RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 S100A7L2Q5SY68 101 aa6.4□□□□□ -1.38
SKA1-204ENST00000488454 LINC00518Q8N0U6 118 aa6.4□□□□□ -1.38
SKA1-204ENST00000488454 Q8NDZ9 215 aa6.4□□□□□ -1.38
SKA1-204ENST00000488454 PPDPFQ9H3Y8 114 aa6.4□□□□□ -1.38
SKA1-204ENST00000488454 HIGD1BQ9P298 99 aa6.4□□□□□ -1.38
SKA1-204ENST00000488454 FAT1Q14517 4588 aa6.4□□□□□ -1.39
SKA1-204ENST00000488454 IGKV2-28A0A075B6P5 120 aa6.39□□□□□ -1.39
SKA1-204ENST00000488454 IGKV2D-28P01615 120 aa6.39□□□□□ -1.39
SKA1-204ENST00000488454 C1orf137Q5JT78 98 aa6.39□□□□□ -1.39
SKA1-204ENST00000488454 UQCR10Q9UDW1 63 aa6.39□□□□□ -1.39
SKA1-204ENST00000488454 PSORS1C2Q9UIG4 136 aa6.39□□□□□ -1.39
SKA1-204ENST00000488454 IGLV1-50A0A075B6I6 118 aa6.38□□□□□ -1.39
SKA1-204ENST00000488454 OR13C6PQ8NH95 151 aa6.38□□□□□ -1.39
SKA1-204ENST00000488454 CBY1Q9Y3M2 126 aa6.38□□□□□ -1.39
SKA1-204ENST00000488454 DDTP30046 118 aa6.37□□□□□ -1.39
SKA1-204ENST00000488454 TAL2Q16559 108 aa6.36□□□□□ -1.39
SKA1-204ENST00000488454 REG3GQ6UW15 175 aa6.36□□□□□ -1.39
SKA1-204ENST00000488454 C2orf91Q6ZV80 131 aa6.36□□□□□ -1.39
SKA1-204ENST00000488454 KRTAP11-1Q8IUC1 163 aa6.36□□□□□ -1.39
SKA1-204ENST00000488454 C12orf57Q99622 126 aa6.36□□□□□ -1.39
SKA1-204ENST00000488454 TMEM126AQ9H061 195 aa6.36□□□□□ -1.39
SKA1-204ENST00000488454 PRO1933Q9H354 126 aa6.36□□□□□ -1.39
SKA1-204ENST00000488454 TRAV13-2A0A0B4J235 113 aa6.35□□□□□ -1.39
SKA1-204ENST00000488454 TRBV10-3A0A0K0K1G6 114 aa6.35□□□□□ -1.39
SKA1-204ENST00000488454 A6NDN8 102 aa6.35□□□□□ -1.39
SKA1-204ENST00000488454 HNRNPA3P51991 378 aaKnown RBP6.35□□□□□ -1.39
SKA1-204ENST00000488454 A4D1N5 150 aa6.34□□□□□ -1.39
SKA1-204ENST00000488454 PRYO14603 147 aa6.34□□□□□ -1.39
SKA1-204ENST00000488454 BCE1O60756 84 aa6.34□□□□□ -1.39
SKA1-204ENST00000488454 IGLV6-57P01721 117 aa6.34□□□□□ -1.39
SKA1-204ENST00000488454 IGLV7-43P04211 117 aa6.34□□□□□ -1.39
SKA1-204ENST00000488454 KCNQ1DNQ9H478 68 aa6.34□□□□□ -1.39
SKA1-204ENST00000488454 TSTD3H0UI37 97 aa6.33□□□□□ -1.4
SKA1-204ENST00000488454 UBE2AP49459 152 aa6.33□□□□□ -1.4
SKA1-204ENST00000488454 HINT1P49773 126 aaPredicted RBP6.33□□□□□ -1.4
SKA1-204ENST00000488454 FAM19A1Q7Z5A9 133 aa6.33□□□□□ -1.4
SKA1-204ENST00000488454 CEND1Q8N111 149 aa6.33□□□□□ -1.4
SKA1-204ENST00000488454 TRAV23DV6A0A075B6W5 121 aa6.32□□□□□ -1.4
SKA1-204ENST00000488454 ETDCA0A1B0GVM5 59 aa6.32□□□□□ -1.4
SKA1-204ENST00000488454 INAFM2P0DMQ5 153 aa6.32□□□□□ -1.4
SKA1-204ENST00000488454 RPL28P46779 137 aaKnown RBP6.32□□□□□ -1.4
SKA1-204ENST00000488454 HSD52Q0P140 79 aa6.32□□□□□ -1.4
SKA1-204ENST00000488454 VPS13BQ7Z7G8 4022 aa6.31□□□□□ -1.4
SKA1-204ENST00000488454 ZNF861PO60384 105 aa6.31□□□□□ -1.4
SKA1-204ENST00000488454 KRTAP10-4P60372 401 aaPredicted RBP6.31□□□□□ -1.4
SKA1-204ENST00000488454 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
SKA1-204ENST00000488454 LINC00337Q8N6G1 96 aa6.31□□□□□ -1.4
SKA1-204ENST00000488454 RAB37Q96AX2 223 aa6.31□□□□□ -1.4
SKA1-204ENST00000488454 DIRC1Q969H9 104 aa6.3□□□□□ -1.4
SKA1-204ENST00000488454 ZNF73O43830 326 aaPredicted RBP6.29□□□□□ -1.4
SKA1-204ENST00000488454 SPRR1AP35321 89 aa6.29□□□□□ -1.4
SKA1-204ENST00000488454 CFC1BP0CG36 223 aa6.28□□□□□ -1.4
SKA1-204ENST00000488454 CFC1P0CG37 223 aa6.28□□□□□ -1.4
SKA1-204ENST00000488454 PRLHP81277 87 aa6.28□□□□□ -1.4
SKA1-204ENST00000488454 ABCA13Q86UQ4 5058 aa6.27□□□□□ -1.41
SKA1-204ENST00000488454 A0A0B4J2C4 111 aa6.27□□□□□ -1.41
SKA1-204ENST00000488454 H0Y9J4 135 aa6.27□□□□□ -1.41
SKA1-204ENST00000488454 RPL13AP40429 203 aaKnown RBP6.27□□□□□ -1.41
SKA1-204ENST00000488454 FXYD2P54710 66 aa6.27□□□□□ -1.41
SKA1-204ENST00000488454 CTAG1AP78358 180 aa6.27□□□□□ -1.41
SKA1-204ENST00000488454 VAMP3Q15836 100 aa6.27□□□□□ -1.41
SKA1-204ENST00000488454 C6orf99Q4VX62 202 aa6.27□□□□□ -1.41
SKA1-204ENST00000488454 B5MCH6 92 aa6.26□□□□□ -1.41
SKA1-204ENST00000488454 KRTAP4-16G5E9R7 235 aaPredicted RBP6.26□□□□□ -1.41
SKA1-204ENST00000488454 H7C2G1 150 aa6.26□□□□□ -1.41
SKA1-204ENST00000488454 M0R143 59 aa6.26□□□□□ -1.41
SKA1-204ENST00000488454 SMIM11BQ8TCY0 68 aa6.26□□□□□ -1.41
SKA1-204ENST00000488454 HIGD2AQ9BW72 106 aa6.26□□□□□ -1.41
SKA1-204ENST00000488454 NHP2Q9NX24 153 aaKnown RBP6.26□□□□□ -1.41
SKA1-204ENST00000488454 PRO1854Q9UHT4 67 aa6.26□□□□□ -1.41
SKA1-204ENST00000488454 COX7BP24311 80 aa6.25□□□□□ -1.41
SKA1-204ENST00000488454 BVES-AS1Q5T3Y7 98 aa6.25□□□□□ -1.41
SKA1-204ENST00000488454 KRTAP13-1Q8IUC0 172 aa6.25□□□□□ -1.41
SKA1-204ENST00000488454 SRRM2Q9UQ35 2752 aaKnown RBP6.24□□□□□ -1.41
SKA1-204ENST00000488454 HERC1Q15751 4861 aa6.24□□□□□ -1.41
SKA1-204ENST00000488454 TRBV7-6A0A0J9YX20 115 aa6.24□□□□□ -1.41
SKA1-204ENST00000488454 Q1RN00 199 aa6.24□□□□□ -1.41
SKA1-204ENST00000488454 Q6ZRX8 168 aa6.24□□□□□ -1.41
SKA1-204ENST00000488454 A0A1B0GWB2 263 aa6.23□□□□□ -1.41
SKA1-204ENST00000488454 SMCR5Q8TEV8 140 aa6.23□□□□□ -1.41
SKA1-204ENST00000488454 DHRS4-AS1Q9P1J3 65 aa6.23□□□□□ -1.41
SKA1-204ENST00000488454 ELOF1P60002 83 aaKnown RBP6.22□□□□□ -1.41
SKA1-204ENST00000488454 ZNF706Q9Y5V0 76 aaPredicted RBP6.22□□□□□ -1.41
SKA1-204ENST00000488454 SLC25A20O43772 301 aa6.21□□□□□ -1.42
SKA1-204ENST00000488454 K7ERJ3 54 aa6.2□□□□□ -1.42
SKA1-204ENST00000488454 SNCGO76070 127 aa6.2□□□□□ -1.42
SKA1-204ENST00000488454 OXTP01178 125 aa6.2□□□□□ -1.42
SKA1-204ENST00000488454 PSMB2P49721 201 aa6.2□□□□□ -1.42
SKA1-204ENST00000488454 Q9BRP9 147 aa6.2□□□□□ -1.42
SKA1-204ENST00000488454 BATFQ16520 125 aa6.19□□□□□ -1.42
SKA1-204ENST00000488454 H0YGX0 51 aa6.18□□□□□ -1.42
SKA1-204ENST00000488454 ERC2-IT1O76042 136 aa6.18□□□□□ -1.42
SKA1-204ENST00000488454 COX6CP09669 75 aa6.18□□□□□ -1.42
SKA1-204ENST00000488454 LINC00575Q6W349 94 aa6.17□□□□□ -1.42
SKA1-204ENST00000488454 LINC01600Q96MT4 127 aa6.17□□□□□ -1.42
SKA1-204ENST00000488454 SPRR4Q96PI1 79 aa6.17□□□□□ -1.42
SKA1-204ENST00000488454 PKHD1L1Q86WI1 4243 aa6.17□□□□□ -1.42
SKA1-204ENST00000488454 hADV29S1A0JD25 119 aa6.16□□□□□ -1.42
SKA1-204ENST00000488454 KRTAP29-1A8MX34 341 aaPredicted RBP6.16□□□□□ -1.42
SKA1-204ENST00000488454 SCGB1C2P0DMR2 95 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms