RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 XAGE1AQ9HD64 81 aa7.09□□□□□ -1.27
COL21A1-211ENST00000488912 EPM2AB3EWF7 344 aa7.09□□□□□ -1.28
COL21A1-211ENST00000488912 DSCR8Q96T75 97 aa7.09□□□□□ -1.28
COL21A1-211ENST00000488912 CNBPP62633 177 aaKnown RBP7.08□□□□□ -1.28
COL21A1-211ENST00000488912 Q8NDZ9 215 aa7.08□□□□□ -1.28
COL21A1-211ENST00000488912 SACSQ9NZJ4 4579 aa7.08□□□□□ -1.28
COL21A1-211ENST00000488912 IGKV2-28A0A075B6P5 120 aa7.07□□□□□ -1.28
COL21A1-211ENST00000488912 IGKV2D-28P01615 120 aa7.07□□□□□ -1.28
COL21A1-211ENST00000488912 C22orf24Q9Y442 160 aa7.07□□□□□ -1.28
COL21A1-211ENST00000488912 DNAH17Q9UFH2 4485 aa7.06□□□□□ -1.28
COL21A1-211ENST00000488912 A0A087WTM6 91 aa7.06□□□□□ -1.28
COL21A1-211ENST00000488912 TLX1NBP0CAT3 122 aa7.06□□□□□ -1.28
COL21A1-211ENST00000488912 Q8N814 137 aa7.06□□□□□ -1.28
COL21A1-211ENST00000488912 FRAS1Q86XX4 4008 aa7.06□□□□□ -1.28
COL21A1-211ENST00000488912 INAFM2P0DMQ5 153 aa7.06□□□□□ -1.28
COL21A1-211ENST00000488912 PRR3P79522 188 aaKnown RBP7.06□□□□□ -1.28
COL21A1-211ENST00000488912 LINC00337Q8N6G1 96 aa7.06□□□□□ -1.28
COL21A1-211ENST00000488912 Q6JHZ5 121 aa7.05□□□□□ -1.28
COL21A1-211ENST00000488912 NDUFC2O95298 119 aa7.05□□□□□ -1.28
COL21A1-211ENST00000488912 C9orf129Q5T035 196 aaKnown RBP7.05□□□□□ -1.28
COL21A1-211ENST00000488912 NCR3O14931 201 aa7.03□□□□□ -1.28
COL21A1-211ENST00000488912 TRAV13-2A0A0B4J235 113 aa7.02□□□□□ -1.28
COL21A1-211ENST00000488912 LCE6AA0A183 80 aa7.02□□□□□ -1.28
COL21A1-211ENST00000488912 RTL8CO15255 209 aa7.02□□□□□ -1.28
COL21A1-211ENST00000488912 BAALC-AS2P0C853 105 aa7.02□□□□□ -1.28
COL21A1-211ENST00000488912 TNP2Q05952 138 aa7.02□□□□□ -1.29
COL21A1-211ENST00000488912 HECTD4Q9Y4D8 3996 aa7.02□□□□□ -1.29
COL21A1-211ENST00000488912 VPREB1P12018 145 aa7.01□□□□□ -1.29
COL21A1-211ENST00000488912 FUSP35637 526 aaKnown RBP eCLIP7.01□□□□□ -1.29
COL21A1-211ENST00000488912 C9orf163Q8N9P6 203 aa7.01□□□□□ -1.29
COL21A1-211ENST00000488912 A0A096LNI7 61 aa7.01□□□□□ -1.29
COL21A1-211ENST00000488912 LINC00336Q6ZUF6 198 aa7.01□□□□□ -1.29
COL21A1-211ENST00000488912 FAM168BA1KXE4 195 aa7□□□□□ -1.29
COL21A1-211ENST00000488912 SERTAD4-AS1Q5TG53 156 aa7□□□□□ -1.29
COL21A1-211ENST00000488912 IGKV2-24A0A0C4DH68 120 aa6.99□□□□□ -1.29
COL21A1-211ENST00000488912 C16orf90A8MZG2 172 aa6.99□□□□□ -1.29
COL21A1-211ENST00000488912 FAM218AQ96MZ4 157 aa6.99□□□□□ -1.29
COL21A1-211ENST00000488912 SERP1Q9Y6X1 66 aa6.99□□□□□ -1.29
COL21A1-211ENST00000488912 FAT2Q9NYQ8 4349 aa6.99□□□□□ -1.29
COL21A1-211ENST00000488912 KMT2CQ8NEZ4 4911 aaKnown RBP6.98□□□□□ -1.29
COL21A1-211ENST00000488912 CHTF8P0CG12 524 aa6.98□□□□□ -1.29
COL21A1-211ENST00000488912 S100A7L2Q5SY68 101 aa6.98□□□□□ -1.29
COL21A1-211ENST00000488912 KRTAP7-1Q8IUC3 87 aa6.98□□□□□ -1.29
COL21A1-211ENST00000488912 SMIM11BQ8TCY0 68 aa6.98□□□□□ -1.29
COL21A1-211ENST00000488912 OBSCN-AS1Q96MR7 158 aa6.98□□□□□ -1.29
COL21A1-211ENST00000488912 DNAH11Q96DT5 4516 aa6.97□□□□□ -1.29
COL21A1-211ENST00000488912 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
COL21A1-211ENST00000488912 IGLV6-57P01721 117 aa6.96□□□□□ -1.29
COL21A1-211ENST00000488912 RYR2Q92736 4967 aa6.96□□□□□ -1.3
COL21A1-211ENST00000488912 TRBV10-3A0A0K0K1G6 114 aa6.96□□□□□ -1.3
COL21A1-211ENST00000488912 FAM236DA0A1B0GTK5 79 aa6.96□□□□□ -1.3
COL21A1-211ENST00000488912 M0R378 163 aa6.96□□□□□ -1.3
COL21A1-211ENST00000488912 FAM236CP0DP71 79 aa6.96□□□□□ -1.3
COL21A1-211ENST00000488912 RPL28P46779 137 aaKnown RBP6.96□□□□□ -1.3
COL21A1-211ENST00000488912 NKAPP1Q8N9T2 125 aa6.96□□□□□ -1.3
COL21A1-211ENST00000488912 IGLV5-52A0A0A0MRZ9 124 aa6.95□□□□□ -1.3
COL21A1-211ENST00000488912 IGKV3D-7A0A0C4DH55 119 aa6.95□□□□□ -1.3
COL21A1-211ENST00000488912 SEC61GP60059 68 aa6.95□□□□□ -1.3
COL21A1-211ENST00000488912 PKIGQ9Y2B9 76 aa6.95□□□□□ -1.3
COL21A1-211ENST00000488912 IGLV5-37A0A075B6J1 123 aa6.94□□□□□ -1.3
COL21A1-211ENST00000488912 A0A087WVE0 104 aa6.94□□□□□ -1.3
COL21A1-211ENST00000488912 PANO1I0J062 215 aa6.94□□□□□ -1.3
COL21A1-211ENST00000488912 KRTAP10-2P60368 255 aa6.94□□□□□ -1.3
COL21A1-211ENST00000488912 C7orf33Q8WU49 177 aa6.94□□□□□ -1.3
COL21A1-211ENST00000488912 LINC00846Q9NV44 126 aa6.94□□□□□ -1.3
COL21A1-211ENST00000488912 DNAH5Q8TE73 4624 aa6.94□□□□□ -1.3
COL21A1-211ENST00000488912 A0A1W2PNN7 141 aa6.94□□□□□ -1.3
COL21A1-211ENST00000488912 DNAL4O96015 105 aa6.94□□□□□ -1.3
COL21A1-211ENST00000488912 PKD1P98161 4303 aa6.93□□□□□ -1.3
COL21A1-211ENST00000488912 SMIM26A0A096LP01 95 aa6.93□□□□□ -1.3
COL21A1-211ENST00000488912 BCE1O60756 84 aa6.93□□□□□ -1.3
COL21A1-211ENST00000488912 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.93□□□□□ -1.3
COL21A1-211ENST00000488912 TRAV23DV6A0A075B6W5 121 aa6.92□□□□□ -1.3
COL21A1-211ENST00000488912 C6orf99Q4VX62 202 aa6.92□□□□□ -1.3
COL21A1-211ENST00000488912 MRPL55Q7Z7F7 128 aaKnown RBP6.92□□□□□ -1.3
COL21A1-211ENST00000488912 SPACA4Q8TDM5 124 aa6.92□□□□□ -1.3
COL21A1-211ENST00000488912 LINC00474Q9P2X8 69 aa6.92□□□□□ -1.3
COL21A1-211ENST00000488912 V9GYY9 64 aa6.92□□□□□ -1.3
COL21A1-211ENST00000488912 RPL37AP8A6NKH3 93 aa6.91□□□□□ -1.3
COL21A1-211ENST00000488912 GHRHP01286 108 aa6.91□□□□□ -1.3
COL21A1-211ENST00000488912 ATP5EP2Q5VTU8 51 aa6.91□□□□□ -1.3
COL21A1-211ENST00000488912 LINC00167Q96N53 147 aa6.91□□□□□ -1.3
COL21A1-211ENST00000488912 H7BZZ5 65 aa6.9□□□□□ -1.3
COL21A1-211ENST00000488912 FP248Q71RG6 208 aaPredicted RBP6.9□□□□□ -1.31
COL21A1-211ENST00000488912 ZNF73O43830 326 aaPredicted RBP6.89□□□□□ -1.31
COL21A1-211ENST00000488912 IGLV1-50A0A075B6I6 118 aa6.89□□□□□ -1.31
COL21A1-211ENST00000488912 A0A087WYN8 130 aa6.89□□□□□ -1.31
COL21A1-211ENST00000488912 C14orf132Q9NPU4 83 aa6.89□□□□□ -1.31
COL21A1-211ENST00000488912 C1orf195Q5TG92 126 aa6.88□□□□□ -1.31
COL21A1-211ENST00000488912 DIRC1Q969H9 104 aa6.88□□□□□ -1.31
COL21A1-211ENST00000488912 KCNQ1DNQ9H478 68 aa6.88□□□□□ -1.31
COL21A1-211ENST00000488912 H0YGX0 51 aa6.88□□□□□ -1.31
COL21A1-211ENST00000488912 PHF5AQ7RTV0 110 aaKnown RBP6.88□□□□□ -1.31
COL21A1-211ENST00000488912 KLKP1Q107X0 134 aa6.87□□□□□ -1.31
COL21A1-211ENST00000488912 C20orf197Q8N268 126 aa6.87□□□□□ -1.31
COL21A1-211ENST00000488912 DNAH8Q96JB1 4490 aa6.86□□□□□ -1.31
COL21A1-211ENST00000488912 TRAV7A0A075B6U4 112 aa6.86□□□□□ -1.31
COL21A1-211ENST00000488912 CCKP06307 115 aa6.86□□□□□ -1.31
COL21A1-211ENST00000488912 PRYO14603 147 aa6.85□□□□□ -1.31
COL21A1-211ENST00000488912 PKHD1P08F94 4074 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms