RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 IGKCP01834 107 aa8.71□□□□□ -1.02
TOM1-214ENST00000487670 C3orf79P0CE67 100 aa8.71□□□□□ -1.02
TOM1-214ENST00000487670 RPL24P83731 157 aaKnown RBP8.71□□□□□ -1.02
TOM1-214ENST00000487670 LINC01545Q5VT33 79 aa8.7□□□□□ -1.02
TOM1-214ENST00000487670 COX6B2Q6YFQ2 88 aa8.7□□□□□ -1.02
TOM1-214ENST00000487670 MACF1Q9UPN3 7388 aaKnown RBP8.7□□□□□ -1.02
TOM1-214ENST00000487670 KRTDAPP60985 99 aa8.68□□□□□ -1.02
TOM1-214ENST00000487670 PET117Q6UWS5 81 aa8.68□□□□□ -1.02
TOM1-214ENST00000487670 HIST3H2BBQ8N257 126 aa8.68□□□□□ -1.02
TOM1-214ENST00000487670 LEPROTO15243 131 aa8.67□□□□□ -1.02
TOM1-214ENST00000487670 SPRR1AP35321 89 aa8.67□□□□□ -1.02
TOM1-214ENST00000487670 SYNE2Q8WXH0 6885 aaKnown RBP8.66□□□□□ -1.02
TOM1-214ENST00000487670 SSBP3-AS1Q7Z2R9 100 aa8.66□□□□□ -1.02
TOM1-214ENST00000487670 A0A0U1RRA0 63 aa8.65□□□□□ -1.02
TOM1-214ENST00000487670 J3QQQ9 107 aa8.65□□□□□ -1.02
TOM1-214ENST00000487670 PRYO14603 147 aa8.65□□□□□ -1.02
TOM1-214ENST00000487670 SFTA2Q6UW10 78 aa8.65□□□□□ -1.02
TOM1-214ENST00000487670 KRTAP19-1Q8IUB9 90 aa8.65□□□□□ -1.02
TOM1-214ENST00000487670 HIST1H2BLQ99880 126 aa8.65□□□□□ -1.02
TOM1-214ENST00000487670 NCR3O14931 201 aa8.64□□□□□ -1.03
TOM1-214ENST00000487670 SMIM13P0DJ93 91 aa8.64□□□□□ -1.03
TOM1-214ENST00000487670 HERVK_113P61574 105 aa8.64□□□□□ -1.03
TOM1-214ENST00000487670 LINC00158P58513 81 aa8.63□□□□□ -1.03
TOM1-214ENST00000487670 COX17Q14061 63 aa8.63□□□□□ -1.03
TOM1-214ENST00000487670 KRTAP9-8Q9BYQ0 159 aa8.63□□□□□ -1.03
TOM1-214ENST00000487670 MYMXA0A1B0GTQ4 84 aa8.62□□□□□ -1.03
TOM1-214ENST00000487670 E9PLD3 99 aa8.62□□□□□ -1.03
TOM1-214ENST00000487670 Q9BRP9 147 aa8.62□□□□□ -1.03
TOM1-214ENST00000487670 ETDCA0A1B0GVM5 59 aa8.61□□□□□ -1.03
TOM1-214ENST00000487670 SNRPEP62304 92 aaKnown RBP8.61□□□□□ -1.03
TOM1-214ENST00000487670 HERV-K104P63124 156 aa8.61□□□□□ -1.03
TOM1-214ENST00000487670 MEIG1Q5JSS6 88 aa8.61□□□□□ -1.03
TOM1-214ENST00000487670 ATOH7Q8N100 152 aa8.61□□□□□ -1.03
TOM1-214ENST00000487670 S100A6P06703 90 aa8.6□□□□□ -1.03
TOM1-214ENST00000487670 LGALS3P17931 250 aaKnown RBP8.6□□□□□ -1.03
TOM1-214ENST00000487670 S100A2P29034 98 aa8.6□□□□□ -1.03
TOM1-214ENST00000487670 C9orf153Q5TBE3 101 aa8.6□□□□□ -1.03
TOM1-214ENST00000487670 MIR7-3HGQ8N6C7 128 aa8.6□□□□□ -1.03
TOM1-214ENST00000487670 KCNQ1DNQ9H478 68 aa8.6□□□□□ -1.03
TOM1-214ENST00000487670 B5MCH6 92 aa8.59□□□□□ -1.03
TOM1-214ENST00000487670 TTTY13Q9BZ97 58 aa8.59□□□□□ -1.03
TOM1-214ENST00000487670 TRBV10-3A0A0K0K1G6 114 aa8.58□□□□□ -1.04
TOM1-214ENST00000487670 C20orf202A1L168 122 aa8.58□□□□□ -1.04
TOM1-214ENST00000487670 C5orf52A6NGY3 159 aa8.58□□□□□ -1.04
TOM1-214ENST00000487670 IGLV6-57P01721 117 aa8.58□□□□□ -1.04
TOM1-214ENST00000487670 NMUP48645 174 aa8.58□□□□□ -1.04
TOM1-214ENST00000487670 ANKRD39Q53RE8 183 aa8.58□□□□□ -1.04
TOM1-214ENST00000487670 HRCT1Q6UXD1 115 aa8.58□□□□□ -1.04
TOM1-214ENST00000487670 A0A0J9YXY3 114 aa8.56□□□□□ -1.04
TOM1-214ENST00000487670 LCE2BO14633 110 aa8.55□□□□□ -1.04
TOM1-214ENST00000487670 ADAMTSL4-AS1Q5T5F5 129 aa8.55□□□□□ -1.04
TOM1-214ENST00000487670 EIF4EBP3O60516 100 aaPredicted RBP8.54□□□□□ -1.04
TOM1-214ENST00000487670 RPL37P61927 97 aaKnown RBP8.54□□□□□ -1.04
TOM1-214ENST00000487670 BOD1L2Q8IYS8 172 aa8.54□□□□□ -1.04
TOM1-214ENST00000487670 LINC00587B1AMM8 73 aa8.53□□□□□ -1.04
TOM1-214ENST00000487670 SOSTDC1Q6X4U4 206 aa8.53□□□□□ -1.04
TOM1-214ENST00000487670 ST20-AS1Q8NBB2 130 aa8.53□□□□□ -1.04
TOM1-214ENST00000487670 LITAFQ99732 161 aa8.53□□□□□ -1.04
TOM1-214ENST00000487670 ZNF815PA8K554 130 aa8.52□□□□□ -1.05
TOM1-214ENST00000487670 LOC107984156A0A0G2JMH3 177 aa8.5□□□□□ -1.05
TOM1-214ENST00000487670 NPC2P61916 151 aa8.5□□□□□ -1.05
TOM1-214ENST00000487670 Q6Q795 121 aa8.5□□□□□ -1.05
TOM1-214ENST00000487670 PCP2Q8IVA1 136 aa8.5□□□□□ -1.05
TOM1-214ENST00000487670 ARL17AQ8IVW1 177 aa8.5□□□□□ -1.05
TOM1-214ENST00000487670 CFC1P0CG37 223 aa8.49□□□□□ -1.05
TOM1-214ENST00000487670 Q6ZRX8 168 aa8.48□□□□□ -1.05
TOM1-214ENST00000487670 TIMM17BO60830 172 aa8.47□□□□□ -1.05
TOM1-214ENST00000487670 AKR1D1P51857 326 aa8.47□□□□□ -1.05
TOM1-214ENST00000487670 TMA7Q9Y2S6 64 aaKnown RBP8.47□□□□□ -1.05
TOM1-214ENST00000487670 SCGB1D1O95968 90 aa8.46□□□□□ -1.06
TOM1-214ENST00000487670 LINC00308Q8TCZ7 52 aa8.45□□□□□ -1.06
TOM1-214ENST00000487670 MIEN1Q9BRT3 115 aa8.45□□□□□ -1.06
TOM1-214ENST00000487670 LIMD2Q9BT23 127 aa8.45□□□□□ -1.06
TOM1-214ENST00000487670 MT2AP02795 61 aa8.44□□□□□ -1.06
TOM1-214ENST00000487670 H7C2G1 150 aa8.43□□□□□ -1.06
TOM1-214ENST00000487670 SCGB1D4Q6XE38 83 aa8.43□□□□□ -1.06
TOM1-214ENST00000487670 SPANXB1Q9NS25 103 aaPredicted RBP8.43□□□□□ -1.06
TOM1-214ENST00000487670 NDUFC2O95298 119 aa8.42□□□□□ -1.06
TOM1-214ENST00000487670 TRBV10-2A0A0K0K1G8 114 aa8.41□□□□□ -1.06
TOM1-214ENST00000487670 HSBP1L1C9JCN9 74 aa8.41□□□□□ -1.06
TOM1-214ENST00000487670 DDTP30046 118 aa8.41□□□□□ -1.06
TOM1-214ENST00000487670 SPANXDQ9BXN6 97 aa8.41□□□□□ -1.06
TOM1-214ENST00000487670 SPANXCQ9NY87 97 aa8.41□□□□□ -1.06
TOM1-214ENST00000487670 MT1FP04733 61 aa8.4□□□□□ -1.06
TOM1-214ENST00000487670 C1orf195Q5TG92 126 aa8.39□□□□□ -1.07
TOM1-214ENST00000487670 JOSD1Q15040 202 aaPredicted RBP8.38□□□□□ -1.07
TOM1-214ENST00000487670 KRTAP9-3Q9BYQ3 159 aa8.37□□□□□ -1.07
TOM1-214ENST00000487670 A0A0G2JQZ4 141 aa8.36□□□□□ -1.07
TOM1-214ENST00000487670 S100A7L2Q5SY68 101 aa8.36□□□□□ -1.07
TOM1-214ENST00000487670 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
TOM1-214ENST00000487670 PAM16Q9Y3D7 125 aa8.36□□□□□ -1.07
TOM1-214ENST00000487670 COX8AP10176 69 aa8.35□□□□□ -1.07
TOM1-214ENST00000487670 PYY3Q5JQD4 70 aa8.35□□□□□ -1.07
TOM1-214ENST00000487670 IFITM1P13164 125 aa8.34□□□□□ -1.07
TOM1-214ENST00000487670 SPATA45Q537H7 98 aa8.34□□□□□ -1.07
TOM1-214ENST00000487670 TRAV23DV6A0A075B6W5 121 aa8.33□□□□□ -1.08
TOM1-214ENST00000487670 SPRR1BP22528 89 aa8.33□□□□□ -1.08
TOM1-214ENST00000487670 Q6ZVH6 145 aa8.33□□□□□ -1.08
TOM1-214ENST00000487670 C14orf144Q96I85 54 aa8.33□□□□□ -1.08
TOM1-214ENST00000487670 VAMP8Q9BV40 100 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms