RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 HSPB8Q9UJY1 196 aa10.01□□□□□ -0.81
ATG4B-221ENST00000483778 COLCA2A8K830 154 aa10□□□□□ -0.81
ATG4B-221ENST00000483778 NMUP48645 174 aa10□□□□□ -0.81
ATG4B-221ENST00000483778 HERVK_113P61574 105 aa10□□□□□ -0.81
ATG4B-221ENST00000483778 TRAV23DV6A0A075B6W5 121 aa9.99□□□□□ -0.81
ATG4B-221ENST00000483778 MIEN1Q9BRT3 115 aa9.99□□□□□ -0.81
ATG4B-221ENST00000483778 RPS29P62273 56 aaKnown RBP9.98□□□□□ -0.81
ATG4B-221ENST00000483778 SLC25A20O43772 301 aa9.97□□□□□ -0.81
ATG4B-221ENST00000483778 ZNF73O43830 326 aaPredicted RBP9.97□□□□□ -0.81
ATG4B-221ENST00000483778 KRTAP9-6A0A140TA67 174 aa9.96□□□□□ -0.82
ATG4B-221ENST00000483778 C9orf153Q5TBE3 101 aa9.96□□□□□ -0.82
ATG4B-221ENST00000483778 LITAFQ99732 161 aa9.96□□□□□ -0.82
ATG4B-221ENST00000483778 E9PLD3 99 aa9.95□□□□□ -0.82
ATG4B-221ENST00000483778 SEC61BP60468 96 aaKnown RBP9.95□□□□□ -0.82
ATG4B-221ENST00000483778 JOSD1Q15040 202 aaPredicted RBP9.93□□□□□ -0.82
ATG4B-221ENST00000483778 XP32Q5T750 250 aa9.93□□□□□ -0.82
ATG4B-221ENST00000483778 LINC00308Q8TCZ7 52 aa9.92□□□□□ -0.82
ATG4B-221ENST00000483778 TTTY13Q9BZ97 58 aa9.91□□□□□ -0.82
ATG4B-221ENST00000483778 SYS1-DBNDD2H3BUS1 97 aa9.9□□□□□ -0.82
ATG4B-221ENST00000483778 LINC01547P58512 204 aaPredicted RBP9.9□□□□□ -0.82
ATG4B-221ENST00000483778 HRCT1Q6UXD1 115 aa9.9□□□□□ -0.82
ATG4B-221ENST00000483778 LCE2CQ5TA81 110 aa9.89□□□□□ -0.83
ATG4B-221ENST00000483778 OR13C6PQ8NH95 151 aa9.89□□□□□ -0.83
ATG4B-221ENST00000483778 SPRR1BP22528 89 aa9.88□□□□□ -0.83
ATG4B-221ENST00000483778 SPANXCQ9NY87 97 aa9.86□□□□□ -0.83
ATG4B-221ENST00000483778 C5orf52A6NGY3 159 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 HIST1H2BKO60814 126 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 TIMM17BO60830 172 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 HIST1H2BJP06899 126 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 HIST1H2BOP23527 126 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 HIST1H2BBP33778 126 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 HIST1H2BDP58876 126 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 HIST1H2BCP62807 126 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 HIST2H2BEQ16778 126 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 KRTAP19-2Q3LHN2 52 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.85□□□□□ -0.83
ATG4B-221ENST00000483778 LINC01545Q5VT33 79 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 HIST1H2BHQ93079 126 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 HIST1H2BNQ99877 126 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 HIST1H2BMQ99879 126 aa9.85□□□□□ -0.83
ATG4B-221ENST00000483778 HINT1P49773 126 aaPredicted RBP9.84□□□□□ -0.83
ATG4B-221ENST00000483778 ZNF815PA8K554 130 aa9.83□□□□□ -0.84
ATG4B-221ENST00000483778 C9orf92A6NGG3 77 aa9.82□□□□□ -0.84
ATG4B-221ENST00000483778 DHRS4-AS1Q9P1J3 65 aa9.82□□□□□ -0.84
ATG4B-221ENST00000483778 C6orf99Q4VX62 202 aa9.81□□□□□ -0.84
ATG4B-221ENST00000483778 DEFB105AQ8NG35 78 aa9.81□□□□□ -0.84
ATG4B-221ENST00000483778 SPANXDQ9BXN6 97 aa9.81□□□□□ -0.84
ATG4B-221ENST00000483778 A0A0G2JQZ4 141 aa9.8□□□□□ -0.84
ATG4B-221ENST00000483778 COX7BP24311 80 aa9.8□□□□□ -0.84
ATG4B-221ENST00000483778 ELOF1P60002 83 aaKnown RBP9.8□□□□□ -0.84
ATG4B-221ENST00000483778 Q1RN00 199 aa9.8□□□□□ -0.84
ATG4B-221ENST00000483778 PCOTHQ58A44 107 aa9.8□□□□□ -0.84
ATG4B-221ENST00000483778 C3orf79P0CE67 100 aa9.79□□□□□ -0.84
ATG4B-221ENST00000483778 S100A1P23297 94 aa9.79□□□□□ -0.84
ATG4B-221ENST00000483778 LCE2DQ5TA82 110 aaPredicted RBP9.79□□□□□ -0.84
ATG4B-221ENST00000483778 PET117Q6UWS5 81 aa9.79□□□□□ -0.84
ATG4B-221ENST00000483778 LAMTOR3Q9UHA4 124 aa9.79□□□□□ -0.84
ATG4B-221ENST00000483778 CBY1Q9Y3M2 126 aa9.79□□□□□ -0.84
ATG4B-221ENST00000483778 TAL2Q16559 108 aa9.78□□□□□ -0.84
ATG4B-221ENST00000483778 H7C2G1 150 aa9.77□□□□□ -0.85
ATG4B-221ENST00000483778 SMIM29Q86T20 159 aa9.77□□□□□ -0.85
ATG4B-221ENST00000483778 SLC25A34Q6PIV7 304 aa9.75□□□□□ -0.85
ATG4B-221ENST00000483778 LINC00518Q8N0U6 118 aa9.75□□□□□ -0.85
ATG4B-221ENST00000483778 LIMD2Q9BT23 127 aa9.75□□□□□ -0.85
ATG4B-221ENST00000483778 IGLV8-61A0A075B6I0 122 aa9.74□□□□□ -0.85
ATG4B-221ENST00000483778 ANKRD39Q53RE8 183 aa9.74□□□□□ -0.85
ATG4B-221ENST00000483778 TEX49A0A1B0GTD5 131 aa9.73□□□□□ -0.85
ATG4B-221ENST00000483778 KRTDAPP60985 99 aa9.72□□□□□ -0.85
ATG4B-221ENST00000483778 MT1HP80294 61 aa9.72□□□□□ -0.85
ATG4B-221ENST00000483778 PRO1933Q9H354 126 aa9.72□□□□□ -0.85
ATG4B-221ENST00000483778 CD164Q04900 197 aa9.71□□□□□ -0.86
ATG4B-221ENST00000483778 C1orf195Q5TG92 126 aa9.7□□□□□ -0.86
ATG4B-221ENST00000483778 ATOH7Q8N100 152 aa9.7□□□□□ -0.86
ATG4B-221ENST00000483778 TRBV7-6A0A0J9YX20 115 aa9.69□□□□□ -0.86
ATG4B-221ENST00000483778 SCGB1D4Q6XE38 83 aa9.69□□□□□ -0.86
ATG4B-221ENST00000483778 MUSTN1Q8IVN3 82 aa9.69□□□□□ -0.86
ATG4B-221ENST00000483778 A6NDN8 102 aa9.68□□□□□ -0.86
ATG4B-221ENST00000483778 COA6Q5JTJ3 125 aaKnown RBP9.68□□□□□ -0.86
ATG4B-221ENST00000483778 PCP2Q8IVA1 136 aa9.68□□□□□ -0.86
ATG4B-221ENST00000483778 IGLV5-48A0A075B6I7 105 aa9.67□□□□□ -0.86
ATG4B-221ENST00000483778 AKR1D1P51857 326 aa9.67□□□□□ -0.86
ATG4B-221ENST00000483778 A0A1B0GWB2 263 aa9.66□□□□□ -0.86
ATG4B-221ENST00000483778 Q5XG85 94 aa9.65□□□□□ -0.86
ATG4B-221ENST00000483778 CRCT1Q9UGL9 99 aa9.65□□□□□ -0.86
ATG4B-221ENST00000483778 IFITM1P13164 125 aa9.64□□□□□ -0.87
ATG4B-221ENST00000483778 SMIM11BQ8TCY0 68 aa9.64□□□□□ -0.87
ATG4B-221ENST00000483778 Q6ZVH6 145 aa9.59□□□□□ -0.87
ATG4B-221ENST00000483778 RPL37P61927 97 aaKnown RBP9.58□□□□□ -0.88
ATG4B-221ENST00000483778 FSIP2Q5CZC0 6907 aa9.57□□□□□ -0.88
ATG4B-221ENST00000483778 C20orf202A1L168 122 aa9.57□□□□□ -0.88
ATG4B-221ENST00000483778 LORP23490 312 aaPredicted RBP9.57□□□□□ -0.88
ATG4B-221ENST00000483778 KRTAP10-6P60371 365 aaPredicted RBP9.57□□□□□ -0.88
ATG4B-221ENST00000483778 COPS9Q8WXC6 57 aa9.57□□□□□ -0.88
ATG4B-221ENST00000483778 TRAV13-2A0A0B4J235 113 aa9.55□□□□□ -0.88
ATG4B-221ENST00000483778 A4D1N5 150 aa9.55□□□□□ -0.88
ATG4B-221ENST00000483778 LINC00575Q6W349 94 aa9.53□□□□□ -0.88
ATG4B-221ENST00000483778 CFC1BP0CG36 223 aa9.51□□□□□ -0.89
ATG4B-221ENST00000483778 NHP2Q9NX24 153 aaKnown RBP9.51□□□□□ -0.89
ATG4B-221ENST00000483778 FLGP20930 4061 aaPredicted RBP9.49□□□□□ -0.89
ATG4B-221ENST00000483778 TCL1BO95988 128 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms