RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 TRAV23DV6A0A075B6W5 121 aa7.6□□□□□ -1.19
CTDSP1-208ENST00000482272 E9PLD3 99 aa7.6□□□□□ -1.19
CTDSP1-208ENST00000482272 HINT1P49773 126 aaPredicted RBP7.6□□□□□ -1.19
CTDSP1-208ENST00000482272 NPC2P61916 151 aa7.6□□□□□ -1.19
CTDSP1-208ENST00000482272 RPS29P62273 56 aaKnown RBP7.6□□□□□ -1.19
CTDSP1-208ENST00000482272 ZNF73O43830 326 aaPredicted RBP7.59□□□□□ -1.19
CTDSP1-208ENST00000482272 ADAMTSL4-AS1Q5T5F5 129 aa7.59□□□□□ -1.19
CTDSP1-208ENST00000482272 KRTAP13-3Q3SY46 172 aa7.58□□□□□ -1.2
CTDSP1-208ENST00000482272 LCE2AQ5TA79 106 aaPredicted RBP7.58□□□□□ -1.2
CTDSP1-208ENST00000482272 SLC25A20O43772 301 aa7.57□□□□□ -1.2
CTDSP1-208ENST00000482272 C5orf52A6NGY3 159 aa7.56□□□□□ -1.2
CTDSP1-208ENST00000482272 SYS1-DBNDD2H3BUS1 97 aa7.56□□□□□ -1.2
CTDSP1-208ENST00000482272 C9orf153Q5TBE3 101 aa7.56□□□□□ -1.2
CTDSP1-208ENST00000482272 Q8N377 158 aa7.56□□□□□ -1.2
CTDSP1-208ENST00000482272 OR13C6PQ8NH95 151 aa7.55□□□□□ -1.2
CTDSP1-208ENST00000482272 SPANXCQ9NY87 97 aa7.55□□□□□ -1.2
CTDSP1-208ENST00000482272 ASB16-AS1Q495Z4 193 aa7.54□□□□□ -1.2
CTDSP1-208ENST00000482272 LINC00308Q8TCZ7 52 aa7.54□□□□□ -1.2
CTDSP1-208ENST00000482272 LITAFQ99732 161 aa7.54□□□□□ -1.2
CTDSP1-208ENST00000482272 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
CTDSP1-208ENST00000482272 PET117Q6UWS5 81 aa7.53□□□□□ -1.2
CTDSP1-208ENST00000482272 ST20-AS1Q8NBB2 130 aa7.53□□□□□ -1.2
CTDSP1-208ENST00000482272 HIST1H2BKO60814 126 aa7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 TIMM17BO60830 172 aa7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 HIST1H2BJP06899 126 aa7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 HIST1H2BOP23527 126 aa7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 HIST1H2BBP33778 126 aa7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 HIST1H2BDP58876 126 aa7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 HIST1H2BCP62807 126 aa7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 HIST2H2BEQ16778 126 aa7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 LINC01545Q5VT33 79 aa7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 SLC25A34Q6PIV7 304 aa7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 HIST1H2BHQ93079 126 aa7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 HIST1H2BNQ99877 126 aa7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 HIST1H2BMQ99879 126 aa7.52□□□□□ -1.21
CTDSP1-208ENST00000482272 LINC00518Q8N0U6 118 aa7.51□□□□□ -1.21
CTDSP1-208ENST00000482272 TTTY13Q9BZ97 58 aa7.51□□□□□ -1.21
CTDSP1-208ENST00000482272 DHRS4-AS1Q9P1J3 65 aa7.51□□□□□ -1.21
CTDSP1-208ENST00000482272 ZNF815PA8K554 130 aa7.5□□□□□ -1.21
CTDSP1-208ENST00000482272 SPANXDQ9BXN6 97 aa7.5□□□□□ -1.21
CTDSP1-208ENST00000482272 KRTAP4-1Q9BYQ7 146 aa7.5□□□□□ -1.21
CTDSP1-208ENST00000482272 LAMTOR3Q9UHA4 124 aa7.49□□□□□ -1.21
CTDSP1-208ENST00000482272 SPRR1BP22528 89 aa7.48□□□□□ -1.21
CTDSP1-208ENST00000482272 COX7BP24311 80 aa7.47□□□□□ -1.21
CTDSP1-208ENST00000482272 FSIP2Q5CZC0 6907 aa7.46□□□□□ -1.21
CTDSP1-208ENST00000482272 C3orf79P0CE67 100 aa7.46□□□□□ -1.22
CTDSP1-208ENST00000482272 LIMD2Q9BT23 127 aa7.46□□□□□ -1.22
CTDSP1-208ENST00000482272 LINC01547P58512 204 aaPredicted RBP7.45□□□□□ -1.22
CTDSP1-208ENST00000482272 ELOF1P60002 83 aaKnown RBP7.45□□□□□ -1.22
CTDSP1-208ENST00000482272 TAL2Q16559 108 aa7.45□□□□□ -1.22
CTDSP1-208ENST00000482272 C6orf99Q4VX62 202 aa7.45□□□□□ -1.22
CTDSP1-208ENST00000482272 SCGB1D4Q6XE38 83 aa7.45□□□□□ -1.22
CTDSP1-208ENST00000482272 COPS9Q8WXC6 57 aa7.45□□□□□ -1.22
CTDSP1-208ENST00000482272 KRTDAPP60985 99 aa7.44□□□□□ -1.22
CTDSP1-208ENST00000482272 XP32Q5T750 250 aa7.44□□□□□ -1.22
CTDSP1-208ENST00000482272 HRCT1Q6UXD1 115 aa7.44□□□□□ -1.22
CTDSP1-208ENST00000482272 DEFB105AQ8NG35 78 aa7.43□□□□□ -1.22
CTDSP1-208ENST00000482272 TRBV7-6A0A0J9YX20 115 aa7.42□□□□□ -1.22
CTDSP1-208ENST00000482272 C20orf202A1L168 122 aa7.42□□□□□ -1.22
CTDSP1-208ENST00000482272 TEX49A0A1B0GTD5 131 aa7.41□□□□□ -1.22
CTDSP1-208ENST00000482272 IFITM1P13164 125 aa7.41□□□□□ -1.22
CTDSP1-208ENST00000482272 COA6Q5JTJ3 125 aaKnown RBP7.41□□□□□ -1.22
CTDSP1-208ENST00000482272 PRO1933Q9H354 126 aa7.41□□□□□ -1.22
CTDSP1-208ENST00000482272 A0A1B0GWB2 263 aa7.4□□□□□ -1.22
CTDSP1-208ENST00000482272 A6NDN8 102 aa7.4□□□□□ -1.22
CTDSP1-208ENST00000482272 CD164Q04900 197 aa7.4□□□□□ -1.22
CTDSP1-208ENST00000482272 Q1RN00 199 aa7.4□□□□□ -1.22
CTDSP1-208ENST00000482272 ANKRD39Q53RE8 183 aa7.4□□□□□ -1.22
CTDSP1-208ENST00000482272 Q6ZVH6 145 aa7.4□□□□□ -1.22
CTDSP1-208ENST00000482272 AKR1D1P51857 326 aa7.39□□□□□ -1.23
CTDSP1-208ENST00000482272 MUSTN1Q8IVN3 82 aa7.38□□□□□ -1.23
CTDSP1-208ENST00000482272 A4D1N5 150 aa7.37□□□□□ -1.23
CTDSP1-208ENST00000482272 H7C2G1 150 aa7.37□□□□□ -1.23
CTDSP1-208ENST00000482272 ATOH7Q8N100 152 aa7.37□□□□□ -1.23
CTDSP1-208ENST00000482272 TRAV13-2A0A0B4J235 113 aa7.35□□□□□ -1.23
CTDSP1-208ENST00000482272 C9orf92A6NGG3 77 aa7.35□□□□□ -1.23
CTDSP1-208ENST00000482272 SMIM29Q86T20 159 aa7.35□□□□□ -1.23
CTDSP1-208ENST00000482272 PCP2Q8IVA1 136 aa7.35□□□□□ -1.23
CTDSP1-208ENST00000482272 NHP2Q9NX24 153 aaKnown RBP7.35□□□□□ -1.23
CTDSP1-208ENST00000482272 IGLV5-48A0A075B6I7 105 aa7.34□□□□□ -1.23
CTDSP1-208ENST00000482272 SNRPEP62304 92 aaKnown RBP7.34□□□□□ -1.23
CTDSP1-208ENST00000482272 A0A0G2JQZ4 141 aa7.33□□□□□ -1.24
CTDSP1-208ENST00000482272 Q5XG85 94 aa7.33□□□□□ -1.24
CTDSP1-208ENST00000482272 CRCT1Q9UGL9 99 aa7.33□□□□□ -1.24
CTDSP1-208ENST00000482272 PCOTHQ58A44 107 aa7.32□□□□□ -1.24
CTDSP1-208ENST00000482272 IGLV8-61A0A075B6I0 122 aa7.31□□□□□ -1.24
CTDSP1-208ENST00000482272 VAMP3Q15836 100 aa7.31□□□□□ -1.24
CTDSP1-208ENST00000482272 SMIM11BQ8TCY0 68 aa7.31□□□□□ -1.24
CTDSP1-208ENST00000482272 KRTAP19-2Q3LHN2 52 aa7.3□□□□□ -1.24
CTDSP1-208ENST00000482272 LCE2CQ5TA81 110 aa7.3□□□□□ -1.24
CTDSP1-208ENST00000482272 C1orf195Q5TG92 126 aa7.29□□□□□ -1.24
CTDSP1-208ENST00000482272 HSBP1L1C9JCN9 74 aa7.27□□□□□ -1.25
CTDSP1-208ENST00000482272 F8WEM9 126 aa7.27□□□□□ -1.25
CTDSP1-208ENST00000482272 TCL1BO95988 128 aa7.27□□□□□ -1.25
CTDSP1-208ENST00000482272 S100A1P23297 94 aa7.26□□□□□ -1.25
CTDSP1-208ENST00000482272 S100A2P29034 98 aa7.26□□□□□ -1.25
CTDSP1-208ENST00000482272 hADV29S1A0JD25 119 aa7.24□□□□□ -1.25
CTDSP1-208ENST00000482272 LCE2DQ5TA82 110 aaPredicted RBP7.24□□□□□ -1.25
CTDSP1-208ENST00000482272 LINC00575Q6W349 94 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms