RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 LCE6AA0A183 80 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 C3orf84H3BNL1 204 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 TMEM256-PLSCR3K7ERE1 68 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 NCR3O14931 201 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 PSCAO43653 123 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 SLPIP03973 132 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 BAALC-AS2P0C853 105 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 RPL18AQ02543 176 aaKnown RBP4.34□□□□□ -1.71
LDB3-206ENST00000477489 C6orf99Q4VX62 202 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 Q6ZRP5 223 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 NKAPP1Q8N9T2 125 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 FAM218AQ96MZ4 157 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 LYSTQ99698 3801 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 VPS25Q9BRG1 176 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 ORMDL1Q9P0S3 153 aa4.34□□□□□ -1.71
LDB3-206ENST00000477489 TRBV10-3A0A0K0K1G6 114 aa4.33□□□□□ -1.72
LDB3-206ENST00000477489 JMJD7-PLA2G4BH0Y9G9 81 aa4.33□□□□□ -1.72
LDB3-206ENST00000477489 ZNF73O43830 326 aaPredicted RBP4.33□□□□□ -1.72
LDB3-206ENST00000477489 LINC00575Q6W349 94 aa4.33□□□□□ -1.72
LDB3-206ENST00000477489 MTURNQ8N3F0 131 aa4.33□□□□□ -1.72
LDB3-206ENST00000477489 Q8N814 137 aa4.33□□□□□ -1.72
LDB3-206ENST00000477489 Q8NDZ9 215 aa4.33□□□□□ -1.72
LDB3-206ENST00000477489 KCNQ1DNQ9H478 68 aa4.33□□□□□ -1.72
LDB3-206ENST00000477489 XAGE1AQ9HD64 81 aa4.33□□□□□ -1.72
LDB3-206ENST00000477489 A0A087WYN8 130 aa4.32□□□□□ -1.72
LDB3-206ENST00000477489 hADV29S1A0JD25 119 aa4.32□□□□□ -1.72
LDB3-206ENST00000477489 C16orf90A8MZG2 172 aa4.32□□□□□ -1.72
LDB3-206ENST00000477489 PRYO14603 147 aa4.32□□□□□ -1.72
LDB3-206ENST00000477489 LECT2O14960 151 aa4.32□□□□□ -1.72
LDB3-206ENST00000477489 ELOF1P60002 83 aaKnown RBP4.32□□□□□ -1.72
LDB3-206ENST00000477489 PRR3P79522 188 aaKnown RBP4.32□□□□□ -1.72
LDB3-206ENST00000477489 GAGE2EQ4V326 116 aa4.32□□□□□ -1.72
LDB3-206ENST00000477489 C9orf129Q5T035 196 aaKnown RBP4.32□□□□□ -1.72
LDB3-206ENST00000477489 CASC10Q5T4H9 136 aa4.32□□□□□ -1.72
LDB3-206ENST00000477489 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.32□□□□□ -1.72
LDB3-206ENST00000477489 OBSCN-AS1Q96MR7 158 aa4.32□□□□□ -1.72
LDB3-206ENST00000477489 KRTAP1-5Q9BYS1 174 aa4.32□□□□□ -1.72
LDB3-206ENST00000477489 LINC00474Q9P2X8 69 aa4.32□□□□□ -1.72
LDB3-206ENST00000477489 GAGE2DQ9UEU5 116 aa4.32□□□□□ -1.72
LDB3-206ENST00000477489 RYR1P21817 5038 aa4.31□□□□□ -1.72
LDB3-206ENST00000477489 COX7BP24311 80 aa4.31□□□□□ -1.72
LDB3-206ENST00000477489 CSMD3Q7Z407 3707 aa4.31□□□□□ -1.72
LDB3-206ENST00000477489 TEX49A0A1B0GTD5 131 aa4.3□□□□□ -1.72
LDB3-206ENST00000477489 PDE6GP18545 87 aa4.3□□□□□ -1.72
LDB3-206ENST00000477489 SPRR1AP35321 89 aa4.3□□□□□ -1.72
LDB3-206ENST00000477489 Q6ZRN7 208 aaPredicted RBP4.3□□□□□ -1.72
LDB3-206ENST00000477489 C9orf163Q8N9P6 203 aa4.3□□□□□ -1.72
LDB3-206ENST00000477489 IGLV1-50A0A075B6I6 118 aa4.29□□□□□ -1.72
LDB3-206ENST00000477489 LRCOL1A6NCL2 159 aa4.29□□□□□ -1.72
LDB3-206ENST00000477489 SCGB1A1P11684 91 aa4.29□□□□□ -1.72
LDB3-206ENST00000477489 Q6ZR54 194 aa4.29□□□□□ -1.72
LDB3-206ENST00000477489 MRPL55Q7Z7F7 128 aaKnown RBP4.29□□□□□ -1.72
LDB3-206ENST00000477489 C7orf33Q8WU49 177 aa4.29□□□□□ -1.72
LDB3-206ENST00000477489 SIGMAR1Q99720 223 aa4.29□□□□□ -1.72
LDB3-206ENST00000477489 DHRS4-AS1Q9P1J3 65 aa4.29□□□□□ -1.72
LDB3-206ENST00000477489 GAGE2BQ13066 116 aa4.28□□□□□ -1.72
LDB3-206ENST00000477489 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
LDB3-206ENST00000477489 C22orf24Q9Y442 160 aa4.28□□□□□ -1.72
LDB3-206ENST00000477489 SERTAD4-AS1Q5TG53 156 aa4.27□□□□□ -1.73
LDB3-206ENST00000477489 DNAH7Q8WXX0 4024 aa4.27□□□□□ -1.73
LDB3-206ENST00000477489 LOC110117498A0A087WWA1 95 aa4.26□□□□□ -1.73
LDB3-206ENST00000477489 KRTAP4-16G5E9R7 235 aaPredicted RBP4.26□□□□□ -1.73
LDB3-206ENST00000477489 SDIM1Q6ZPB5 146 aa4.26□□□□□ -1.73
LDB3-206ENST00000477489 Q6ZRX8 168 aa4.26□□□□□ -1.73
LDB3-206ENST00000477489 A0A087WTM6 91 aa4.25□□□□□ -1.73
LDB3-206ENST00000477489 A0A096LNI7 61 aa4.25□□□□□ -1.73
LDB3-206ENST00000477489 ETDCA0A1B0GVM5 59 aa4.25□□□□□ -1.73
LDB3-206ENST00000477489 A0A1B0GW54 56 aa4.25□□□□□ -1.73
LDB3-206ENST00000477489 EPM2AB3EWF7 344 aa4.25□□□□□ -1.73
LDB3-206ENST00000477489 H0Y9J4 135 aa4.25□□□□□ -1.73
LDB3-206ENST00000477489 RBM3P98179 157 aaKnown RBP4.25□□□□□ -1.73
LDB3-206ENST00000477489 Q6ZQY7 126 aa4.25□□□□□ -1.73
LDB3-206ENST00000477489 FRAS1Q86XX4 4008 aa4.24□□□□□ -1.73
LDB3-206ENST00000477489 B5MCH6 92 aa4.24□□□□□ -1.73
LDB3-206ENST00000477489 CCKP06307 115 aa4.24□□□□□ -1.73
LDB3-206ENST00000477489 C1orf134Q5TEV5 83 aa4.24□□□□□ -1.73
LDB3-206ENST00000477489 Q6Q795 121 aa4.24□□□□□ -1.73
LDB3-206ENST00000477489 REG3GQ6UW15 175 aa4.24□□□□□ -1.73
LDB3-206ENST00000477489 LINC00643Q86TS7 51 aa4.24□□□□□ -1.73
LDB3-206ENST00000477489 LINC00476Q8WZB0 136 aa4.24□□□□□ -1.73
LDB3-206ENST00000477489 IMUPQ9GZP8 106 aa4.24□□□□□ -1.73
LDB3-206ENST00000477489 VPS13DQ5THJ4 4388 aa4.23□□□□□ -1.73
LDB3-206ENST00000477489 IGLV5-48A0A075B6I7 105 aa4.23□□□□□ -1.73
LDB3-206ENST00000477489 FAM19A5Q7Z5A7 132 aaPredicted RBP4.23□□□□□ -1.73
LDB3-206ENST00000477489 KRTAP7-1Q8IUC3 87 aa4.23□□□□□ -1.73
LDB3-206ENST00000477489 LAMTOR3Q9UHA4 124 aa4.23□□□□□ -1.73
LDB3-206ENST00000477489 PLECQ15149 4684 aaKnown RBP4.23□□□□□ -1.73
LDB3-206ENST00000477489 STARD9Q9P2P6 4700 aa4.23□□□□□ -1.73
LDB3-206ENST00000477489 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.22□□□□□ -1.73
LDB3-206ENST00000477489 FAM168BA1KXE4 195 aa4.22□□□□□ -1.73
LDB3-206ENST00000477489 RPL37AP8A6NKH3 93 aa4.22□□□□□ -1.73
LDB3-206ENST00000477489 ATP5EP2Q5VTU8 51 aa4.22□□□□□ -1.73
LDB3-206ENST00000477489 GAGE2AQ6NT46 116 aa4.22□□□□□ -1.73
LDB3-206ENST00000477489 DSCR8Q96T75 97 aa4.22□□□□□ -1.73
LDB3-206ENST00000477489 C14orf132Q9NPU4 83 aa4.22□□□□□ -1.73
LDB3-206ENST00000477489 IGKV2-24A0A0C4DH68 120 aa4.21□□□□□ -1.74
LDB3-206ENST00000477489 TRBV7-4A0A0J9YYF1 115 aa4.21□□□□□ -1.74
LDB3-206ENST00000477489 TRBV7-7A0A0K0K1E9 115 aa4.21□□□□□ -1.74
LDB3-206ENST00000477489 A0A1W2PNN7 141 aa4.21□□□□□ -1.74
LDB3-206ENST00000477489 XGP55808 180 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms