RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 SYCNQ0VAF6 134 aa11.91□□□□□ -0.5
CCM2-209ENST00000477605 DPH3Q96FX2 82 aa11.9□□□□□ -0.5
CCM2-209ENST00000477605 OXLD1Q5BKU9 147 aa11.9□□□□□ -0.51
CCM2-209ENST00000477605 Q6ZRP5 223 aa11.9□□□□□ -0.51
CCM2-209ENST00000477605 KCNQ1DNQ9H478 68 aa11.88□□□□□ -0.51
CCM2-209ENST00000477605 IGKV2D-24A0A075B6R9 120 aa11.88□□□□□ -0.51
CCM2-209ENST00000477605 DEFB131BA0A096LNP1 70 aa11.87□□□□□ -0.51
CCM2-209ENST00000477605 TLX1NBP0CAT3 122 aa11.86□□□□□ -0.51
CCM2-209ENST00000477605 DNAH10OSP0CZ25 163 aa11.86□□□□□ -0.51
CCM2-209ENST00000477605 PLA2G2DQ9UNK4 145 aa11.86□□□□□ -0.51
CCM2-209ENST00000477605 NKAPP1Q8N9T2 125 aa11.85□□□□□ -0.51
CCM2-209ENST00000477605 C11orf45Q8TAV5 145 aa11.85□□□□□ -0.51
CCM2-209ENST00000477605 C20orf197Q8N268 126 aa11.84□□□□□ -0.51
CCM2-209ENST00000477605 MEGF8Q7Z7M0 2845 aa11.83□□□□□ -0.52
CCM2-209ENST00000477605 FAM19A5Q7Z5A7 132 aaPredicted RBP11.82□□□□□ -0.52
CCM2-209ENST00000477605 NOTCH1P46531 2555 aa11.81□□□□□ -0.52
CCM2-209ENST00000477605 TRAV10A0A0B4J240 114 aa11.81□□□□□ -0.52
CCM2-209ENST00000477605 KLKP1Q107X0 134 aa11.8□□□□□ -0.52
CCM2-209ENST00000477605 C7orf33Q8WU49 177 aa11.8□□□□□ -0.52
CCM2-209ENST00000477605 IGLV5-37A0A075B6J1 123 aa11.8□□□□□ -0.52
CCM2-209ENST00000477605 A0A1B0GW54 56 aa11.8□□□□□ -0.52
CCM2-209ENST00000477605 DHRS4-AS1Q9P1J3 65 aa11.8□□□□□ -0.52
CCM2-209ENST00000477605 SERTAD4-AS1Q5TG53 156 aa11.77□□□□□ -0.52
CCM2-209ENST00000477605 IGLV5-48A0A075B6I7 105 aa11.77□□□□□ -0.53
CCM2-209ENST00000477605 PRYO14603 147 aa11.77□□□□□ -0.53
CCM2-209ENST00000477605 MRAPQ8TCY5 172 aa11.77□□□□□ -0.53
CCM2-209ENST00000477605 NREPQ16612 68 aa11.76□□□□□ -0.53
CCM2-209ENST00000477605 Q8N377 158 aa11.75□□□□□ -0.53
CCM2-209ENST00000477605 FAM236DA0A1B0GTK5 79 aa11.74□□□□□ -0.53
CCM2-209ENST00000477605 H7BZZ5 65 aa11.74□□□□□ -0.53
CCM2-209ENST00000477605 FAM236CP0DP71 79 aa11.74□□□□□ -0.53
CCM2-209ENST00000477605 RMI2Q96E14 147 aa11.74□□□□□ -0.53
CCM2-209ENST00000477605 Q6ZRX8 168 aa11.74□□□□□ -0.53
CCM2-209ENST00000477605 NDUFC1O43677 76 aa11.73□□□□□ -0.53
CCM2-209ENST00000477605 SPRR1AP35321 89 aa11.73□□□□□ -0.53
CCM2-209ENST00000477605 SCXQ7RTU7 201 aa11.73□□□□□ -0.53
CCM2-209ENST00000477605 IGLV1-50A0A075B6I6 118 aa11.72□□□□□ -0.53
CCM2-209ENST00000477605 KRTAP4-16G5E9R7 235 aaPredicted RBP11.72□□□□□ -0.53
CCM2-209ENST00000477605 ERC2-IT1O76042 136 aa11.72□□□□□ -0.53
CCM2-209ENST00000477605 PRKDCP78527 4128 aaKnown RBP11.71□□□□□ -0.53
CCM2-209ENST00000477605 BPY2O14599 106 aa11.7□□□□□ -0.54
CCM2-209ENST00000477605 IGKV4-1P06312 121 aa11.69□□□□□ -0.54
CCM2-209ENST00000477605 DEFB105AQ8NG35 78 aa11.69□□□□□ -0.54
CCM2-209ENST00000477605 LINC00588Q9Y4M8 146 aa11.69□□□□□ -0.54
CCM2-209ENST00000477605 ETDCA0A1B0GVM5 59 aa11.69□□□□□ -0.54
CCM2-209ENST00000477605 OXTP01178 125 aa11.69□□□□□ -0.54
CCM2-209ENST00000477605 FUSP35637 526 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCM2-209ENST00000477605 TM2D3Q9BRN9 247 aa11.67□□□□□ -0.54
CCM2-209ENST00000477605 SERP1Q9Y6X1 66 aa11.67□□□□□ -0.54
CCM2-209ENST00000477605 EPM2AB3EWF7 344 aa11.67□□□□□ -0.54
CCM2-209ENST00000477605 TNP2Q05952 138 aa11.66□□□□□ -0.54
CCM2-209ENST00000477605 Q9BRP9 147 aa11.66□□□□□ -0.54
CCM2-209ENST00000477605 DNAH3Q8TD57 4116 aa11.64□□□□□ -0.55
CCM2-209ENST00000477605 RPL37AP8A6NKH3 93 aa11.64□□□□□ -0.55
CCM2-209ENST00000477605 C5orf47Q569G3 176 aa11.64□□□□□ -0.55
CCM2-209ENST00000477605 SNURFQ9Y675 71 aa11.64□□□□□ -0.55
CCM2-209ENST00000477605 ATP5EP56381 51 aaPredicted RBP11.63□□□□□ -0.55
CCM2-209ENST00000477605 MRPL55Q7Z7F7 128 aaKnown RBP11.63□□□□□ -0.55
CCM2-209ENST00000477605 C3orf84H3BNL1 204 aa11.63□□□□□ -0.55
CCM2-209ENST00000477605 FAM168BA1KXE4 195 aa11.62□□□□□ -0.55
CCM2-209ENST00000477605 PRB2P02812 416 aaPredicted RBP11.61□□□□□ -0.55
CCM2-209ENST00000477605 C1orf137Q5JT78 98 aa11.61□□□□□ -0.55
CCM2-209ENST00000477605 TGP01266 2768 aa11.61□□□□□ -0.55
CCM2-209ENST00000477605 A0A1W2PNM2 257 aa11.61□□□□□ -0.55
CCM2-209ENST00000477605 F8WEM9 126 aa11.61□□□□□ -0.55
CCM2-209ENST00000477605 CASC10Q5T4H9 136 aa11.61□□□□□ -0.55
CCM2-209ENST00000477605 KRTAP7-1Q8IUC3 87 aa11.61□□□□□ -0.55
CCM2-209ENST00000477605 Q8NBF4 154 aa11.61□□□□□ -0.55
CCM2-209ENST00000477605 Q8N9L7 120 aa11.6□□□□□ -0.55
CCM2-209ENST00000477605 TMEM254Q8TBM7 123 aa11.6□□□□□ -0.55
CCM2-209ENST00000477605 SPRR4Q96PI1 79 aa11.6□□□□□ -0.55
CCM2-209ENST00000477605 OCR1Q9BZK8 76 aa11.6□□□□□ -0.55
CCM2-209ENST00000477605 Q5XG85 94 aa11.58□□□□□ -0.56
CCM2-209ENST00000477605 ST20-AS1Q8NBB2 130 aa11.56□□□□□ -0.56
CCM2-209ENST00000477605 REG3GQ6UW15 175 aa11.56□□□□□ -0.56
CCM2-209ENST00000477605 UBE2BP63146 152 aa11.55□□□□□ -0.56
CCM2-209ENST00000477605 A0A0U1RQV1 116 aa11.54□□□□□ -0.56
CCM2-209ENST00000477605 SMIM29Q86T20 159 aa11.5□□□□□ -0.57
CCM2-209ENST00000477605 SMIM26A0A096LP01 95 aa11.49□□□□□ -0.57
CCM2-209ENST00000477605 K7EIL1 84 aa11.49□□□□□ -0.57
CCM2-209ENST00000477605 C4orf26Q17RF5 130 aa11.49□□□□□ -0.57
CCM2-209ENST00000477605 CNBPP62633 177 aaKnown RBP11.48□□□□□ -0.57
CCM2-209ENST00000477605 C16orf90A8MZG2 172 aa11.48□□□□□ -0.57
CCM2-209ENST00000477605 TENM3Q9P273 2699 aa11.47□□□□□ -0.57
CCM2-209ENST00000477605 LCE6AA0A183 80 aa11.47□□□□□ -0.57
CCM2-209ENST00000477605 IGLV8-61A0A075B6I0 122 aa11.45□□□□□ -0.58
CCM2-209ENST00000477605 DSCR10P59022 87 aa11.45□□□□□ -0.58
CCM2-209ENST00000477605 LINC00476Q8WZB0 136 aa11.45□□□□□ -0.58
CCM2-209ENST00000477605 DNAH9Q9NYC9 4486 aa11.45□□□□□ -0.58
CCM2-209ENST00000477605 HRCT1Q6UXD1 115 aa11.42□□□□□ -0.58
CCM2-209ENST00000477605 A0A096LNI7 61 aa11.42□□□□□ -0.58
CCM2-209ENST00000477605 C14orf177Q52M58 125 aa11.41□□□□□ -0.58
CCM2-209ENST00000477605 DNAH1Q9P2D7 4330 aa11.4□□□□□ -0.58
CCM2-209ENST00000477605 IGFL1Q6UW32 110 aa11.4□□□□□ -0.58
CCM2-209ENST00000477605 HIGD2AQ9BW72 106 aa11.4□□□□□ -0.58
CCM2-209ENST00000477605 FAM30AQ9NZY2 134 aa11.39□□□□□ -0.59
CCM2-209ENST00000477605 A0A1W2PNN7 141 aa11.38□□□□□ -0.59
CCM2-209ENST00000477605 K7EQZ3 153 aa11.38□□□□□ -0.59
CCM2-209ENST00000477605 H0Y9J4 135 aa11.37□□□□□ -0.59
CCM2-209ENST00000477605 PSCAO43653 123 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms