RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 SSBP3-AS1Q7Z2R9 100 aa12.27□□□□□ -0.45
MCF2L2-210ENST00000478652 COLCA2A8K830 154 aa12.26□□□□□ -0.45
MCF2L2-210ENST00000478652 ASB16-AS1Q495Z4 193 aa12.26□□□□□ -0.45
MCF2L2-210ENST00000478652 KRTAP4-1Q9BYQ7 146 aa12.26□□□□□ -0.45
MCF2L2-210ENST00000478652 RPS29P62273 56 aaKnown RBP12.25□□□□□ -0.45
MCF2L2-210ENST00000478652 SLC7A5P1Q8MH63 180 aa12.24□□□□□ -0.45
MCF2L2-210ENST00000478652 ST20-AS1Q8NBB2 130 aa12.24□□□□□ -0.45
MCF2L2-210ENST00000478652 E9PLD3 99 aa12.23□□□□□ -0.45
MCF2L2-210ENST00000478652 ZNF73O43830 326 aaPredicted RBP12.23□□□□□ -0.45
MCF2L2-210ENST00000478652 C9orf153Q5TBE3 101 aa12.21□□□□□ -0.45
MCF2L2-210ENST00000478652 JOSD1Q15040 202 aaPredicted RBP12.2□□□□□ -0.46
MCF2L2-210ENST00000478652 LITAFQ99732 161 aa12.2□□□□□ -0.46
MCF2L2-210ENST00000478652 SLC25A20O43772 301 aa12.18□□□□□ -0.46
MCF2L2-210ENST00000478652 SYS1-DBNDD2H3BUS1 97 aa12.16□□□□□ -0.46
MCF2L2-210ENST00000478652 LINC00308Q8TCZ7 52 aa12.16□□□□□ -0.46
MCF2L2-210ENST00000478652 SEC61BP60468 96 aaKnown RBP12.14□□□□□ -0.47
MCF2L2-210ENST00000478652 HIST1H2BKO60814 126 aa12.13□□□□□ -0.47
MCF2L2-210ENST00000478652 HIST1H2BJP06899 126 aa12.13□□□□□ -0.47
MCF2L2-210ENST00000478652 HIST1H2BOP23527 126 aa12.13□□□□□ -0.47
MCF2L2-210ENST00000478652 HIST1H2BBP33778 126 aa12.13□□□□□ -0.47
MCF2L2-210ENST00000478652 HIST1H2BDP58876 126 aa12.13□□□□□ -0.47
MCF2L2-210ENST00000478652 HIST1H2BCP62807 126 aa12.13□□□□□ -0.47
MCF2L2-210ENST00000478652 HIST2H2BEQ16778 126 aa12.13□□□□□ -0.47
MCF2L2-210ENST00000478652 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.13□□□□□ -0.47
MCF2L2-210ENST00000478652 HIST1H2BHQ93079 126 aa12.13□□□□□ -0.47
MCF2L2-210ENST00000478652 HIST1H2BNQ99877 126 aa12.13□□□□□ -0.47
MCF2L2-210ENST00000478652 HIST1H2BMQ99879 126 aa12.13□□□□□ -0.47
MCF2L2-210ENST00000478652 TTTY13Q9BZ97 58 aa12.13□□□□□ -0.47
MCF2L2-210ENST00000478652 SPANXCQ9NY87 97 aa12.13□□□□□ -0.47
MCF2L2-210ENST00000478652 XP32Q5T750 250 aa12.12□□□□□ -0.47
MCF2L2-210ENST00000478652 LINC01545Q5VT33 79 aa12.12□□□□□ -0.47
MCF2L2-210ENST00000478652 OR13C6PQ8NH95 151 aa12.11□□□□□ -0.47
MCF2L2-210ENST00000478652 TIMM17BO60830 172 aa12.1□□□□□ -0.47
MCF2L2-210ENST00000478652 SPRR1BP22528 89 aa12.1□□□□□ -0.47
MCF2L2-210ENST00000478652 C5orf52A6NGY3 159 aa12.09□□□□□ -0.47
MCF2L2-210ENST00000478652 HINT1P49773 126 aaPredicted RBP12.09□□□□□ -0.47
MCF2L2-210ENST00000478652 ZNF815PA8K554 130 aa12.08□□□□□ -0.48
MCF2L2-210ENST00000478652 CBY1Q9Y3M2 126 aa12.07□□□□□ -0.48
MCF2L2-210ENST00000478652 HRCT1Q6UXD1 115 aa12.06□□□□□ -0.48
MCF2L2-210ENST00000478652 SPANXDQ9BXN6 97 aa12.06□□□□□ -0.48
MCF2L2-210ENST00000478652 LINC01547P58512 204 aaPredicted RBP12.05□□□□□ -0.48
MCF2L2-210ENST00000478652 PET117Q6UWS5 81 aa12.05□□□□□ -0.48
MCF2L2-210ENST00000478652 ELOF1P60002 83 aaKnown RBP12.04□□□□□ -0.48
MCF2L2-210ENST00000478652 DHRS4-AS1Q9P1J3 65 aa12.04□□□□□ -0.48
MCF2L2-210ENST00000478652 KRTAP9-6A0A140TA67 174 aa12.03□□□□□ -0.48
MCF2L2-210ENST00000478652 C3orf79P0CE67 100 aa12.03□□□□□ -0.48
MCF2L2-210ENST00000478652 C6orf99Q4VX62 202 aa12.03□□□□□ -0.48
MCF2L2-210ENST00000478652 COX7BP24311 80 aa12.02□□□□□ -0.49
MCF2L2-210ENST00000478652 Q1RN00 199 aa11.99□□□□□ -0.49
MCF2L2-210ENST00000478652 SLC25A34Q6PIV7 304 aa11.99□□□□□ -0.49
MCF2L2-210ENST00000478652 LIMD2Q9BT23 127 aa11.99□□□□□ -0.49
MCF2L2-210ENST00000478652 LAMTOR3Q9UHA4 124 aa11.99□□□□□ -0.49
MCF2L2-210ENST00000478652 LINC00518Q8N0U6 118 aa11.97□□□□□ -0.49
MCF2L2-210ENST00000478652 DEFB105AQ8NG35 78 aa11.97□□□□□ -0.49
MCF2L2-210ENST00000478652 C9orf92A6NGG3 77 aa11.96□□□□□ -0.49
MCF2L2-210ENST00000478652 LCE2CQ5TA81 110 aa11.96□□□□□ -0.49
MCF2L2-210ENST00000478652 KRTDAPP60985 99 aa11.95□□□□□ -0.5
MCF2L2-210ENST00000478652 TAL2Q16559 108 aa11.95□□□□□ -0.5
MCF2L2-210ENST00000478652 ANKRD39Q53RE8 183 aa11.95□□□□□ -0.5
MCF2L2-210ENST00000478652 KRTAP19-2Q3LHN2 52 aa11.93□□□□□ -0.5
MCF2L2-210ENST00000478652 SCGB1D4Q6XE38 83 aa11.93□□□□□ -0.5
MCF2L2-210ENST00000478652 SMIM29Q86T20 159 aa11.93□□□□□ -0.5
MCF2L2-210ENST00000478652 PCOTHQ58A44 107 aa11.92□□□□□ -0.5
MCF2L2-210ENST00000478652 A0A0G2JQZ4 141 aa11.91□□□□□ -0.5
MCF2L2-210ENST00000478652 TEX49A0A1B0GTD5 131 aa11.91□□□□□ -0.5
MCF2L2-210ENST00000478652 H7C2G1 150 aa11.91□□□□□ -0.5
MCF2L2-210ENST00000478652 COA6Q5JTJ3 125 aaKnown RBP11.91□□□□□ -0.5
MCF2L2-210ENST00000478652 CD164Q04900 197 aa11.9□□□□□ -0.5
MCF2L2-210ENST00000478652 ATOH7Q8N100 152 aa11.9□□□□□ -0.5
MCF2L2-210ENST00000478652 PRO1933Q9H354 126 aa11.9□□□□□ -0.5
MCF2L2-210ENST00000478652 TRBV7-6A0A0J9YX20 115 aa11.89□□□□□ -0.51
MCF2L2-210ENST00000478652 IGLV5-48A0A075B6I7 105 aa11.87□□□□□ -0.51
MCF2L2-210ENST00000478652 A0A1B0GWB2 263 aa11.87□□□□□ -0.51
MCF2L2-210ENST00000478652 PCP2Q8IVA1 136 aa11.87□□□□□ -0.51
MCF2L2-210ENST00000478652 IGLV8-61A0A075B6I0 122 aa11.86□□□□□ -0.51
MCF2L2-210ENST00000478652 A6NDN8 102 aa11.86□□□□□ -0.51
MCF2L2-210ENST00000478652 IFITM1P13164 125 aa11.86□□□□□ -0.51
MCF2L2-210ENST00000478652 MUSTN1Q8IVN3 82 aa11.86□□□□□ -0.51
MCF2L2-210ENST00000478652 LCE2DQ5TA82 110 aaPredicted RBP11.85□□□□□ -0.51
MCF2L2-210ENST00000478652 C20orf202A1L168 122 aa11.83□□□□□ -0.52
MCF2L2-210ENST00000478652 AKR1D1P51857 326 aa11.82□□□□□ -0.52
MCF2L2-210ENST00000478652 C1orf195Q5TG92 126 aa11.82□□□□□ -0.52
MCF2L2-210ENST00000478652 Q5XG85 94 aa11.82□□□□□ -0.52
MCF2L2-210ENST00000478652 COPS9Q8WXC6 57 aa11.82□□□□□ -0.52
MCF2L2-210ENST00000478652 MT1HP80294 61 aa11.81□□□□□ -0.52
MCF2L2-210ENST00000478652 Q6ZVH6 145 aa11.81□□□□□ -0.52
MCF2L2-210ENST00000478652 SMIM11BQ8TCY0 68 aa11.8□□□□□ -0.52
MCF2L2-210ENST00000478652 TRAV13-2A0A0B4J235 113 aa11.75□□□□□ -0.53
MCF2L2-210ENST00000478652 A4D1N5 150 aa11.75□□□□□ -0.53
MCF2L2-210ENST00000478652 NHP2Q9NX24 153 aaKnown RBP11.72□□□□□ -0.53
MCF2L2-210ENST00000478652 RPL37P61927 97 aaKnown RBP11.71□□□□□ -0.53
MCF2L2-210ENST00000478652 LINC00575Q6W349 94 aa11.67□□□□□ -0.54
MCF2L2-210ENST00000478652 SNRPEP62304 92 aaKnown RBP11.66□□□□□ -0.54
MCF2L2-210ENST00000478652 CRCT1Q9UGL9 99 aa11.65□□□□□ -0.54
MCF2L2-210ENST00000478652 F8WEM9 126 aa11.64□□□□□ -0.55
MCF2L2-210ENST00000478652 TCL1BO95988 128 aa11.64□□□□□ -0.55
MCF2L2-210ENST00000478652 Q6ZQY7 126 aa11.64□□□□□ -0.55
MCF2L2-210ENST00000478652 HIST3H2BBQ8N257 126 aa11.64□□□□□ -0.55
MCF2L2-210ENST00000478652 HIST1H2BLQ99880 126 aa11.63□□□□□ -0.55
MCF2L2-210ENST00000478652 CFC1BP0CG36 223 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms