RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 JOSD1Q15040 202 aaPredicted RBP7.18□□□□□ -1.26
MRPL55-228ENST00000476267 NDUFA5Q16718 116 aa7.18□□□□□ -1.26
MRPL55-228ENST00000476267 S100A7L2Q5SY68 101 aa7.18□□□□□ -1.26
MRPL55-228ENST00000476267 C5orf52A6NGY3 159 aa7.17□□□□□ -1.26
MRPL55-228ENST00000476267 SERF1AO75920 110 aa7.17□□□□□ -1.26
MRPL55-228ENST00000476267 ADAMTSL4-AS1Q5T5F5 129 aa7.17□□□□□ -1.26
MRPL55-228ENST00000476267 C9orf153Q5TBE3 101 aa7.17□□□□□ -1.26
MRPL55-228ENST00000476267 SLC7A5P1Q8MH63 180 aa7.17□□□□□ -1.26
MRPL55-228ENST00000476267 MIEN1Q9BRT3 115 aa7.17□□□□□ -1.26
MRPL55-228ENST00000476267 CRCT1Q9UGL9 99 aa7.17□□□□□ -1.26
MRPL55-228ENST00000476267 DPM2O94777 84 aa7.16□□□□□ -1.26
MRPL55-228ENST00000476267 SPRR1BP22528 89 aa7.16□□□□□ -1.26
MRPL55-228ENST00000476267 A0A0J9YXY3 114 aa7.15□□□□□ -1.26
MRPL55-228ENST00000476267 IGKCP01834 107 aa7.15□□□□□ -1.26
MRPL55-228ENST00000476267 TRGC2P03986 189 aa7.15□□□□□ -1.26
MRPL55-228ENST00000476267 MT1HP80294 61 aa7.15□□□□□ -1.26
MRPL55-228ENST00000476267 PMCHL2Q9BQD1 86 aa7.15□□□□□ -1.26
MRPL55-228ENST00000476267 LGALS3P17931 250 aaKnown RBP7.14□□□□□ -1.27
MRPL55-228ENST00000476267 HERVK_113P61574 105 aa7.14□□□□□ -1.27
MRPL55-228ENST00000476267 NPC2P61916 151 aa7.14□□□□□ -1.27
MRPL55-228ENST00000476267 LITAFQ99732 161 aa7.13□□□□□ -1.27
MRPL55-228ENST00000476267 E9PLD3 99 aa7.12□□□□□ -1.27
MRPL55-228ENST00000476267 HSPB8Q9UJY1 196 aa7.12□□□□□ -1.27
MRPL55-228ENST00000476267 FABP4P15090 132 aa7.11□□□□□ -1.27
MRPL55-228ENST00000476267 PCOTHQ58A44 107 aa7.11□□□□□ -1.27
MRPL55-228ENST00000476267 LIMD2Q9BT23 127 aa7.1□□□□□ -1.27
MRPL55-228ENST00000476267 SPANXCQ9NY87 97 aa7.1□□□□□ -1.27
MRPL55-228ENST00000476267 LINC00308Q8TCZ7 52 aa7.09□□□□□ -1.27
MRPL55-228ENST00000476267 IGLV8-61A0A075B6I0 122 aa7.08□□□□□ -1.28
MRPL55-228ENST00000476267 HRCT1Q6UXD1 115 aa7.08□□□□□ -1.28
MRPL55-228ENST00000476267 DHRS4-AS1Q9P1J3 65 aa7.08□□□□□ -1.28
MRPL55-228ENST00000476267 CBY1Q9Y3M2 126 aa7.08□□□□□ -1.28
MRPL55-228ENST00000476267 C9orf92A6NGG3 77 aa7.07□□□□□ -1.28
MRPL55-228ENST00000476267 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
MRPL55-228ENST00000476267 HINT1P49773 126 aaPredicted RBP7.07□□□□□ -1.28
MRPL55-228ENST00000476267 ELOF1P60002 83 aaKnown RBP7.07□□□□□ -1.28
MRPL55-228ENST00000476267 SLC25A34Q6PIV7 304 aa7.07□□□□□ -1.28
MRPL55-228ENST00000476267 FLGP20930 4061 aaPredicted RBP7.06□□□□□ -1.28
MRPL55-228ENST00000476267 TIMM17BO60830 172 aa7.06□□□□□ -1.28
MRPL55-228ENST00000476267 CD164Q04900 197 aa7.06□□□□□ -1.28
MRPL55-228ENST00000476267 CFC1BP0CG36 223 aa7.05□□□□□ -1.28
MRPL55-228ENST00000476267 SPANXDQ9BXN6 97 aa7.05□□□□□ -1.28
MRPL55-228ENST00000476267 LAMTOR3Q9UHA4 124 aa7.05□□□□□ -1.28
MRPL55-228ENST00000476267 COLCA2A8K830 154 aa7.04□□□□□ -1.28
MRPL55-228ENST00000476267 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
MRPL55-228ENST00000476267 Q5XG85 94 aa7.04□□□□□ -1.28
MRPL55-228ENST00000476267 OR13C6PQ8NH95 151 aa7.04□□□□□ -1.28
MRPL55-228ENST00000476267 C6orf99Q4VX62 202 aa7.03□□□□□ -1.28
MRPL55-228ENST00000476267 SMIM29Q86T20 159 aa7.03□□□□□ -1.28
MRPL55-228ENST00000476267 SYS1-DBNDD2H3BUS1 97 aa7.02□□□□□ -1.29
MRPL55-228ENST00000476267 COX7BP24311 80 aa7.02□□□□□ -1.29
MRPL55-228ENST00000476267 Q1RN00 199 aa7.02□□□□□ -1.29
MRPL55-228ENST00000476267 LINC01545Q5VT33 79 aa7.01□□□□□ -1.29
MRPL55-228ENST00000476267 TTTY13Q9BZ97 58 aa7.01□□□□□ -1.29
MRPL55-228ENST00000476267 PRO1933Q9H354 126 aa7.01□□□□□ -1.29
MRPL55-228ENST00000476267 TRBV7-6A0A0J9YX20 115 aa7□□□□□ -1.29
MRPL55-228ENST00000476267 TEX49A0A1B0GTD5 131 aa7□□□□□ -1.29
MRPL55-228ENST00000476267 C1orf195Q5TG92 126 aa7□□□□□ -1.29
MRPL55-228ENST00000476267 IGLV5-48A0A075B6I7 105 aa6.99□□□□□ -1.29
MRPL55-228ENST00000476267 ZNF815PA8K554 130 aa6.99□□□□□ -1.29
MRPL55-228ENST00000476267 H7C2G1 150 aa6.99□□□□□ -1.29
MRPL55-228ENST00000476267 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
MRPL55-228ENST00000476267 LINC00518Q8N0U6 118 aa6.99□□□□□ -1.29
MRPL55-228ENST00000476267 TAL2Q16559 108 aa6.98□□□□□ -1.29
MRPL55-228ENST00000476267 DEFB105AQ8NG35 78 aa6.98□□□□□ -1.29
MRPL55-228ENST00000476267 A0A0G2JQZ4 141 aa6.97□□□□□ -1.29
MRPL55-228ENST00000476267 A0A1B0GWB2 263 aa6.96□□□□□ -1.3
MRPL55-228ENST00000476267 HIST1H2BKO60814 126 aa6.96□□□□□ -1.3
MRPL55-228ENST00000476267 HIST1H2BJP06899 126 aa6.96□□□□□ -1.3
MRPL55-228ENST00000476267 HIST1H2BOP23527 126 aa6.96□□□□□ -1.3
MRPL55-228ENST00000476267 HIST1H2BBP33778 126 aa6.96□□□□□ -1.3
MRPL55-228ENST00000476267 AKR1D1P51857 326 aa6.96□□□□□ -1.3
MRPL55-228ENST00000476267 HIST1H2BDP58876 126 aa6.96□□□□□ -1.3
MRPL55-228ENST00000476267 HIST1H2BCP62807 126 aa6.96□□□□□ -1.3
MRPL55-228ENST00000476267 HIST2H2BEQ16778 126 aa6.96□□□□□ -1.3
MRPL55-228ENST00000476267 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.96□□□□□ -1.3
MRPL55-228ENST00000476267 PET117Q6UWS5 81 aa6.96□□□□□ -1.3
MRPL55-228ENST00000476267 HIST1H2BHQ93079 126 aa6.96□□□□□ -1.3
MRPL55-228ENST00000476267 HIST1H2BNQ99877 126 aa6.96□□□□□ -1.3
MRPL55-228ENST00000476267 HIST1H2BMQ99879 126 aa6.96□□□□□ -1.3
MRPL55-228ENST00000476267 C3orf79P0CE67 100 aa6.93□□□□□ -1.3
MRPL55-228ENST00000476267 IFITM1P13164 125 aa6.9□□□□□ -1.3
MRPL55-228ENST00000476267 ANKRD39Q53RE8 183 aa6.9□□□□□ -1.3
MRPL55-228ENST00000476267 A4D1N5 150 aa6.89□□□□□ -1.31
MRPL55-228ENST00000476267 M0R2T5 61 aa6.89□□□□□ -1.31
MRPL55-228ENST00000476267 SCGB1D4Q6XE38 83 aa6.89□□□□□ -1.31
MRPL55-228ENST00000476267 A6NDN8 102 aa6.88□□□□□ -1.31
MRPL55-228ENST00000476267 Q6ZVH6 145 aa6.88□□□□□ -1.31
MRPL55-228ENST00000476267 MUSTN1Q8IVN3 82 aa6.88□□□□□ -1.31
MRPL55-228ENST00000476267 COA6Q5JTJ3 125 aaKnown RBP6.87□□□□□ -1.31
MRPL55-228ENST00000476267 SMIM11BQ8TCY0 68 aa6.87□□□□□ -1.31
MRPL55-228ENST00000476267 COPS9Q8WXC6 57 aa6.87□□□□□ -1.31
MRPL55-228ENST00000476267 TCL1BO95988 128 aa6.86□□□□□ -1.31
MRPL55-228ENST00000476267 COX6B2Q6YFQ2 88 aa6.86□□□□□ -1.31
MRPL55-228ENST00000476267 PCP2Q8IVA1 136 aa6.85□□□□□ -1.31
MRPL55-228ENST00000476267 NHP2Q9NX24 153 aaKnown RBP6.85□□□□□ -1.31
MRPL55-228ENST00000476267 KRTDAPP60985 99 aa6.84□□□□□ -1.31
MRPL55-228ENST00000476267 TRAV13-2A0A0B4J235 113 aa6.83□□□□□ -1.32
MRPL55-228ENST00000476267 S100A1P23297 94 aa6.82□□□□□ -1.32
MRPL55-228ENST00000476267 LINC00575Q6W349 94 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms