RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 SOSTDC1Q6X4U4 206 aa3.74□□□□□ -1.81
FN1-220ENST00000480024 Q8N377 158 aa3.74□□□□□ -1.81
FN1-220ENST00000480024 A0A0J9YXY3 114 aa3.73□□□□□ -1.81
FN1-220ENST00000480024 SLC25A20O43772 301 aa3.73□□□□□ -1.81
FN1-220ENST00000480024 ZNF73O43830 326 aaPredicted RBP3.73□□□□□ -1.81
FN1-220ENST00000480024 EIF4EBP3O60516 100 aaPredicted RBP3.73□□□□□ -1.81
FN1-220ENST00000480024 RPS29P62273 56 aaKnown RBP3.73□□□□□ -1.81
FN1-220ENST00000480024 JOSD1Q15040 202 aaPredicted RBP3.73□□□□□ -1.81
FN1-220ENST00000480024 ADAMTSL4-AS1Q5T5F5 129 aa3.73□□□□□ -1.81
FN1-220ENST00000480024 SSBP3-AS1Q7Z2R9 100 aa3.73□□□□□ -1.81
FN1-220ENST00000480024 ST20-AS1Q8NBB2 130 aa3.73□□□□□ -1.81
FN1-220ENST00000480024 KRTAP4-1Q9BYQ7 146 aa3.73□□□□□ -1.81
FN1-220ENST00000480024 FSIP2Q5CZC0 6907 aa3.72□□□□□ -1.81
FN1-220ENST00000480024 SEC61BP60468 96 aaKnown RBP3.72□□□□□ -1.81
FN1-220ENST00000480024 E9PLD3 99 aa3.71□□□□□ -1.82
FN1-220ENST00000480024 LINC01547P58512 204 aaPredicted RBP3.71□□□□□ -1.82
FN1-220ENST00000480024 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
FN1-220ENST00000480024 LCE2BO14633 110 aa3.7□□□□□ -1.82
FN1-220ENST00000480024 HINT1P49773 126 aaPredicted RBP3.7□□□□□ -1.82
FN1-220ENST00000480024 XP32Q5T750 250 aa3.7□□□□□ -1.82
FN1-220ENST00000480024 HRCT1Q6UXD1 115 aa3.7□□□□□ -1.82
FN1-220ENST00000480024 OR13C6PQ8NH95 151 aa3.7□□□□□ -1.82
FN1-220ENST00000480024 LINC00308Q8TCZ7 52 aa3.7□□□□□ -1.82
FN1-220ENST00000480024 LITAFQ99732 161 aa3.7□□□□□ -1.82
FN1-220ENST00000480024 SPANXCQ9NY87 97 aa3.7□□□□□ -1.82
FN1-220ENST00000480024 COLCA2A8K830 154 aa3.69□□□□□ -1.82
FN1-220ENST00000480024 SYS1-DBNDD2H3BUS1 97 aa3.69□□□□□ -1.82
FN1-220ENST00000480024 TTTY13Q9BZ97 58 aa3.69□□□□□ -1.82
FN1-220ENST00000480024 CBY1Q9Y3M2 126 aa3.69□□□□□ -1.82
FN1-220ENST00000480024 ZNF815PA8K554 130 aa3.68□□□□□ -1.82
FN1-220ENST00000480024 SLC25A34Q6PIV7 304 aa3.68□□□□□ -1.82
FN1-220ENST00000480024 SLC7A5P1Q8MH63 180 aa3.68□□□□□ -1.82
FN1-220ENST00000480024 SPANXDQ9BXN6 97 aa3.68□□□□□ -1.82
FN1-220ENST00000480024 DHRS4-AS1Q9P1J3 65 aa3.68□□□□□ -1.82
FN1-220ENST00000480024 C9orf92A6NGG3 77 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 C5orf52A6NGY3 159 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 HIST1H2BKO60814 126 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 TIMM17BO60830 172 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 HIST1H2BJP06899 126 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 SPRR1BP22528 89 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 HIST1H2BOP23527 126 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 COX7BP24311 80 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 HIST1H2BBP33778 126 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 HIST1H2BDP58876 126 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 HIST1H2BCP62807 126 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 HIST2H2BEQ16778 126 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 Q1RN00 199 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.67□□□□□ -1.82
FN1-220ENST00000480024 HIST1H2BHQ93079 126 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 HIST1H2BNQ99877 126 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 HIST1H2BMQ99879 126 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 LIMD2Q9BT23 127 aa3.67□□□□□ -1.82
FN1-220ENST00000480024 ELOF1P60002 83 aaKnown RBP3.66□□□□□ -1.82
FN1-220ENST00000480024 C6orf99Q4VX62 202 aa3.66□□□□□ -1.82
FN1-220ENST00000480024 LINC01545Q5VT33 79 aa3.66□□□□□ -1.82
FN1-220ENST00000480024 DEFB105AQ8NG35 78 aa3.66□□□□□ -1.82
FN1-220ENST00000480024 LAMTOR3Q9UHA4 124 aa3.66□□□□□ -1.82
FN1-220ENST00000480024 H7C2G1 150 aa3.65□□□□□ -1.83
FN1-220ENST00000480024 TAL2Q16559 108 aa3.65□□□□□ -1.83
FN1-220ENST00000480024 PCOTHQ58A44 107 aa3.65□□□□□ -1.83
FN1-220ENST00000480024 PET117Q6UWS5 81 aa3.65□□□□□ -1.83
FN1-220ENST00000480024 IGLV8-61A0A075B6I0 122 aa3.64□□□□□ -1.83
FN1-220ENST00000480024 C3orf79P0CE67 100 aa3.64□□□□□ -1.83
FN1-220ENST00000480024 KRTDAPP60985 99 aa3.64□□□□□ -1.83
FN1-220ENST00000480024 SCGB1D4Q6XE38 83 aa3.64□□□□□ -1.83
FN1-220ENST00000480024 LINC00518Q8N0U6 118 aa3.64□□□□□ -1.83
FN1-220ENST00000480024 A0A0G2JQZ4 141 aa3.63□□□□□ -1.83
FN1-220ENST00000480024 TEX49A0A1B0GTD5 131 aa3.63□□□□□ -1.83
FN1-220ENST00000480024 LCE2CQ5TA81 110 aa3.63□□□□□ -1.83
FN1-220ENST00000480024 PRO1933Q9H354 126 aa3.63□□□□□ -1.83
FN1-220ENST00000480024 A6NDN8 102 aa3.62□□□□□ -1.83
FN1-220ENST00000480024 CD164Q04900 197 aa3.62□□□□□ -1.83
FN1-220ENST00000480024 KRTAP19-2Q3LHN2 52 aa3.62□□□□□ -1.83
FN1-220ENST00000480024 ANKRD39Q53RE8 183 aa3.62□□□□□ -1.83
FN1-220ENST00000480024 ATOH7Q8N100 152 aa3.62□□□□□ -1.83
FN1-220ENST00000480024 TRBV7-6A0A0J9YX20 115 aa3.61□□□□□ -1.83
FN1-220ENST00000480024 A0A1B0GWB2 263 aa3.61□□□□□ -1.83
FN1-220ENST00000480024 C20orf202A1L168 122 aa3.61□□□□□ -1.83
FN1-220ENST00000480024 AKR1D1P51857 326 aa3.61□□□□□ -1.83
FN1-220ENST00000480024 SMIM29Q86T20 159 aa3.61□□□□□ -1.83
FN1-220ENST00000480024 COPS9Q8WXC6 57 aa3.61□□□□□ -1.83
FN1-220ENST00000480024 IGLV5-48A0A075B6I7 105 aa3.6□□□□□ -1.83
FN1-220ENST00000480024 IFITM1P13164 125 aa3.6□□□□□ -1.83
FN1-220ENST00000480024 MT1HP80294 61 aa3.6□□□□□ -1.83
FN1-220ENST00000480024 C1orf195Q5TG92 126 aa3.6□□□□□ -1.83
FN1-220ENST00000480024 PCP2Q8IVA1 136 aa3.6□□□□□ -1.83
FN1-220ENST00000480024 MUSTN1Q8IVN3 82 aa3.6□□□□□ -1.83
FN1-220ENST00000480024 SMCPP49901 116 aaPredicted RBP3.59□□□□□ -1.83
FN1-220ENST00000480024 COA6Q5JTJ3 125 aaKnown RBP3.59□□□□□ -1.83
FN1-220ENST00000480024 Q5XG85 94 aa3.59□□□□□ -1.83
FN1-220ENST00000480024 SMIM11BQ8TCY0 68 aa3.59□□□□□ -1.83
FN1-220ENST00000480024 TRAV13-2A0A0B4J235 113 aa3.58□□□□□ -1.84
FN1-220ENST00000480024 A4D1N5 150 aa3.58□□□□□ -1.84
FN1-220ENST00000480024 CFC1BP0CG36 223 aa3.58□□□□□ -1.84
FN1-220ENST00000480024 Q6ZVH6 145 aa3.58□□□□□ -1.84
FN1-220ENST00000480024 NHP2Q9NX24 153 aaKnown RBP3.58□□□□□ -1.84
FN1-220ENST00000480024 CRCT1Q9UGL9 99 aa3.58□□□□□ -1.84
FN1-220ENST00000480024 F8WEM9 126 aa3.57□□□□□ -1.84
FN1-220ENST00000480024 RPL37P61927 97 aaKnown RBP3.57□□□□□ -1.84
FN1-220ENST00000480024 TCL1BO95988 128 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 1328.7 ms