RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 LY6HO94772 140 aa1.93□□□□□ -2.1
PKP4-212ENST00000483881 IGHV1-46P01743 117 aa1.93□□□□□ -2.1
PKP4-212ENST00000483881 IGHV3-11P01762 117 aa1.93□□□□□ -2.1
PKP4-212ENST00000483881 P0C880 135 aa1.93□□□□□ -2.1
PKP4-212ENST00000483881 ARL14EPLP0DKL9 152 aa1.93□□□□□ -2.1
PKP4-212ENST00000483881 SFTA2Q6UW10 78 aa1.93□□□□□ -2.1
PKP4-212ENST00000483881 SPTSSBQ8NFR3 76 aa1.93□□□□□ -2.1
PKP4-212ENST00000483881 GAFA1Q96PS6 74 aa1.93□□□□□ -2.1
PKP4-212ENST00000483881 FAM215AQ9Y5M1 114 aa1.93□□□□□ -2.1
PKP4-212ENST00000483881 COL27A1Q8IZC6 1860 aaPredicted RBP1.92□□□□□ -2.1
PKP4-212ENST00000483881 IGLV4-69A0A075B6H9 119 aa1.92□□□□□ -2.1
PKP4-212ENST00000483881 A0A0J9YY99 117 aa1.92□□□□□ -2.1
PKP4-212ENST00000483881 ZNF861PO60384 105 aa1.92□□□□□ -2.1
PKP4-212ENST00000483881 SAA2P0DJI9 122 aaPredicted RBP1.92□□□□□ -2.1
PKP4-212ENST00000483881 CCL3L1P16619 93 aa1.92□□□□□ -2.1
PKP4-212ENST00000483881 FXYD7P58549 80 aa1.92□□□□□ -2.1
PKP4-212ENST00000483881 MIAQ16674 131 aa1.92□□□□□ -2.1
PKP4-212ENST00000483881 RNASE13Q5GAN3 156 aaKnown RBP1.92□□□□□ -2.1
PKP4-212ENST00000483881 PLAC8Q9NZF1 115 aa1.92□□□□□ -2.1
PKP4-212ENST00000483881 KLK12Q9UKR0 248 aa1.92□□□□□ -2.1
PKP4-212ENST00000483881 SNURFQ9Y675 71 aa1.92□□□□□ -2.1
PKP4-212ENST00000483881 DIDO1Q9BTC0 2240 aaKnown RBP1.92□□□□□ -2.1
PKP4-212ENST00000483881 FLG2Q5D862 2391 aaPredicted RBP1.92□□□□□ -2.1
PKP4-212ENST00000483881 TRRAPQ9Y4A5 3859 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 FREM1Q5H8C1 2179 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 IGLV4-60A0A075B6I1 120 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 IGKV1OR2-108A0A075B7D4 117 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 A0A087WSZ3 146 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 IGHV3-21A0A0B4J1V1 117 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 IGKV3D-7A0A0C4DH55 119 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 LCE6AA0A183 80 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 CLPSL1A2RUU4 121 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 ZNF815PA8K554 130 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 A8MWP4 228 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 CHKB-CPT1BH3BT56 60 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 LECT2O14960 151 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 SPINK4O60575 86 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 IGHV1-69P01742 117 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 TRGV3P03979 118 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 ARMS2P0C7Q2 107 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 FCER1GP30273 86 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 PRCDQ00LT1 54 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 PRB3Q04118 309 aaPredicted RBP1.91□□□□□ -2.1
PKP4-212ENST00000483881 FXYD3Q14802 87 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 C10orf55Q5SWW7 151 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 C1orf64Q8NEQ6 169 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 LINC00467Q9BRT7 94 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 LINC00846Q9NV44 126 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 MRPL36Q9P0J6 103 aaKnown RBP1.91□□□□□ -2.1
PKP4-212ENST00000483881 CEP192Q8TEP8 1941 aa1.91□□□□□ -2.1
PKP4-212ENST00000483881 TNRC6BQ9UPQ9 1833 aaKnown RBP1.91□□□□□ -2.1
PKP4-212ENST00000483881 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.9□□□□□ -2.11
PKP4-212ENST00000483881 IGKV2-28A0A075B6P5 120 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 IGKV1D-37A0A075B6S9 117 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 TRAV23DV6A0A075B6W5 121 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 IGHV3OR16-8A0A075B7F1 116 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 TRAV12-1A0A0B4J245 112 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 IGHV7-4-1A0A0J9YVY3 117 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 IGIPA6NJ69 53 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 LYNX1G3V0Z9 82 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 IGKV2D-28P01615 120 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 COX6CP09669 75 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 LYNX1P0DP58 116 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 ERHP84090 104 aaKnown RBP1.9□□□□□ -2.11
PKP4-212ENST00000483881 LUZP6Q538Z0 58 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 HCP5Q6MZN7 132 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 LYZL1Q6UWQ5 148 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 Q6ZQT0 140 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 ZNF833PQ6ZTB9 187 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 MUC7Q8TAX7 377 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 TMEM254Q8TBM7 123 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 TMEM167AQ8TBQ9 72 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 AMELXQ99217 191 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 NDUFA4L2Q9NRX3 87 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 TMEM167BQ9NRX6 74 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 ZNF355PQ9NSJ1 428 aa1.9□□□□□ -2.11
PKP4-212ENST00000483881 ABCA1O95477 2261 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 SRRM2Q9UQ35 2752 aaKnown RBP1.89□□□□□ -2.11
PKP4-212ENST00000483881 IGKV2D-24A0A075B6R9 120 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 IGHV3-73A0A0B4J1V6 119 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 A0A1W2PNM2 257 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 HIGD1CA8MV81 97 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 APELAP0DMC3 54 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 CD24P25063 80 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 PLNP26678 52 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 WT1-ASQ06250 92 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 CASC2Q6XLA1 102 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 LINC00322Q6ZN03 302 aaPredicted RBP1.89□□□□□ -2.11
PKP4-212ENST00000483881 C15orf56Q8N910 161 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 ZCCHC13Q8WW36 166 aaKnown RBP1.89□□□□□ -2.11
PKP4-212ENST00000483881 CAMK2N2Q96S95 79 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 ICOSQ9Y6W8 199 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 PRR14LQ5THK1 2151 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 MALRD1Q5VYJ5 2156 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 DOCK10Q96BY6 2186 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 DNAJC13O75165 2243 aa1.89□□□□□ -2.11
PKP4-212ENST00000483881 TRAV10A0A0B4J240 114 aa1.88□□□□□ -2.11
PKP4-212ENST00000483881 TRAV40A0A0B4J280 105 aa1.88□□□□□ -2.11
PKP4-212ENST00000483881 A0A0J9YX75 114 aa1.88□□□□□ -2.11
PKP4-212ENST00000483881 A0A1B0GVX0 72 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms