RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 SLPIP03973 132 aa3.52□□□□□ -1.85
COL17A1-206ENST00000483876 ETDBQ3ZM63 59 aa3.52□□□□□ -1.85
COL17A1-206ENST00000483876 S100A7L2Q5SY68 101 aa3.52□□□□□ -1.85
COL17A1-206ENST00000483876 Q5VSD8 79 aa3.52□□□□□ -1.85
COL17A1-206ENST00000483876 Q6ZRP5 223 aa3.52□□□□□ -1.85
COL17A1-206ENST00000483876 PKIGQ9Y2B9 76 aa3.52□□□□□ -1.85
COL17A1-206ENST00000483876 FAT4Q6V0I7 4981 aa3.52□□□□□ -1.85
COL17A1-206ENST00000483876 DNAH6Q9C0G6 4158 aa3.51□□□□□ -1.85
COL17A1-206ENST00000483876 IGLV5-37A0A075B6J1 123 aa3.51□□□□□ -1.85
COL17A1-206ENST00000483876 H3BQ85 93 aa3.51□□□□□ -1.85
COL17A1-206ENST00000483876 VPREB1P12018 145 aa3.51□□□□□ -1.85
COL17A1-206ENST00000483876 PRR3P79522 188 aaKnown RBP3.51□□□□□ -1.85
COL17A1-206ENST00000483876 PPDPFLQ8WWR9 84 aa3.51□□□□□ -1.85
COL17A1-206ENST00000483876 CLEC2BQ92478 149 aa3.51□□□□□ -1.85
COL17A1-206ENST00000483876 KRTAP1-5Q9BYS1 174 aa3.51□□□□□ -1.85
COL17A1-206ENST00000483876 DNAH5Q8TE73 4624 aa3.51□□□□□ -1.85
COL17A1-206ENST00000483876 LOC107984640A0A0U1RRK4 108 aa3.5□□□□□ -1.85
COL17A1-206ENST00000483876 M0R2N4 97 aa3.5□□□□□ -1.85
COL17A1-206ENST00000483876 PSCAO43653 123 aa3.5□□□□□ -1.85
COL17A1-206ENST00000483876 GHRHP01286 108 aa3.5□□□□□ -1.85
COL17A1-206ENST00000483876 BAALC-AS2P0C853 105 aa3.5□□□□□ -1.85
COL17A1-206ENST00000483876 LORP23490 312 aaPredicted RBP3.5□□□□□ -1.85
COL17A1-206ENST00000483876 C9orf129Q5T035 196 aaKnown RBP3.5□□□□□ -1.85
COL17A1-206ENST00000483876 Q8NDZ9 215 aa3.5□□□□□ -1.85
COL17A1-206ENST00000483876 LINC00167Q96N53 147 aa3.5□□□□□ -1.85
COL17A1-206ENST00000483876 XAGE1AQ9HD64 81 aa3.5□□□□□ -1.85
COL17A1-206ENST00000483876 TRBV10-3A0A0K0K1G6 114 aa3.49□□□□□ -1.85
COL17A1-206ENST00000483876 LRCOL1A6NCL2 159 aa3.49□□□□□ -1.85
COL17A1-206ENST00000483876 KRTAP29-1A8MX34 341 aaPredicted RBP3.49□□□□□ -1.85
COL17A1-206ENST00000483876 DNAL4O96015 105 aa3.49□□□□□ -1.85
COL17A1-206ENST00000483876 RPL18AQ02543 176 aaKnown RBP3.49□□□□□ -1.85
COL17A1-206ENST00000483876 GAGE2EQ4V326 116 aa3.49□□□□□ -1.85
COL17A1-206ENST00000483876 Q6ZR54 194 aa3.49□□□□□ -1.85
COL17A1-206ENST00000483876 Q6ZRN7 208 aaPredicted RBP3.49□□□□□ -1.85
COL17A1-206ENST00000483876 Q8N814 137 aa3.49□□□□□ -1.85
COL17A1-206ENST00000483876 FAM218AQ96MZ4 157 aa3.49□□□□□ -1.85
COL17A1-206ENST00000483876 KCNQ1DNQ9H478 68 aa3.49□□□□□ -1.85
COL17A1-206ENST00000483876 GAGE2DQ9UEU5 116 aa3.49□□□□□ -1.85
COL17A1-206ENST00000483876 TRAV23DV6A0A075B6W5 121 aa3.48□□□□□ -1.85
COL17A1-206ENST00000483876 TMEM256-PLSCR3K7ERE1 68 aa3.48□□□□□ -1.85
COL17A1-206ENST00000483876 NCR3O14931 201 aa3.48□□□□□ -1.85
COL17A1-206ENST00000483876 ZNF73O43830 326 aaPredicted RBP3.48□□□□□ -1.85
COL17A1-206ENST00000483876 C6orf99Q4VX62 202 aa3.48□□□□□ -1.85
COL17A1-206ENST00000483876 LINC00575Q6W349 94 aa3.48□□□□□ -1.85
COL17A1-206ENST00000483876 C9orf163Q8N9P6 203 aa3.48□□□□□ -1.85
COL17A1-206ENST00000483876 CRCT1Q9UGL9 99 aa3.48□□□□□ -1.85
COL17A1-206ENST00000483876 A0A087WYN8 130 aa3.47□□□□□ -1.85
COL17A1-206ENST00000483876 hADV29S1A0JD25 119 aa3.47□□□□□ -1.85
COL17A1-206ENST00000483876 LECT2O14960 151 aa3.47□□□□□ -1.85
COL17A1-206ENST00000483876 MTURNQ8N3F0 131 aa3.47□□□□□ -1.85
COL17A1-206ENST00000483876 NKAPP1Q8N9T2 125 aa3.47□□□□□ -1.85
COL17A1-206ENST00000483876 DIRC1Q969H9 104 aa3.47□□□□□ -1.85
COL17A1-206ENST00000483876 OBSCN-AS1Q96MR7 158 aa3.47□□□□□ -1.85
COL17A1-206ENST00000483876 ORMDL1Q9P0S3 153 aa3.47□□□□□ -1.85
COL17A1-206ENST00000483876 LINC00474Q9P2X8 69 aa3.47□□□□□ -1.85
COL17A1-206ENST00000483876 FSIP2Q5CZC0 6907 aa3.47□□□□□ -1.85
COL17A1-206ENST00000483876 IGLV1-50A0A075B6I6 118 aa3.46□□□□□ -1.86
COL17A1-206ENST00000483876 TEX49A0A1B0GTD5 131 aa3.46□□□□□ -1.86
COL17A1-206ENST00000483876 FAM240AA0A1B0GVK7 77 aa3.46□□□□□ -1.86
COL17A1-206ENST00000483876 JMJD7-PLA2G4BH0Y9G9 81 aa3.46□□□□□ -1.86
COL17A1-206ENST00000483876 ACYP1P07311 99 aa3.46□□□□□ -1.86
COL17A1-206ENST00000483876 COX7BP24311 80 aa3.46□□□□□ -1.86
COL17A1-206ENST00000483876 ELOF1P60002 83 aaKnown RBP3.46□□□□□ -1.86
COL17A1-206ENST00000483876 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.46□□□□□ -1.86
COL17A1-206ENST00000483876 SDIM1Q6ZPB5 146 aa3.46□□□□□ -1.86
COL17A1-206ENST00000483876 C7orf33Q8WU49 177 aa3.46□□□□□ -1.86
COL17A1-206ENST00000483876 C22orf24Q9Y442 160 aa3.46□□□□□ -1.86
COL17A1-206ENST00000483876 PRYO14603 147 aa3.45□□□□□ -1.86
COL17A1-206ENST00000483876 SPRR1AP35321 89 aa3.45□□□□□ -1.86
COL17A1-206ENST00000483876 GAGE2BQ13066 116 aa3.45□□□□□ -1.86
COL17A1-206ENST00000483876 KRTAP7-1Q8IUC3 87 aa3.45□□□□□ -1.86
COL17A1-206ENST00000483876 FAT1Q14517 4588 aa3.44□□□□□ -1.86
COL17A1-206ENST00000483876 A0A087WTM6 91 aa3.44□□□□□ -1.86
COL17A1-206ENST00000483876 KRTAP4-16G5E9R7 235 aaPredicted RBP3.44□□□□□ -1.86
COL17A1-206ENST00000483876 TNP2Q05952 138 aa3.44□□□□□ -1.86
COL17A1-206ENST00000483876 C21orf62-AS1Q17RA5 79 aa3.44□□□□□ -1.86
COL17A1-206ENST00000483876 C1orf134Q5TEV5 83 aa3.44□□□□□ -1.86
COL17A1-206ENST00000483876 MRPL55Q7Z7F7 128 aaKnown RBP3.44□□□□□ -1.86
COL17A1-206ENST00000483876 VPS25Q9BRG1 176 aa3.44□□□□□ -1.86
COL17A1-206ENST00000483876 DHRS4-AS1Q9P1J3 65 aa3.44□□□□□ -1.86
COL17A1-206ENST00000483876 VPS13BQ7Z7G8 4022 aa3.43□□□□□ -1.86
COL17A1-206ENST00000483876 A0A096LNI7 61 aa3.43□□□□□ -1.86
COL17A1-206ENST00000483876 FAM229AH3BQW9 127 aa3.43□□□□□ -1.86
COL17A1-206ENST00000483876 PDE6GP18545 87 aa3.43□□□□□ -1.86
COL17A1-206ENST00000483876 LRP2P98164 4655 aa3.43□□□□□ -1.86
COL17A1-206ENST00000483876 FAM168BA1KXE4 195 aa3.42□□□□□ -1.86
COL17A1-206ENST00000483876 B5MCH6 92 aa3.42□□□□□ -1.86
COL17A1-206ENST00000483876 H0Y9J4 135 aa3.42□□□□□ -1.86
COL17A1-206ENST00000483876 Q6ZRX8 168 aa3.42□□□□□ -1.86
COL17A1-206ENST00000483876 SIGMAR1Q99720 223 aa3.42□□□□□ -1.86
COL17A1-206ENST00000483876 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.41□□□□□ -1.86
COL17A1-206ENST00000483876 A0A1W2PNN7 141 aa3.41□□□□□ -1.86
COL17A1-206ENST00000483876 SMR3BP02814 79 aaPredicted RBP3.41□□□□□ -1.86
COL17A1-206ENST00000483876 XGP55808 180 aa3.41□□□□□ -1.86
COL17A1-206ENST00000483876 RBM3P98179 157 aaKnown RBP3.41□□□□□ -1.86
COL17A1-206ENST00000483876 REG3GQ6UW15 175 aa3.41□□□□□ -1.86
COL17A1-206ENST00000483876 Q6ZQY7 126 aa3.41□□□□□ -1.86
COL17A1-206ENST00000483876 FAM19A5Q7Z5A7 132 aaPredicted RBP3.41□□□□□ -1.86
COL17A1-206ENST00000483876 CDIP1Q9H305 208 aa3.41□□□□□ -1.86
COL17A1-206ENST00000483876 LOC110117498A0A087WWA1 95 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms