RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 FAM168BA1KXE4 195 aa13.12□□□□□ -0.31
HPS3-206ENST00000486530 FBN3Q75N90 2809 aa13.12□□□□□ -0.31
HPS3-206ENST00000486530 LAMTOR3Q9UHA4 124 aa13.11□□□□□ -0.31
HPS3-206ENST00000486530 TRBV7-7A0A0K0K1E9 115 aa13.1□□□□□ -0.31
HPS3-206ENST00000486530 NBDYA0A0U1RRE5 68 aa13.1□□□□□ -0.31
HPS3-206ENST00000486530 PRYO14603 147 aa13.1□□□□□ -0.31
HPS3-206ENST00000486530 RBM3P98179 157 aaKnown RBP13.09□□□□□ -0.31
HPS3-206ENST00000486530 IGLV1-50A0A075B6I6 118 aa13.08□□□□□ -0.32
HPS3-206ENST00000486530 KRTAP7-1Q8IUC3 87 aa13.08□□□□□ -0.32
HPS3-206ENST00000486530 FAM19A5Q7Z5A7 132 aaPredicted RBP13.06□□□□□ -0.32
HPS3-206ENST00000486530 MRPL55Q7Z7F7 128 aaKnown RBP13.06□□□□□ -0.32
HPS3-206ENST00000486530 STARD9Q9P2P6 4700 aa13.06□□□□□ -0.32
HPS3-206ENST00000486530 LOC110117498A0A087WWA1 95 aa13.06□□□□□ -0.32
HPS3-206ENST00000486530 IMUPQ9GZP8 106 aa13.06□□□□□ -0.32
HPS3-206ENST00000486530 LINC00846Q9NV44 126 aa13.06□□□□□ -0.32
HPS3-206ENST00000486530 RPL37AP8A6NKH3 93 aa13.05□□□□□ -0.32
HPS3-206ENST00000486530 C16orf90A8MZG2 172 aa13.05□□□□□ -0.32
HPS3-206ENST00000486530 SPRR1AP35321 89 aa13.04□□□□□ -0.32
HPS3-206ENST00000486530 TENM2Q9NT68 2774 aa13.03□□□□□ -0.32
HPS3-206ENST00000486530 DNAH10Q8IVF4 4471 aa13.03□□□□□ -0.32
HPS3-206ENST00000486530 Q6ZQT0 140 aa13.03□□□□□ -0.32
HPS3-206ENST00000486530 A0A096LNI7 61 aa13.02□□□□□ -0.32
HPS3-206ENST00000486530 KRTAP4-16G5E9R7 235 aaPredicted RBP13.02□□□□□ -0.32
HPS3-206ENST00000486530 PDE6GP18545 87 aa13.02□□□□□ -0.33
HPS3-206ENST00000486530 Q6ZRX8 168 aa13.02□□□□□ -0.33
HPS3-206ENST00000486530 DSCR8Q96T75 97 aa13.02□□□□□ -0.33
HPS3-206ENST00000486530 DHRS4-AS1Q9P1J3 65 aa13.01□□□□□ -0.33
HPS3-206ENST00000486530 VPS13DQ5THJ4 4388 aa13□□□□□ -0.33
HPS3-206ENST00000486530 IGLV2-33A0A075B6J2 118 aaPredicted RBP13□□□□□ -0.33
HPS3-206ENST00000486530 ETDCA0A1B0GVM5 59 aa13□□□□□ -0.33
HPS3-206ENST00000486530 B5MCH6 92 aa13□□□□□ -0.33
HPS3-206ENST00000486530 LRCOL1A6NCL2 159 aa12.99□□□□□ -0.33
HPS3-206ENST00000486530 Q6ZRN7 208 aaPredicted RBP12.99□□□□□ -0.33
HPS3-206ENST00000486530 IGKV2-24A0A0C4DH68 120 aa12.98□□□□□ -0.33
HPS3-206ENST00000486530 NDUFV3P56181 108 aaKnown RBP12.98□□□□□ -0.33
HPS3-206ENST00000486530 Q6JHZ5 121 aa12.98□□□□□ -0.33
HPS3-206ENST00000486530 PKIGQ9Y2B9 76 aa12.98□□□□□ -0.33
HPS3-206ENST00000486530 WWC2-AS2Q96NR7 200 aa12.97□□□□□ -0.33
HPS3-206ENST00000486530 TRBV7-4A0A0J9YYF1 115 aa12.95□□□□□ -0.34
HPS3-206ENST00000486530 ANAPC13Q9BS18 74 aa12.95□□□□□ -0.34
HPS3-206ENST00000486530 TGP01266 2768 aa12.95□□□□□ -0.34
HPS3-206ENST00000486530 REG3GQ6UW15 175 aa12.95□□□□□ -0.34
HPS3-206ENST00000486530 Q9BRP9 147 aa12.95□□□□□ -0.34
HPS3-206ENST00000486530 C9orf163Q8N9P6 203 aa12.94□□□□□ -0.34
HPS3-206ENST00000486530 A0A1W2PNN7 141 aa12.93□□□□□ -0.34
HPS3-206ENST00000486530 UBL5Q9BZL1 73 aa12.92□□□□□ -0.34
HPS3-206ENST00000486530 ATP5EP2Q5VTU8 51 aa12.9□□□□□ -0.34
HPS3-206ENST00000486530 M0R2N4 97 aa12.89□□□□□ -0.35
HPS3-206ENST00000486530 Q8N377 158 aa12.89□□□□□ -0.35
HPS3-206ENST00000486530 IGKV3D-7A0A0C4DH55 119 aa12.89□□□□□ -0.35
HPS3-206ENST00000486530 LINC01547P58512 204 aaPredicted RBP12.89□□□□□ -0.35
HPS3-206ENST00000486530 FAM236AA0A1B0GUQ0 79 aa12.88□□□□□ -0.35
HPS3-206ENST00000486530 FAM236BA0A1B0GV22 79 aa12.88□□□□□ -0.35
HPS3-206ENST00000486530 DEFB105AQ8NG35 78 aa12.88□□□□□ -0.35
HPS3-206ENST00000486530 UBE2BP63146 152 aa12.87□□□□□ -0.35
HPS3-206ENST00000486530 CHTF8P0CG12 524 aa12.87□□□□□ -0.35
HPS3-206ENST00000486530 LINC00474Q9P2X8 69 aa12.87□□□□□ -0.35
HPS3-206ENST00000486530 IGLV5-48A0A075B6I7 105 aa12.86□□□□□ -0.35
HPS3-206ENST00000486530 Q6ZR54 194 aa12.85□□□□□ -0.35
HPS3-206ENST00000486530 ST20-AS1Q8NBB2 130 aa12.82□□□□□ -0.36
HPS3-206ENST00000486530 ERC2-IT1O76042 136 aa12.82□□□□□ -0.36
HPS3-206ENST00000486530 A0A087WTM6 91 aa12.81□□□□□ -0.36
HPS3-206ENST00000486530 PHF5AQ7RTV0 110 aaKnown RBP12.8□□□□□ -0.36
HPS3-206ENST00000486530 FAM19A1Q7Z5A9 133 aa12.8□□□□□ -0.36
HPS3-206ENST00000486530 C3orf84H3BNL1 204 aa12.8□□□□□ -0.36
HPS3-206ENST00000486530 Q6ZVQ6 151 aa12.8□□□□□ -0.36
HPS3-206ENST00000486530 KMT2AQ03164 3969 aa12.79□□□□□ -0.36
HPS3-206ENST00000486530 HIST1H4AP62805 103 aaKnown RBP12.78□□□□□ -0.36
HPS3-206ENST00000486530 C3orf22Q8N5N4 141 aa12.77□□□□□ -0.37
HPS3-206ENST00000486530 PRLHP81277 87 aa12.76□□□□□ -0.37
HPS3-206ENST00000486530 TNP2Q05952 138 aa12.76□□□□□ -0.37
HPS3-206ENST00000486530 LY6G6CO95867 125 aa12.76□□□□□ -0.37
HPS3-206ENST00000486530 SPACA4Q8TDM5 124 aa12.74□□□□□ -0.37
HPS3-206ENST00000486530 A0A087WVE0 104 aa12.73□□□□□ -0.37
HPS3-206ENST00000486530 H0Y9J4 135 aa12.73□□□□□ -0.37
HPS3-206ENST00000486530 PANO1I0J062 215 aa12.73□□□□□ -0.37
HPS3-206ENST00000486530 KRTAP11-1Q8IUC1 163 aa12.73□□□□□ -0.37
HPS3-206ENST00000486530 LINC00476Q8WZB0 136 aa12.73□□□□□ -0.37
HPS3-206ENST00000486530 CXCL6P80162 114 aa12.72□□□□□ -0.37
HPS3-206ENST00000486530 HAMPP81172 84 aa12.72□□□□□ -0.37
HPS3-206ENST00000486530 DNAH2Q9P225 4427 aa12.71□□□□□ -0.37
HPS3-206ENST00000486530 ATOX1O00244 68 aa12.71□□□□□ -0.37
HPS3-206ENST00000486530 HIGD2AQ9BW72 106 aa12.71□□□□□ -0.37
HPS3-206ENST00000486530 DNAH6Q9C0G6 4158 aa12.7□□□□□ -0.38
HPS3-206ENST00000486530 A0A1B0GW54 56 aa12.7□□□□□ -0.38
HPS3-206ENST00000486530 RTL8CO15255 209 aa12.7□□□□□ -0.38
HPS3-206ENST00000486530 C1orf137Q5JT78 98 aa12.7□□□□□ -0.38
HPS3-206ENST00000486530 C1orf134Q5TEV5 83 aa12.7□□□□□ -0.38
HPS3-206ENST00000486530 EPM2AB3EWF7 344 aa12.7□□□□□ -0.38
HPS3-206ENST00000486530 DPH3Q96FX2 82 aa12.7□□□□□ -0.38
HPS3-206ENST00000486530 FUSP35637 526 aaKnown RBP eCLIP12.69□□□□□ -0.38
HPS3-206ENST00000486530 SMIM29Q86T20 159 aa12.69□□□□□ -0.38
HPS3-206ENST00000486530 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.69□□□□□ -0.38
HPS3-206ENST00000486530 F8WEM9 126 aa12.68□□□□□ -0.38
HPS3-206ENST00000486530 CCDC179H3BU77 68 aa12.67□□□□□ -0.38
HPS3-206ENST00000486530 ALMS1Q8TCU4 4167 aa12.66□□□□□ -0.38
HPS3-206ENST00000486530 UBE2AP49459 152 aa12.65□□□□□ -0.38
HPS3-206ENST00000486530 A0A1W2PNM2 257 aa12.65□□□□□ -0.38
HPS3-206ENST00000486530 BCE1O60756 84 aa12.65□□□□□ -0.38
HPS3-206ENST00000486530 Q8NBF4 154 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms