RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 AMN1Q8IY45 258 aa1.91□□□□□ -2.1
CNN3-206ENST00000487539 SND1-IT1Q9HBX3 110 aa1.91□□□□□ -2.1
CNN3-206ENST00000487539 CDKN2A-AS1Q9UH64 79 aa1.91□□□□□ -2.1
CNN3-206ENST00000487539 TRBV20OR9-2A0A075B6H5 130 aa1.9□□□□□ -2.11
CNN3-206ENST00000487539 LOC107984156A0A0G2JMH3 177 aa1.9□□□□□ -2.11
CNN3-206ENST00000487539 MAP1LC3B2A6NCE7 125 aa1.9□□□□□ -2.11
CNN3-206ENST00000487539 TCAPO15273 167 aa1.9□□□□□ -2.11
CNN3-206ENST00000487539 ARPC5O15511 151 aa1.9□□□□□ -2.11
CNN3-206ENST00000487539 MBP02144 154 aa1.9□□□□□ -2.11
CNN3-206ENST00000487539 S100A9P06702 114 aaKnown RBP1.9□□□□□ -2.11
CNN3-206ENST00000487539 SERF2P84101 59 aa1.9□□□□□ -2.11
CNN3-206ENST00000487539 ARL17AQ8IVW1 177 aa1.9□□□□□ -2.11
CNN3-206ENST00000487539 MAP1LC3BQ9GZQ8 125 aa1.9□□□□□ -2.11
CNN3-206ENST00000487539 SPANXA1Q9NS26 97 aa1.9□□□□□ -2.11
CNN3-206ENST00000487539 A8MWP4 228 aa1.89□□□□□ -2.11
CNN3-206ENST00000487539 SMAGPQ0VAQ4 97 aa1.89□□□□□ -2.11
CNN3-206ENST00000487539 C6orf99Q4VX62 202 aa1.89□□□□□ -2.11
CNN3-206ENST00000487539 RPL7L1Q6DKI1 246 aaKnown RBP1.89□□□□□ -2.11
CNN3-206ENST00000487539 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
CNN3-206ENST00000487539 TCEAL7Q9BRU2 100 aa1.89□□□□□ -2.11
CNN3-206ENST00000487539 ETDCA0A1B0GVM5 59 aa1.88□□□□□ -2.11
CNN3-206ENST00000487539 XKRY2A2RUG3 117 aa1.88□□□□□ -2.11
CNN3-206ENST00000487539 COLCA2A8K830 154 aa1.88□□□□□ -2.11
CNN3-206ENST00000487539 TEX46H3BTG2 121 aa1.88□□□□□ -2.11
CNN3-206ENST00000487539 ATP5LO75964 103 aa1.88□□□□□ -2.11
CNN3-206ENST00000487539 SMIM15Q7Z3B0 74 aa1.88□□□□□ -2.11
CNN3-206ENST00000487539 COX7B2Q8TF08 81 aa1.88□□□□□ -2.11
CNN3-206ENST00000487539 EIF5A2Q9GZV4 153 aaKnown RBP1.88□□□□□ -2.11
CNN3-206ENST00000487539 TMEM191AQ9H0A3 160 aa1.88□□□□□ -2.11
CNN3-206ENST00000487539 K7EN84 100 aa1.87□□□□□ -2.11
CNN3-206ENST00000487539 MT4P47944 62 aa1.87□□□□□ -2.11
CNN3-206ENST00000487539 CCL20P78556 96 aa1.87□□□□□ -2.11
CNN3-206ENST00000487539 KRTAP19-8Q3LI54 63 aa1.87□□□□□ -2.11
CNN3-206ENST00000487539 Q5VV11 94 aa1.87□□□□□ -2.11
CNN3-206ENST00000487539 TMEM141Q96I45 108 aa1.87□□□□□ -2.11
CNN3-206ENST00000487539 AMELXQ99217 191 aa1.87□□□□□ -2.11
CNN3-206ENST00000487539 KCNQ1DNQ9H478 68 aa1.87□□□□□ -2.11
CNN3-206ENST00000487539 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
CNN3-206ENST00000487539 TRBV10-3A0A0K0K1G6 114 aa1.86□□□□□ -2.11
CNN3-206ENST00000487539 NCR3O14931 201 aa1.86□□□□□ -2.11
CNN3-206ENST00000487539 PPP1R2P9O14990 202 aa1.86□□□□□ -2.11
CNN3-206ENST00000487539 SPINK8P0C7L1 97 aa1.86□□□□□ -2.11
CNN3-206ENST00000487539 PET100P0DJ07 73 aa1.86□□□□□ -2.11
CNN3-206ENST00000487539 TAGLN2P37802 199 aaKnown RBP1.86□□□□□ -2.11
CNN3-206ENST00000487539 COX19Q49B96 90 aa1.86□□□□□ -2.11
CNN3-206ENST00000487539 MRPL51Q4U2R6 128 aaKnown RBP1.86□□□□□ -2.11
CNN3-206ENST00000487539 C10orf91Q5T1B1 145 aa1.86□□□□□ -2.11
CNN3-206ENST00000487539 Q5W150 140 aa1.86□□□□□ -2.11
CNN3-206ENST00000487539 Q5XG85 94 aa1.86□□□□□ -2.11
CNN3-206ENST00000487539 TEX43Q6ZNM6 134 aa1.86□□□□□ -2.11
CNN3-206ENST00000487539 FAM213BQ8TBF2 198 aa1.86□□□□□ -2.11
CNN3-206ENST00000487539 ZNF625Q96I27 306 aaPredicted RBP1.86□□□□□ -2.11
CNN3-206ENST00000487539 Q96NJ1 140 aa1.86□□□□□ -2.11
CNN3-206ENST00000487539 BORCS7-ASMTA0A0B4J1R7 106 aa1.85□□□□□ -2.11
CNN3-206ENST00000487539 LOC389332A0A1B0GUA5 103 aa1.85□□□□□ -2.11
CNN3-206ENST00000487539 KANTRA0A1W2PQU2 76 aa1.85□□□□□ -2.11
CNN3-206ENST00000487539 PFDN1O60925 122 aa1.85□□□□□ -2.11
CNN3-206ENST00000487539 GNG4P50150 75 aa1.85□□□□□ -2.11
CNN3-206ENST00000487539 AKR1C8PQ5T2L2 129 aa1.85□□□□□ -2.11
CNN3-206ENST00000487539 ALKAL2Q6UX46 152 aa1.85□□□□□ -2.11
CNN3-206ENST00000487539 TCTE3Q8IZS6 198 aa1.85□□□□□ -2.11
CNN3-206ENST00000487539 KCNRGQ8N5I3 272 aa1.85□□□□□ -2.11
CNN3-206ENST00000487539 SFT2D1Q8WV19 159 aa1.85□□□□□ -2.11
CNN3-206ENST00000487539 RBM12B-AS1Q9P1G2 102 aa1.85□□□□□ -2.11
CNN3-206ENST00000487539 TRAV9-1A0A075B6T8 112 aa1.84□□□□□ -2.11
CNN3-206ENST00000487539 A8MUU9 505 aa1.84□□□□□ -2.11
CNN3-206ENST00000487539 NPYP01303 97 aa1.84□□□□□ -2.11
CNN3-206ENST00000487539 IFI27P40305 119 aaPredicted RBP1.84□□□□□ -2.11
CNN3-206ENST00000487539 MBD3L1Q8WWY6 194 aa1.84□□□□□ -2.11
CNN3-206ENST00000487539 SMIM2Q9BVW6 85 aa1.84□□□□□ -2.11
CNN3-206ENST00000487539 VCX2Q9H322 139 aa1.84□□□□□ -2.11
CNN3-206ENST00000487539 GNG13Q9P2W3 67 aa1.84□□□□□ -2.11
CNN3-206ENST00000487539 ERG28Q9UKR5 140 aa1.84□□□□□ -2.11
CNN3-206ENST00000487539 TRBV24-1A0A075B6N3 115 aa1.83□□□□□ -2.12
CNN3-206ENST00000487539 HMSDA8MTL9 139 aa1.83□□□□□ -2.12
CNN3-206ENST00000487539 C9JQL5 133 aa1.83□□□□□ -2.12
CNN3-206ENST00000487539 CEBPGP53567 150 aa1.83□□□□□ -2.12
CNN3-206ENST00000487539 CD164Q04900 197 aa1.83□□□□□ -2.12
CNN3-206ENST00000487539 ZNF345Q14585 488 aa1.83□□□□□ -2.12
CNN3-206ENST00000487539 PDZD11Q5EBL8 140 aa1.83□□□□□ -2.12
CNN3-206ENST00000487539 Q6ZRX8 168 aa1.83□□□□□ -2.12
CNN3-206ENST00000487539 C20orf78Q9BR46 151 aa1.83□□□□□ -2.12
CNN3-206ENST00000487539 A0A1B0GUT8 65 aa1.82□□□□□ -2.12
CNN3-206ENST00000487539 A0A1B0GVX0 72 aa1.82□□□□□ -2.12
CNN3-206ENST00000487539 IGIPA6NJ69 53 aa1.82□□□□□ -2.12
CNN3-206ENST00000487539 GATCO43716 136 aaKnown RBP1.82□□□□□ -2.12
CNN3-206ENST00000487539 SPRR1BP22528 89 aa1.82□□□□□ -2.12
CNN3-206ENST00000487539 HERVK_113P63121 156 aa1.82□□□□□ -2.12
CNN3-206ENST00000487539 FAM104BQ5XKR9 115 aa1.82□□□□□ -2.12
CNN3-206ENST00000487539 SLC51BQ86UW2 128 aa1.82□□□□□ -2.12
CNN3-206ENST00000487539 C2orf88Q9BSF0 95 aa1.82□□□□□ -2.12
CNN3-206ENST00000487539 HIGD1CA8MV81 97 aa1.81□□□□□ -2.12
CNN3-206ENST00000487539 D6R8Y8 96 aa1.81□□□□□ -2.12
CNN3-206ENST00000487539 IGKV4-1P06312 121 aa1.81□□□□□ -2.12
CNN3-206ENST00000487539 IFITM2Q01629 132 aa1.81□□□□□ -2.12
CNN3-206ENST00000487539 UMAD1C9J7I0 102 aa1.8□□□□□ -2.12
CNN3-206ENST00000487539 PPP1R17O96001 155 aa1.8□□□□□ -2.12
CNN3-206ENST00000487539 CKS2P33552 79 aa1.8□□□□□ -2.12
CNN3-206ENST00000487539 BOD1L2Q8IYS8 172 aa1.8□□□□□ -2.12
CNN3-206ENST00000487539 SMIM12Q96EX1 92 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms