RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 APLNQ9ULZ1 77 aa8.42□□□□□ -1.06
SEC13-216ENST00000479868 RBM3P98179 157 aaKnown RBP8.42□□□□□ -1.06
SEC13-216ENST00000479868 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.42□□□□□ -1.06
SEC13-216ENST00000479868 KCNQ1DNQ9H478 68 aa8.41□□□□□ -1.06
SEC13-216ENST00000479868 DYNC2H1Q8NCM8 4307 aaKnown RBP8.41□□□□□ -1.06
SEC13-216ENST00000479868 KRTAP7-1Q8IUC3 87 aa8.4□□□□□ -1.06
SEC13-216ENST00000479868 PLA2G2DQ9UNK4 145 aa8.4□□□□□ -1.06
SEC13-216ENST00000479868 LOC107984640A0A0U1RRK4 108 aa8.4□□□□□ -1.07
SEC13-216ENST00000479868 Q6ZQT0 140 aa8.4□□□□□ -1.07
SEC13-216ENST00000479868 UBE2DNLQ8IWF7 75 aa8.4□□□□□ -1.07
SEC13-216ENST00000479868 RPL37AP8A6NKH3 93 aa8.39□□□□□ -1.07
SEC13-216ENST00000479868 RPS28P62857 69 aaKnown RBP8.39□□□□□ -1.07
SEC13-216ENST00000479868 FAM236AA0A1B0GUQ0 79 aa8.38□□□□□ -1.07
SEC13-216ENST00000479868 FAM236BA0A1B0GV22 79 aa8.38□□□□□ -1.07
SEC13-216ENST00000479868 H3BQ85 93 aa8.38□□□□□ -1.07
SEC13-216ENST00000479868 LOC110117498A0A087WWA1 95 aa8.37□□□□□ -1.07
SEC13-216ENST00000479868 IGKV3D-7A0A0C4DH55 119 aa8.37□□□□□ -1.07
SEC13-216ENST00000479868 IGLV5-37A0A075B6J1 123 aa8.37□□□□□ -1.07
SEC13-216ENST00000479868 M0R2N4 97 aa8.37□□□□□ -1.07
SEC13-216ENST00000479868 Q6JHZ5 121 aa8.37□□□□□ -1.07
SEC13-216ENST00000479868 IGLV1-50A0A075B6I6 118 aa8.36□□□□□ -1.07
SEC13-216ENST00000479868 PLECQ15149 4684 aaKnown RBP8.36□□□□□ -1.07
SEC13-216ENST00000479868 DSCR8Q96T75 97 aa8.35□□□□□ -1.07
SEC13-216ENST00000479868 PSCAO43653 123 aa8.35□□□□□ -1.07
SEC13-216ENST00000479868 PRKDCP78527 4128 aaKnown RBP8.34□□□□□ -1.07
SEC13-216ENST00000479868 GHRHP01286 108 aa8.34□□□□□ -1.07
SEC13-216ENST00000479868 KRTAP4-16G5E9R7 235 aaPredicted RBP8.34□□□□□ -1.07
SEC13-216ENST00000479868 MRPL55Q7Z7F7 128 aaKnown RBP8.33□□□□□ -1.08
SEC13-216ENST00000479868 TRBV7-4A0A0J9YYF1 115 aa8.33□□□□□ -1.08
SEC13-216ENST00000479868 PRYO14603 147 aa8.32□□□□□ -1.08
SEC13-216ENST00000479868 SPRR1AP35321 89 aa8.32□□□□□ -1.08
SEC13-216ENST00000479868 Q6ZRX8 168 aa8.32□□□□□ -1.08
SEC13-216ENST00000479868 CNBPP62633 177 aaKnown RBP8.32□□□□□ -1.08
SEC13-216ENST00000479868 Q9BRP9 147 aa8.32□□□□□ -1.08
SEC13-216ENST00000479868 A0A096LNI7 61 aa8.31□□□□□ -1.08
SEC13-216ENST00000479868 UBL5Q9BZL1 73 aa8.31□□□□□ -1.08
SEC13-216ENST00000479868 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.3□□□□□ -1.08
SEC13-216ENST00000479868 A0A087WVE0 104 aa8.3□□□□□ -1.08
SEC13-216ENST00000479868 PDE6GP18545 87 aa8.3□□□□□ -1.08
SEC13-216ENST00000479868 V9GYY9 64 aa8.3□□□□□ -1.08
SEC13-216ENST00000479868 STARD9Q9P2P6 4700 aa8.3□□□□□ -1.08
SEC13-216ENST00000479868 IGKV2-24A0A0C4DH68 120 aa8.3□□□□□ -1.08
SEC13-216ENST00000479868 NUPR2A6NF83 97 aa8.3□□□□□ -1.08
SEC13-216ENST00000479868 ETDCA0A1B0GVM5 59 aa8.29□□□□□ -1.08
SEC13-216ENST00000479868 DEFB105AQ8NG35 78 aa8.29□□□□□ -1.08
SEC13-216ENST00000479868 MEGF8Q7Z7M0 2845 aa8.29□□□□□ -1.08
SEC13-216ENST00000479868 HIST1H4AP62805 103 aaKnown RBP8.29□□□□□ -1.08
SEC13-216ENST00000479868 PRO0628Q9UI54 55 aa8.29□□□□□ -1.08
SEC13-216ENST00000479868 C16orf90A8MZG2 172 aa8.28□□□□□ -1.08
SEC13-216ENST00000479868 LINC01547P58512 204 aaPredicted RBP8.28□□□□□ -1.08
SEC13-216ENST00000479868 Q8N377 158 aa8.28□□□□□ -1.08
SEC13-216ENST00000479868 DHRS4-AS1Q9P1J3 65 aa8.28□□□□□ -1.08
SEC13-216ENST00000479868 NBDYA0A0U1RRE5 68 aa8.27□□□□□ -1.09
SEC13-216ENST00000479868 A0A1W2PNN7 141 aa8.27□□□□□ -1.09
SEC13-216ENST00000479868 ATP5EP2Q5VTU8 51 aa8.27□□□□□ -1.09
SEC13-216ENST00000479868 Q6ZVQ6 151 aa8.26□□□□□ -1.09
SEC13-216ENST00000479868 DNHD1Q96M86 4753 aa8.26□□□□□ -1.09
SEC13-216ENST00000479868 C3orf22Q8N5N4 141 aa8.26□□□□□ -1.09
SEC13-216ENST00000479868 ST20-AS1Q8NBB2 130 aa8.26□□□□□ -1.09
SEC13-216ENST00000479868 LRCOL1A6NCL2 159 aa8.25□□□□□ -1.09
SEC13-216ENST00000479868 ERC2-IT1O76042 136 aa8.25□□□□□ -1.09
SEC13-216ENST00000479868 C14orf177Q52M58 125 aa8.25□□□□□ -1.09
SEC13-216ENST00000479868 REG3GQ6UW15 175 aa8.25□□□□□ -1.09
SEC13-216ENST00000479868 C9orf153Q5TBE3 101 aa8.25□□□□□ -1.09
SEC13-216ENST00000479868 FAM19A1Q7Z5A9 133 aa8.25□□□□□ -1.09
SEC13-216ENST00000479868 CHTF8P0CG12 524 aa8.24□□□□□ -1.09
SEC13-216ENST00000479868 HRCT1Q6UXD1 115 aa8.24□□□□□ -1.09
SEC13-216ENST00000479868 Q6ZRN7 208 aaPredicted RBP8.24□□□□□ -1.09
SEC13-216ENST00000479868 UBE2BP63146 152 aa8.23□□□□□ -1.09
SEC13-216ENST00000479868 HAMPP81172 84 aa8.22□□□□□ -1.09
SEC13-216ENST00000479868 C4orf26Q17RF5 130 aa8.22□□□□□ -1.09
SEC13-216ENST00000479868 IGLV5-48A0A075B6I7 105 aa8.21□□□□□ -1.09
SEC13-216ENST00000479868 ATOX1O00244 68 aa8.21□□□□□ -1.09
SEC13-216ENST00000479868 UQCRQO14949 82 aa8.21□□□□□ -1.09
SEC13-216ENST00000479868 VPS13DQ5THJ4 4388 aa8.21□□□□□ -1.1
SEC13-216ENST00000479868 Q5XG85 94 aa8.2□□□□□ -1.1
SEC13-216ENST00000479868 C9orf163Q8N9P6 203 aa8.2□□□□□ -1.1
SEC13-216ENST00000479868 PRLHP81277 87 aa8.19□□□□□ -1.1
SEC13-216ENST00000479868 TNP2Q05952 138 aa8.19□□□□□ -1.1
SEC13-216ENST00000479868 PHF5AQ7RTV0 110 aaKnown RBP8.19□□□□□ -1.1
SEC13-216ENST00000479868 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
SEC13-216ENST00000479868 LINC00336Q6ZUF6 198 aa8.18□□□□□ -1.1
SEC13-216ENST00000479868 KMT2AQ03164 3969 aa8.18□□□□□ -1.1
SEC13-216ENST00000479868 CXCL6P80162 114 aa8.17□□□□□ -1.1
SEC13-216ENST00000479868 C3orf84H3BNL1 204 aa8.17□□□□□ -1.1
SEC13-216ENST00000479868 COX7CP15954 63 aa8.17□□□□□ -1.1
SEC13-216ENST00000479868 SCXQ7RTU7 201 aa8.17□□□□□ -1.1
SEC13-216ENST00000479868 PANO1I0J062 215 aa8.16□□□□□ -1.1
SEC13-216ENST00000479868 C1orf137Q5JT78 98 aa8.15□□□□□ -1.1
SEC13-216ENST00000479868 SMIM29Q86T20 159 aa8.15□□□□□ -1.1
SEC13-216ENST00000479868 SRRM2Q9UQ35 2752 aaKnown RBP8.15□□□□□ -1.11
SEC13-216ENST00000479868 A0A1W2PNM2 257 aa8.14□□□□□ -1.11
SEC13-216ENST00000479868 DPH3Q96FX2 82 aa8.14□□□□□ -1.11
SEC13-216ENST00000479868 PKIGQ9Y2B9 76 aa8.14□□□□□ -1.11
SEC13-216ENST00000479868 CRYGAP11844 174 aa8.14□□□□□ -1.11
SEC13-216ENST00000479868 HIGD2AQ9BW72 106 aa8.14□□□□□ -1.11
SEC13-216ENST00000479868 TMEM258P61165 79 aa8.13□□□□□ -1.11
SEC13-216ENST00000479868 SERP2Q8N6R1 65 aa8.13□□□□□ -1.11
SEC13-216ENST00000479868 HECTD4Q9Y4D8 3996 aa8.13□□□□□ -1.11
SEC13-216ENST00000479868 TGP01266 2768 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms