RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 SERP1Q9Y6X1 66 aa5.37□□□□□ -1.55
USP54-212ENST00000480210 PKD1P98161 4303 aa5.37□□□□□ -1.55
USP54-212ENST00000480210 H0YGX0 51 aa5.36□□□□□ -1.55
USP54-212ENST00000480210 KIAA0087Q14695 138 aa5.36□□□□□ -1.55
USP54-212ENST00000480210 HECTD4Q9Y4D8 3996 aa5.35□□□□□ -1.55
USP54-212ENST00000480210 TRAV13-2A0A0B4J235 113 aa5.35□□□□□ -1.55
USP54-212ENST00000480210 LOC107984640A0A0U1RRK4 108 aa5.35□□□□□ -1.55
USP54-212ENST00000480210 SMIM1B2RUZ4 78 aa5.35□□□□□ -1.55
USP54-212ENST00000480210 H3BQ85 93 aa5.35□□□□□ -1.55
USP54-212ENST00000480210 COX7B2Q8TF08 81 aa5.35□□□□□ -1.55
USP54-212ENST00000480210 LINC00474Q9P2X8 69 aa5.35□□□□□ -1.55
USP54-212ENST00000480210 DNAH5Q8TE73 4624 aa5.35□□□□□ -1.55
USP54-212ENST00000480210 SMIM26A0A096LP01 95 aa5.34□□□□□ -1.55
USP54-212ENST00000480210 IGLV5-39A0A0G2JS06 123 aa5.34□□□□□ -1.55
USP54-212ENST00000480210 H7C2G1 150 aa5.34□□□□□ -1.55
USP54-212ENST00000480210 SLPIP03973 132 aa5.34□□□□□ -1.55
USP54-212ENST00000480210 TLX1NBP0CAT3 122 aa5.34□□□□□ -1.55
USP54-212ENST00000480210 TOMM7Q9P0U1 55 aa5.34□□□□□ -1.55
USP54-212ENST00000480210 NDUFA12Q9UI09 145 aa5.34□□□□□ -1.55
USP54-212ENST00000480210 DYNC1H1Q14204 4646 aaKnown RBP5.33□□□□□ -1.56
USP54-212ENST00000480210 JMJD7-PLA2G4BH0Y9G9 81 aa5.33□□□□□ -1.56
USP54-212ENST00000480210 CDK2AP2O75956 126 aa5.33□□□□□ -1.56
USP54-212ENST00000480210 BAALC-AS2P0C853 105 aa5.33□□□□□ -1.56
USP54-212ENST00000480210 Q6ZRU5 148 aa5.33□□□□□ -1.56
USP54-212ENST00000480210 KRTAP10-1P60331 282 aa5.32□□□□□ -1.56
USP54-212ENST00000480210 Q6ZSA8 131 aa5.32□□□□□ -1.56
USP54-212ENST00000480210 FAM236DA0A1B0GTK5 79 aa5.31□□□□□ -1.56
USP54-212ENST00000480210 EPM2AB3EWF7 344 aa5.31□□□□□ -1.56
USP54-212ENST00000480210 FAM236CP0DP71 79 aa5.31□□□□□ -1.56
USP54-212ENST00000480210 TSPEAR-AS2P59090 65 aa5.31□□□□□ -1.56
USP54-212ENST00000480210 COX17Q14061 63 aa5.31□□□□□ -1.56
USP54-212ENST00000480210 UNQ6190/PRO20217Q6UXQ8 127 aa5.31□□□□□ -1.56
USP54-212ENST00000480210 LITAFQ99732 161 aa5.31□□□□□ -1.56
USP54-212ENST00000480210 V9GYY9 64 aa5.31□□□□□ -1.56
USP54-212ENST00000480210 LRP1BQ9NZR2 4599 aa5.3□□□□□ -1.56
USP54-212ENST00000480210 GHRHP01286 108 aa5.3□□□□□ -1.56
USP54-212ENST00000480210 PFN2P35080 140 aa5.3□□□□□ -1.56
USP54-212ENST00000480210 RPL28P46779 137 aaKnown RBP5.3□□□□□ -1.56
USP54-212ENST00000480210 C6orf48Q9UBA6 75 aa5.3□□□□□ -1.56
USP54-212ENST00000480210 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
USP54-212ENST00000480210 EPPK1P58107 5090 aaKnown RBP5.29□□□□□ -1.56
USP54-212ENST00000480210 FUSP35637 526 aaKnown RBP eCLIP5.29□□□□□ -1.56
USP54-212ENST00000480210 PKHD1P08F94 4074 aa5.28□□□□□ -1.56
USP54-212ENST00000480210 TRAV7A0A075B6U4 112 aa5.28□□□□□ -1.56
USP54-212ENST00000480210 PDE6GP18545 87 aa5.28□□□□□ -1.56
USP54-212ENST00000480210 C10orf25Q5T742 122 aa5.28□□□□□ -1.56
USP54-212ENST00000480210 Q5XG85 94 aa5.28□□□□□ -1.56
USP54-212ENST00000480210 CLEC2BQ92478 149 aa5.28□□□□□ -1.56
USP54-212ENST00000480210 OBSCN-AS1Q96MR7 158 aa5.28□□□□□ -1.56
USP54-212ENST00000480210 EIF4EBP3O60516 100 aaPredicted RBP5.27□□□□□ -1.57
USP54-212ENST00000480210 LINC00308Q8TCZ7 52 aa5.27□□□□□ -1.57
USP54-212ENST00000480210 SPACA4Q8TDM5 124 aa5.27□□□□□ -1.57
USP54-212ENST00000480210 ZNF625Q96I27 306 aaPredicted RBP5.27□□□□□ -1.57
USP54-212ENST00000480210 BIRC6Q9NR09 4857 aa5.27□□□□□ -1.57
USP54-212ENST00000480210 A0A096LNI7 61 aa5.26□□□□□ -1.57
USP54-212ENST00000480210 KLKP1Q107X0 134 aa5.26□□□□□ -1.57
USP54-212ENST00000480210 Q6ZRP5 223 aa5.26□□□□□ -1.57
USP54-212ENST00000480210 SMCR5Q8TEV8 140 aa5.26□□□□□ -1.57
USP54-212ENST00000480210 UBL5Q9BZL1 73 aa5.26□□□□□ -1.57
USP54-212ENST00000480210 PLAC8Q9NZF1 115 aa5.26□□□□□ -1.57
USP54-212ENST00000480210 FAM30AQ9NZY2 134 aa5.26□□□□□ -1.57
USP54-212ENST00000480210 A0A087WYN8 130 aa5.25□□□□□ -1.57
USP54-212ENST00000480210 IGKV2-24A0A0C4DH68 120 aa5.25□□□□□ -1.57
USP54-212ENST00000480210 ERC2-IT1O76042 136 aa5.25□□□□□ -1.57
USP54-212ENST00000480210 HRCT1Q6UXD1 115 aa5.25□□□□□ -1.57
USP54-212ENST00000480210 CIRBP-AS1Q8TBR5 109 aa5.25□□□□□ -1.57
USP54-212ENST00000480210 PLA2G2DQ9UNK4 145 aa5.25□□□□□ -1.57
USP54-212ENST00000480210 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.25□□□□□ -1.57
USP54-212ENST00000480210 CCKP06307 115 aa5.24□□□□□ -1.57
USP54-212ENST00000480210 SEC61GP60059 68 aa5.24□□□□□ -1.57
USP54-212ENST00000480210 C4orf26Q17RF5 130 aa5.24□□□□□ -1.57
USP54-212ENST00000480210 C9orf116Q5BN46 136 aaPredicted RBP5.24□□□□□ -1.57
USP54-212ENST00000480210 SCXQ7RTU7 201 aa5.24□□□□□ -1.57
USP54-212ENST00000480210 FAM229AH3BQW9 127 aa5.23□□□□□ -1.57
USP54-212ENST00000480210 TMEM256-PLSCR3K7ERE1 68 aa5.23□□□□□ -1.57
USP54-212ENST00000480210 LINC00158P58513 81 aa5.23□□□□□ -1.57
USP54-212ENST00000480210 C1orf195Q5TG92 126 aa5.23□□□□□ -1.57
USP54-212ENST00000480210 C7orf33Q8WU49 177 aa5.23□□□□□ -1.57
USP54-212ENST00000480210 ORMDL1Q9P0S3 153 aa5.23□□□□□ -1.57
USP54-212ENST00000480210 CHTF8P0CG12 524 aa5.22□□□□□ -1.57
USP54-212ENST00000480210 DSCR8Q96T75 97 aa5.22□□□□□ -1.57
USP54-212ENST00000480210 APOBP04114 4563 aaKnown RBP5.22□□□□□ -1.57
USP54-212ENST00000480210 PANO1I0J062 215 aa5.21□□□□□ -1.58
USP54-212ENST00000480210 PLA2G1BP04054 148 aaKnown RBP5.21□□□□□ -1.58
USP54-212ENST00000480210 C9orf129Q5T035 196 aaKnown RBP5.21□□□□□ -1.58
USP54-212ENST00000480210 ADAMTSL4-AS1Q5T5F5 129 aa5.21□□□□□ -1.58
USP54-212ENST00000480210 Q8N1X5 172 aa5.21□□□□□ -1.58
USP54-212ENST00000480210 RYR1P21817 5038 aa5.21□□□□□ -1.58
USP54-212ENST00000480210 IGLV5-37A0A075B6J1 123 aa5.2□□□□□ -1.58
USP54-212ENST00000480210 A0A1W2PNN7 141 aa5.2□□□□□ -1.58
USP54-212ENST00000480210 CXCL6P80162 114 aa5.2□□□□□ -1.58
USP54-212ENST00000480210 SND1-IT1Q9HBX3 110 aa5.2□□□□□ -1.58
USP54-212ENST00000480210 MIR7-3HGQ8N6C7 128 aa5.19□□□□□ -1.58
USP54-212ENST00000480210 XAGE1AQ9HD64 81 aa5.19□□□□□ -1.58
USP54-212ENST00000480210 C4orf48Q5BLP8 95 aa5.18□□□□□ -1.58
USP54-212ENST00000480210 LINC00528Q8N1L1 170 aa5.18□□□□□ -1.58
USP54-212ENST00000480210 NKAPP1Q8N9T2 125 aa5.18□□□□□ -1.58
USP54-212ENST00000480210 LINC00846Q9NV44 126 aa5.18□□□□□ -1.58
USP54-212ENST00000480210 C22orf24Q9Y442 160 aa5.18□□□□□ -1.58
USP54-212ENST00000480210 KIAA1109Q2LD37 5005 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms