT86 120 aa16.86■□□□□ 0.29
HOXB3-210ENST00000489475 UBE2BP63146 152 aa16.86■□□□□ 0.29
HOXB3-210ENST00000489475 SPRR1AP35321 89 aa16.86■□□□□ 0.29
HOXB3-210ENST00000489475 REG3GQ6UW15 175 aa16.86■□□□□ 0.29
HOXB3-210ENST00000489475 EPM2AB3EWF7 344 aa16.85■□□□□ 0.29
HOXB3-210ENST00000489475 ETDCA0A1B0GVM5 59 aa16.84■□□□□ 0.29
HOXB3-210ENST00000489475 LINC00528Q8N1L1 170 aa16.84■□□□□ 0.29
HOXB3-210ENST00000489475 KRTAP4-16G5E9R7 235 aaPredicted RBP16.82■□□□□ 0.28
HOXB3-210ENST00000489475 BAALC-AS2P0C853 105 aa16.82■□□□□ 0.28
HOXB3-210ENST00000489475 ETDBQ3ZM63 59 aa16.82■□□□□ 0.28
HOXB3-210ENST00000489475 LINC01600Q96MT4 127 aa16.82■□□□□ 0.28
HOXB3-210ENST00000489475 FAT2Q9NYQ8 4349 aa16.81■□□□□ 0.28
HOXB3-210ENST00000489475 PLAC8Q9NZF1 115 aa16.81■□□□□ 0.28
HOXB3-210ENST00000489475 B5MCH6 92 aa16.8■□□□□ 0.28
HOXB3-210ENST00000489475 ORMDL1Q9P0S3 153 aa16.8■□□□□ 0.28
HOXB3-210ENST00000489475 Q6ZRX8 168 aa16.79■□□□□ 0.28
HOXB3-210ENST00000489475 DNAH11Q96DT5 4516 aa16.79■□□□□ 0.28
HOXB3-210ENST00000489475 INAFM2P0DMQ5 153 aa16.76■□□□□ 0.27
HOXB3-210ENST00000489475 TEN1Q86WV5 123 aa16.76■□□□□ 0.27
HOXB3-210ENST00000489475 KRTAP11-1Q8IUC1 163 aa16.76■□□□□ 0.27
HOXB3-210ENST00000489475 DHRS4-AS1Q9P1J3 65 aa16.75■□□□□ 0.27
HOXB3-210ENST00000489475 Q6ZQY7 126 aa16.74■□□□□ 0.27
HOXB3-210ENST00000489475 KRTAP10-1P60331 282 aa16.73■□□□□ 0.27
HOXB3-210ENST00000489475 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.73■□□□□ 0.27
HOXB3-210ENST00000489475 FAM19A1Q7Z5A9 133 aa16.71■□□□□ 0.27
HOXB3-210ENST00000489475 FAM30AQ9NZY2 134 aa16.71■□□□□ 0.27
HOXB3-210ENST00000489475 PKD1P98161 4303 aa16.71■□□□□ 0.26
HOXB3-210ENST00000489475 K7ERU9 68 aa16.7■□□□□ 0.26
HOXB3-210ENST00000489475 Q9BRP9 147 aa16.7■□□□□ 0.26
HOXB3-210ENST00000489475 KMT2CQ8NEZ4 4911 aaKnown RBP16.69■□□□□ 0.26
HOXB3-210ENST00000489475 TMEM256-PLSCR3K7ERE1 68 aa16.68■□□□□ 0.26
HOXB3-210ENST00000489475 Q6ZSA8 131 aa16.68■□□□□ 0.26
HOXB3-210ENST00000489475 RYR2Q92736 4967 aa16.68■□□□□ 0.26
HOXB3-210ENST00000489475 OCIAD2Q56VL3 154 aa16.68■□□□□ 0.26
HOXB3-210ENST00000489475 DNAH5Q8TE73 4624 aa16.67■□□□□ 0.26
HOXB3-210ENST00000489475 H3BQ85 93 aa16.66■□□□□ 0.26
HOXB3-210ENST00000489475 GHRHP01286 108 aa16.66■□□□□ 0.26
HOXB3-210ENST00000489475 PRLHP81277 87 aa16.66■□□□□ 0.26
HOXB3-210ENST00000489475 PPDPFLQ8WWR9 84 aa16.65■□□□□ 0.26
HOXB3-210ENST00000489475 VPS25Q9BRG1 176 aa16.65■□□□□ 0.26
HOXB3-210ENST00000489475 CIRBP-AS1Q8TBR5 109 aa16.64■□□□□ 0.25
HOXB3-210ENST00000489475 TEX49A0A1B0GTD5 131 aa16.63■□□□□ 0.25
HOXB3-210ENST00000489475 BCE1O60756 84 aa16.63■□□□□ 0.25
HOXB3-210ENST00000489475 A0A1B0GVY2 172 aa16.62■□□□□ 0.25
HOXB3-210ENST00000489475 H0Y9J4 135 aa16.61■□□□□ 0.25
HOXB3-210ENST00000489475 UBE2AP49459 152 aa16.61■□□□□ 0.25
HOXB3-210ENST00000489475 SCXQ7RTU7 201 aa16.61■□□□□ 0.25
HOXB3-210ENST00000489475 SMCR5Q8TEV8 140 aa16.6■□□□□ 0.25
HOXB3-210ENST00000489475 ERC2-IT1O76042 136 aa16.58■□□□□ 0.24
HOXB3-210ENST00000489475 HIGD2AQ9BW72 106 aa16.58■□□□□ 0.24
HOXB3-210ENST00000489475 PSORS1C2Q9UIG4 136 aa16.58■□□□□ 0.24
HOXB3-210ENST00000489475 J3QR89 54 aa16.55■□□□□ 0.24
HOXB3-210ENST00000489475 DEFB105AQ8NG35 78 aa16.55■□□□□ 0.24
HOXB3-210ENST00000489475 LAMTOR3Q9UHA4 124 aa16.54■□□□□ 0.24
HOXB3-210ENST00000489475 ST20-AS1Q8NBB2 130 aa16.53■□□□□ 0.24
HOXB3-210ENST00000489475 DNAH8Q96JB1 4490 aa16.52■□□□□ 0.23
HOXB3-210ENST00000489475 HAMPP81172 84 aa16.52■□□□□ 0.23
HOXB3-210ENST00000489475 C1orf137Q5JT78 98 aa16.52■□□□□ 0.23
HOXB3-210ENST00000489475 KRTAP13-1Q8IUC0 172 aa16.52■□□□□ 0.23
HOXB3-210ENST00000489475 OBSCN-AS1Q96MR7 158 aa16.52■□□□□ 0.23
HOXB3-210ENST00000489475 JMJD7-PLA2G4BH0Y9G9 81 aa16.51■□□□□ 0.23
HOXB3-210ENST00000489475 A0A1B0GV72 72 aa16.49■□□□□ 0.23
HOXB3-210ENST00000489475 Q8N377 158 aa16.49■□□□□ 0.23
HOXB3-210ENST00000489475 IGLV5-48A0A075B6I7 105 aa16.49■□□□□ 0.23
HOXB3-210ENST00000489475 LINC01547P58512 204 aaPredicted RBP16.49■□□□□ 0.23
HOXB3-210ENST00000489475 NDUFV3P56181 108 aaKnown RBP16.46■□□□□ 0.23
HOXB3-210ENST00000489475 PKHD1P08F94 4074 aa16.46■□□□□ 0.23
HOXB3-210ENST00000489475 C14orf132Q9NPU4 83 aa16.45■□□□□ 0.22
HOXB3-210ENST00000489475 SCGB1A1P11684 91 aa16.43■□□□□ 0.22
HOXB3-210ENST00000489475 RBM3P98179 157 aaKnown RBP16.42■□□□□ 0.22
HOXB3-210ENST00000489475 ZNF861PO60384 105 aa16.4■□□□□ 0.22
HOXB3-210ENST00000489475 IGLV7-43P04211 117 aa16.38■□□□□ 0.21
HOXB3-210ENST00000489475 C3orf22Q8N5N4 141 aa16.36■□□□□ 0.21
HOXB3-210ENST00000489475 DSCR8Q96T75 97 aa16.35■□□□□ 0.21
HOXB3-210ENST00000489475 SRRM2Q9UQ35 2752 aaKnown RBP16.34■□□□□ 0.21
HOXB3-210ENST00000489475 GAGE2AQ6NT46 116 aa16.34■□□□□ 0.21
HOXB3-210ENST00000489475 LRP1BQ9NZR2 4599 aa16.33■□□□□ 0.21
HOXB3-210ENST00000489475 RYR3Q15413 4870 aa16.31■□□□□ 0.2
HOXB3-210ENST00000489475 LOC110117498A0A087WWA1 95 aa16.31■□□□□ 0.2
HOXB3-210ENST00000489475 SPRR1BP22528 89 aa16.31■□□□□ 0.2
HOXB3-210ENST00000489475 XGP55808 180 aa16.31■□□□□ 0.2
HOXB3-210ENST00000489475 SMIM29Q86T20 159 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms