RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 SMIM6P0DI80 62 aa3.52□□□□□ -1.85
COPS3-208ENST00000486032 VPREB1P12018 145 aa3.52□□□□□ -1.85
COPS3-208ENST00000486032 MRPL55Q7Z7F7 128 aaKnown RBP3.52□□□□□ -1.85
COPS3-208ENST00000486032 LINC00167Q96N53 147 aa3.52□□□□□ -1.85
COPS3-208ENST00000486032 HIST1H4GQ99525 98 aa3.52□□□□□ -1.85
COPS3-208ENST00000486032 SPANXDQ9BXN6 97 aa3.52□□□□□ -1.85
COPS3-208ENST00000486032 SPANXCQ9NY87 97 aa3.52□□□□□ -1.85
COPS3-208ENST00000486032 RPL37AP61513 92 aaKnown RBP3.51□□□□□ -1.85
COPS3-208ENST00000486032 LBHQ53QV2 105 aaPredicted RBP3.51□□□□□ -1.85
COPS3-208ENST00000486032 S100A7L2Q5SY68 101 aa3.51□□□□□ -1.85
COPS3-208ENST00000486032 OR13C6PQ8NH95 151 aa3.51□□□□□ -1.85
COPS3-208ENST00000486032 C12orf57Q99622 126 aa3.51□□□□□ -1.85
COPS3-208ENST00000486032 UQCR10Q9UDW1 63 aa3.51□□□□□ -1.85
COPS3-208ENST00000486032 M0R378 163 aa3.5□□□□□ -1.85
COPS3-208ENST00000486032 DLEU1O43261 78 aa3.5□□□□□ -1.85
COPS3-208ENST00000486032 IFITM1P13164 125 aa3.5□□□□□ -1.85
COPS3-208ENST00000486032 HNRNPA3P51991 378 aaKnown RBP3.5□□□□□ -1.85
COPS3-208ENST00000486032 C1orf137Q5JT78 98 aa3.5□□□□□ -1.85
COPS3-208ENST00000486032 Q5VSD8 79 aa3.5□□□□□ -1.85
COPS3-208ENST00000486032 C2orf91Q6ZV80 131 aa3.5□□□□□ -1.85
COPS3-208ENST00000486032 KRTAP11-1Q8IUC1 163 aa3.5□□□□□ -1.85
COPS3-208ENST00000486032 COPS9Q8WXC6 57 aa3.5□□□□□ -1.85
COPS3-208ENST00000486032 SPANXB1Q9NS25 103 aaPredicted RBP3.5□□□□□ -1.85
COPS3-208ENST00000486032 HERC1Q15751 4861 aa3.49□□□□□ -1.85
COPS3-208ENST00000486032 IGLV5-37A0A075B6J1 123 aa3.49□□□□□ -1.85
COPS3-208ENST00000486032 A6NDN8 102 aa3.49□□□□□ -1.85
COPS3-208ENST00000486032 EPM2AB3EWF7 344 aa3.49□□□□□ -1.85
COPS3-208ENST00000486032 DDTP30046 118 aa3.49□□□□□ -1.85
COPS3-208ENST00000486032 Q6ZVH6 145 aa3.49□□□□□ -1.85
COPS3-208ENST00000486032 PSORS1C2Q9UIG4 136 aa3.49□□□□□ -1.85
COPS3-208ENST00000486032 TRBV10-3A0A0K0K1G6 114 aa3.48□□□□□ -1.85
COPS3-208ENST00000486032 A4D1N5 150 aa3.48□□□□□ -1.85
COPS3-208ENST00000486032 NDUFC2O95298 119 aa3.48□□□□□ -1.85
COPS3-208ENST00000486032 FAM19A1Q7Z5A9 133 aa3.48□□□□□ -1.85
COPS3-208ENST00000486032 LINC00518Q8N0U6 118 aa3.48□□□□□ -1.85
COPS3-208ENST00000486032 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
COPS3-208ENST00000486032 HIGD1BQ9P298 99 aa3.48□□□□□ -1.85
COPS3-208ENST00000486032 IGLV1-50A0A075B6I6 118 aa3.47□□□□□ -1.85
COPS3-208ENST00000486032 LOC107984156A0A0G2JMH3 177 aa3.47□□□□□ -1.85
COPS3-208ENST00000486032 TRBV10-2A0A0K0K1G8 114 aa3.47□□□□□ -1.85
COPS3-208ENST00000486032 TSTD3H0UI37 97 aa3.47□□□□□ -1.85
COPS3-208ENST00000486032 H7C2G1 150 aa3.47□□□□□ -1.85
COPS3-208ENST00000486032 UBE2AP49459 152 aa3.47□□□□□ -1.85
COPS3-208ENST00000486032 CTAG1AP78358 180 aa3.47□□□□□ -1.85
COPS3-208ENST00000486032 HSD52Q0P140 79 aa3.47□□□□□ -1.85
COPS3-208ENST00000486032 REG3GQ6UW15 175 aa3.47□□□□□ -1.85
COPS3-208ENST00000486032 ARL17AQ8IVW1 177 aa3.47□□□□□ -1.85
COPS3-208ENST00000486032 CEND1Q8N111 149 aa3.47□□□□□ -1.85
COPS3-208ENST00000486032 LINC00337Q8N6G1 96 aa3.47□□□□□ -1.85
COPS3-208ENST00000486032 RAB37Q96AX2 223 aa3.47□□□□□ -1.85
COPS3-208ENST00000486032 TRAV23DV6A0A075B6W5 121 aa3.46□□□□□ -1.86
COPS3-208ENST00000486032 TRAV13-2A0A0B4J235 113 aa3.46□□□□□ -1.86
COPS3-208ENST00000486032 ETDCA0A1B0GVM5 59 aa3.46□□□□□ -1.86
COPS3-208ENST00000486032 PRYO14603 147 aa3.46□□□□□ -1.86
COPS3-208ENST00000486032 HINT1P49773 126 aaPredicted RBP3.46□□□□□ -1.86
COPS3-208ENST00000486032 FXYD2P54710 66 aa3.46□□□□□ -1.86
COPS3-208ENST00000486032 KRTAP10-4P60372 401 aaPredicted RBP3.46□□□□□ -1.86
COPS3-208ENST00000486032 PRLHP81277 87 aa3.46□□□□□ -1.86
COPS3-208ENST00000486032 TAL2Q16559 108 aa3.46□□□□□ -1.86
COPS3-208ENST00000486032 TMEM126AQ9H061 195 aa3.46□□□□□ -1.86
COPS3-208ENST00000486032 BCE1O60756 84 aa3.45□□□□□ -1.86
COPS3-208ENST00000486032 IGLV7-43P04211 117 aa3.45□□□□□ -1.86
COPS3-208ENST00000486032 CFC1BP0CG36 223 aa3.45□□□□□ -1.86
COPS3-208ENST00000486032 CFC1P0CG37 223 aa3.45□□□□□ -1.86
COPS3-208ENST00000486032 RPL13AP40429 203 aaKnown RBP3.45□□□□□ -1.86
COPS3-208ENST00000486032 BATFQ16520 125 aa3.45□□□□□ -1.86
COPS3-208ENST00000486032 Q1RN00 199 aa3.45□□□□□ -1.86
COPS3-208ENST00000486032 NHP2Q9NX24 153 aaKnown RBP3.45□□□□□ -1.86
COPS3-208ENST00000486032 PCP4L1A6NKN8 68 aa3.44□□□□□ -1.86
COPS3-208ENST00000486032 K7ERJ3 54 aa3.44□□□□□ -1.86
COPS3-208ENST00000486032 ZNF73O43830 326 aaPredicted RBP3.44□□□□□ -1.86
COPS3-208ENST00000486032 IGLV6-57P01721 117 aa3.44□□□□□ -1.86
COPS3-208ENST00000486032 INAFM2P0DMQ5 153 aa3.44□□□□□ -1.86
COPS3-208ENST00000486032 C6orf99Q4VX62 202 aa3.44□□□□□ -1.86
COPS3-208ENST00000486032 BVES-AS1Q5T3Y7 98 aa3.44□□□□□ -1.86
COPS3-208ENST00000486032 DIRC1Q969H9 104 aa3.44□□□□□ -1.86
COPS3-208ENST00000486032 HIGD2AQ9BW72 106 aa3.44□□□□□ -1.86
COPS3-208ENST00000486032 KCNQ1DNQ9H478 68 aa3.44□□□□□ -1.86
COPS3-208ENST00000486032 COX7BP24311 80 aa3.43□□□□□ -1.86
COPS3-208ENST00000486032 RPL28P46779 137 aaKnown RBP3.43□□□□□ -1.86
COPS3-208ENST00000486032 SMIM11BQ8TCY0 68 aa3.43□□□□□ -1.86
COPS3-208ENST00000486032 PPDPFQ9H3Y8 114 aa3.43□□□□□ -1.86
COPS3-208ENST00000486032 CBY1Q9Y3M2 126 aa3.43□□□□□ -1.86
COPS3-208ENST00000486032 SRRM2Q9UQ35 2752 aaKnown RBP3.43□□□□□ -1.86
COPS3-208ENST00000486032 TNXBP22105 4242 aa3.43□□□□□ -1.86
COPS3-208ENST00000486032 FLG2Q5D862 2391 aaPredicted RBP3.43□□□□□ -1.86
COPS3-208ENST00000486032 A0A0B4J2C4 111 aa3.42□□□□□ -1.86
COPS3-208ENST00000486032 B5MCH6 92 aa3.42□□□□□ -1.86
COPS3-208ENST00000486032 M0R143 59 aa3.42□□□□□ -1.86
COPS3-208ENST00000486032 ZNF861PO60384 105 aa3.42□□□□□ -1.86
COPS3-208ENST00000486032 SPRR1AP35321 89 aa3.42□□□□□ -1.86
COPS3-208ENST00000486032 SPINK6Q6UWN8 80 aa3.42□□□□□ -1.86
COPS3-208ENST00000486032 SMCR5Q8TEV8 140 aa3.42□□□□□ -1.86
COPS3-208ENST00000486032 PRO1854Q9UHT4 67 aa3.42□□□□□ -1.86
COPS3-208ENST00000486032 PSMB2P49721 201 aa3.41□□□□□ -1.86
COPS3-208ENST00000486032 VAMP3Q15836 100 aa3.41□□□□□ -1.86
COPS3-208ENST00000486032 NAA38Q9BRA0 125 aaKnown RBP3.41□□□□□ -1.86
COPS3-208ENST00000486032 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.86
COPS3-208ENST00000486032 KRTAP4-16G5E9R7 235 aaPredicted RBP3.4□□□□□ -1.87
COPS3-208ENST00000486032 H0Y9J4 135 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms