RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 SERP1Q9Y6X1 66 aa14.74□□□□□ -0.05
CLN5-202ENST00000485938 F8WDY8 70 aa14.72□□□□□ -0.05
CLN5-202ENST00000485938 SYCNQ0VAF6 134 aa14.72□□□□□ -0.05
CLN5-202ENST00000485938 KCNQ1DNQ9H478 68 aa14.72□□□□□ -0.05
CLN5-202ENST00000485938 PKD1L1Q8TDX9 2849 aa14.71□□□□□ -0.05
CLN5-202ENST00000485938 IGKV2D-24A0A075B6R9 120 aa14.71□□□□□ -0.05
CLN5-202ENST00000485938 F8WEM9 126 aa14.7□□□□□ -0.06
CLN5-202ENST00000485938 BPY2O14599 106 aa14.7□□□□□ -0.06
CLN5-202ENST00000485938 NREPQ16612 68 aa14.7□□□□□ -0.06
CLN5-202ENST00000485938 LINC01556Q5JQF7 62 aa14.7□□□□□ -0.06
CLN5-202ENST00000485938 Q8N9L7 120 aa14.7□□□□□ -0.06
CLN5-202ENST00000485938 IGKV4-1P06312 121 aa14.69□□□□□ -0.06
CLN5-202ENST00000485938 SERTAD4-AS1Q5TG53 156 aa14.69□□□□□ -0.06
CLN5-202ENST00000485938 NKAPP1Q8N9T2 125 aa14.68□□□□□ -0.06
CLN5-202ENST00000485938 C7orf33Q8WU49 177 aa14.68□□□□□ -0.06
CLN5-202ENST00000485938 Q8N377 158 aa14.67□□□□□ -0.06
CLN5-202ENST00000485938 HRCT1Q6UXD1 115 aa14.66□□□□□ -0.06
CLN5-202ENST00000485938 NDUFC1O43677 76 aa14.66□□□□□ -0.06
CLN5-202ENST00000485938 KRTAP10-11P60412 298 aa14.65□□□□□ -0.06
CLN5-202ENST00000485938 DEFB105AQ8NG35 78 aa14.65□□□□□ -0.06
CLN5-202ENST00000485938 OXLD1Q5BKU9 147 aa14.65□□□□□ -0.06
CLN5-202ENST00000485938 C3orf84H3BNL1 204 aa14.64□□□□□ -0.07
CLN5-202ENST00000485938 IGLV5-48A0A075B6I7 105 aa14.63□□□□□ -0.07
CLN5-202ENST00000485938 ERC2-IT1O76042 136 aa14.63□□□□□ -0.07
CLN5-202ENST00000485938 TMEM254Q8TBM7 123 aa14.62□□□□□ -0.07
CLN5-202ENST00000485938 TENM3Q9P273 2699 aa14.6□□□□□ -0.07
CLN5-202ENST00000485938 DEFB131BA0A096LNP1 70 aa14.59□□□□□ -0.07
CLN5-202ENST00000485938 OCR1Q9BZK8 76 aa14.59□□□□□ -0.07
CLN5-202ENST00000485938 TLX1NBP0CAT3 122 aa14.58□□□□□ -0.08
CLN5-202ENST00000485938 DHRS4-AS1Q9P1J3 65 aa14.58□□□□□ -0.08
CLN5-202ENST00000485938 PLA2G2DQ9UNK4 145 aa14.58□□□□□ -0.08
CLN5-202ENST00000485938 Q6ZRX8 168 aa14.58□□□□□ -0.08
CLN5-202ENST00000485938 KRTAP4-16G5E9R7 235 aaPredicted RBP14.57□□□□□ -0.08
CLN5-202ENST00000485938 DNAH10OSP0CZ25 163 aa14.56□□□□□ -0.08
CLN5-202ENST00000485938 Q9BRP9 147 aa14.56□□□□□ -0.08
CLN5-202ENST00000485938 RPL37AP8A6NKH3 93 aa14.55□□□□□ -0.08
CLN5-202ENST00000485938 ATP5EP56381 51 aaPredicted RBP14.55□□□□□ -0.08
CLN5-202ENST00000485938 FBN1P35555 2871 aaKnown RBP14.55□□□□□ -0.08
CLN5-202ENST00000485938 FAM168BA1KXE4 195 aa14.53□□□□□ -0.08
CLN5-202ENST00000485938 FUSP35637 526 aaKnown RBP eCLIP14.53□□□□□ -0.08
CLN5-202ENST00000485938 C11orf45Q8TAV5 145 aa14.53□□□□□ -0.08
CLN5-202ENST00000485938 IGLV1-50A0A075B6I6 118 aa14.53□□□□□ -0.08
CLN5-202ENST00000485938 IGLV5-37A0A075B6J1 123 aa14.53□□□□□ -0.08
CLN5-202ENST00000485938 A0A1W2PNM2 257 aa14.53□□□□□ -0.08
CLN5-202ENST00000485938 PRYO14603 147 aa14.53□□□□□ -0.08
CLN5-202ENST00000485938 A0A0U1RQV1 116 aa14.52□□□□□ -0.08
CLN5-202ENST00000485938 A0A1B0GW54 56 aa14.52□□□□□ -0.08
CLN5-202ENST00000485938 SPRR1AP35321 89 aa14.52□□□□□ -0.08
CLN5-202ENST00000485938 TNP2Q05952 138 aa14.52□□□□□ -0.08
CLN5-202ENST00000485938 SMIM26A0A096LP01 95 aa14.51□□□□□ -0.09
CLN5-202ENST00000485938 KRTAP24-1Q3LI83 254 aa14.51□□□□□ -0.09
CLN5-202ENST00000485938 ETDCA0A1B0GVM5 59 aa14.49□□□□□ -0.09
CLN5-202ENST00000485938 FP248Q71RG6 208 aaPredicted RBP14.49□□□□□ -0.09
CLN5-202ENST00000485938 STAB1Q9NY15 2570 aa14.49□□□□□ -0.09
CLN5-202ENST00000485938 KRTAP7-1Q8IUC3 87 aa14.49□□□□□ -0.09
CLN5-202ENST00000485938 ST20-AS1Q8NBB2 130 aa14.49□□□□□ -0.09
CLN5-202ENST00000485938 MRAPQ8TCY5 172 aa14.49□□□□□ -0.09
CLN5-202ENST00000485938 C1orf137Q5JT78 98 aa14.48□□□□□ -0.09
CLN5-202ENST00000485938 CASC10Q5T4H9 136 aa14.48□□□□□ -0.09
CLN5-202ENST00000485938 ANK2Q01484 3957 aa14.47□□□□□ -0.09
CLN5-202ENST00000485938 Q8NBF4 154 aa14.46□□□□□ -0.1
CLN5-202ENST00000485938 SMIM29Q86T20 159 aa14.43□□□□□ -0.1
CLN5-202ENST00000485938 SPRR4Q96PI1 79 aa14.42□□□□□ -0.1
CLN5-202ENST00000485938 LINC00588Q9Y4M8 146 aa14.42□□□□□ -0.1
CLN5-202ENST00000485938 HIGD2AQ9BW72 106 aa14.42□□□□□ -0.1
CLN5-202ENST00000485938 BAHCC1Q9P281 2608 aa14.41□□□□□ -0.1
CLN5-202ENST00000485938 LINC00474Q9P2X8 69 aa14.41□□□□□ -0.1
CLN5-202ENST00000485938 MAST4O15021 2626 aa14.4□□□□□ -0.1
CLN5-202ENST00000485938 MRPL55Q7Z7F7 128 aaKnown RBP14.4□□□□□ -0.1
CLN5-202ENST00000485938 FAM30AQ9NZY2 134 aa14.38□□□□□ -0.11
CLN5-202ENST00000485938 CMYA5Q8N3K9 4069 aa14.38□□□□□ -0.11
CLN5-202ENST00000485938 DSCR10P59022 87 aa14.36□□□□□ -0.11
CLN5-202ENST00000485938 LCE6AA0A183 80 aa14.36□□□□□ -0.11
CLN5-202ENST00000485938 UBE2BP63146 152 aa14.36□□□□□ -0.11
CLN5-202ENST00000485938 LINC00336Q6ZUF6 198 aa14.35□□□□□ -0.11
CLN5-202ENST00000485938 DNAH1Q9P2D7 4330 aa14.33□□□□□ -0.12
CLN5-202ENST00000485938 FAM229BQ4G0N7 80 aa14.32□□□□□ -0.12
CLN5-202ENST00000485938 REG3GQ6UW15 175 aa14.32□□□□□ -0.12
CLN5-202ENST00000485938 K7EQZ3 153 aa14.31□□□□□ -0.12
CLN5-202ENST00000485938 LINC00476Q8WZB0 136 aa14.29□□□□□ -0.12
CLN5-202ENST00000485938 COL6A5A8TX70 2615 aa14.28□□□□□ -0.12
CLN5-202ENST00000485938 DNAH3Q8TD57 4116 aa14.28□□□□□ -0.12
CLN5-202ENST00000485938 PRO0628Q9UI54 55 aa14.26□□□□□ -0.13
CLN5-202ENST00000485938 A0A0G2JQZ4 141 aa14.24□□□□□ -0.13
CLN5-202ENST00000485938 A0A1W2PNN7 141 aa14.24□□□□□ -0.13
CLN5-202ENST00000485938 ZCCHC13Q8WW36 166 aaKnown RBP14.24□□□□□ -0.13
CLN5-202ENST00000485938 NOTCH1P46531 2555 aa14.23□□□□□ -0.13
CLN5-202ENST00000485938 IGFL1Q6UW32 110 aa14.22□□□□□ -0.13
CLN5-202ENST00000485938 HCG22E2RYF7 251 aa14.2□□□□□ -0.14
CLN5-202ENST00000485938 PSCAO43653 123 aa14.19□□□□□ -0.14
CLN5-202ENST00000485938 PRB2P02812 416 aaPredicted RBP14.19□□□□□ -0.14
CLN5-202ENST00000485938 MPLKIPQ8TAP9 179 aa14.19□□□□□ -0.14
CLN5-202ENST00000485938 A0A096LNI7 61 aa14.17□□□□□ -0.14
CLN5-202ENST00000485938 PRLHP81277 87 aa14.17□□□□□ -0.14
CLN5-202ENST00000485938 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.16□□□□□ -0.14
CLN5-202ENST00000485938 IGLV8-61A0A075B6I0 122 aa14.16□□□□□ -0.14
CLN5-202ENST00000485938 hDV103S1A0JD37 113 aa14.15□□□□□ -0.14
CLN5-202ENST00000485938 C16orf90A8MZG2 172 aa14.14□□□□□ -0.15
CLN5-202ENST00000485938 IGKV2-24A0A0C4DH68 120 aa14.13□□□□□ -0.15
CLN5-202ENST00000485938 DEFB116Q30KQ4 102 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms