RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 TLX1NBP0CAT3 122 aa12.4□□□□□ -0.42
SYF2-204ENST00000476231 Q6ZQY7 126 aa12.4□□□□□ -0.42
SYF2-204ENST00000476231 Q6ZRP5 223 aa12.4□□□□□ -0.42
SYF2-204ENST00000476231 NBDYA0A0U1RRE5 68 aa12.39□□□□□ -0.43
SYF2-204ENST00000476231 PSCAO43653 123 aa12.39□□□□□ -0.43
SYF2-204ENST00000476231 Q6ZQT0 140 aa12.39□□□□□ -0.43
SYF2-204ENST00000476231 STARD9Q9P2P6 4700 aa12.39□□□□□ -0.43
SYF2-204ENST00000476231 LAMTOR3Q9UHA4 124 aa12.38□□□□□ -0.43
SYF2-204ENST00000476231 PLA2G2DQ9UNK4 145 aa12.38□□□□□ -0.43
SYF2-204ENST00000476231 B5MCH6 92 aa12.36□□□□□ -0.43
SYF2-204ENST00000476231 ATOX1O00244 68 aa12.36□□□□□ -0.43
SYF2-204ENST00000476231 LINC00528Q8N1L1 170 aa12.35□□□□□ -0.43
SYF2-204ENST00000476231 DSCR8Q96T75 97 aa12.35□□□□□ -0.43
SYF2-204ENST00000476231 UBL5Q9BZL1 73 aa12.35□□□□□ -0.43
SYF2-204ENST00000476231 IGKV3D-7A0A0C4DH55 119 aa12.34□□□□□ -0.43
SYF2-204ENST00000476231 VPS13DQ5THJ4 4388 aa12.33□□□□□ -0.44
SYF2-204ENST00000476231 C14orf177Q52M58 125 aa12.33□□□□□ -0.44
SYF2-204ENST00000476231 KCNQ1DNQ9H478 68 aa12.33□□□□□ -0.44
SYF2-204ENST00000476231 UQCRQO14949 82 aa12.32□□□□□ -0.44
SYF2-204ENST00000476231 IGLV5-37A0A075B6J1 123 aa12.3□□□□□ -0.44
SYF2-204ENST00000476231 CNBPP62633 177 aaKnown RBP12.3□□□□□ -0.44
SYF2-204ENST00000476231 C3orf22Q8N5N4 141 aa12.3□□□□□ -0.44
SYF2-204ENST00000476231 TRBV7-4A0A0J9YYF1 115 aa12.3□□□□□ -0.44
SYF2-204ENST00000476231 NKAPP1Q8N9T2 125 aa12.3□□□□□ -0.44
SYF2-204ENST00000476231 DNAH10Q8IVF4 4471 aa12.3□□□□□ -0.44
SYF2-204ENST00000476231 LOC107984640A0A0U1RRK4 108 aa12.29□□□□□ -0.44
SYF2-204ENST00000476231 TENM2Q9NT68 2774 aa12.29□□□□□ -0.44
SYF2-204ENST00000476231 COX7CP15954 63 aa12.27□□□□□ -0.44
SYF2-204ENST00000476231 Q6ZRN7 208 aaPredicted RBP12.27□□□□□ -0.44
SYF2-204ENST00000476231 FBN3Q75N90 2809 aa12.27□□□□□ -0.45
SYF2-204ENST00000476231 C7orf33Q8WU49 177 aa12.25□□□□□ -0.45
SYF2-204ENST00000476231 LRCOL1A6NCL2 159 aa12.25□□□□□ -0.45
SYF2-204ENST00000476231 SERTAD4-AS1Q5TG53 156 aa12.25□□□□□ -0.45
SYF2-204ENST00000476231 WWC2-AS2Q96NR7 200 aa12.24□□□□□ -0.45
SYF2-204ENST00000476231 M0R2N4 97 aa12.23□□□□□ -0.45
SYF2-204ENST00000476231 PRYO14603 147 aa12.22□□□□□ -0.45
SYF2-204ENST00000476231 SS18L2Q9UHA2 77 aa12.22□□□□□ -0.45
SYF2-204ENST00000476231 A0A087WVE0 104 aa12.21□□□□□ -0.46
SYF2-204ENST00000476231 Q6ZR54 194 aa12.21□□□□□ -0.46
SYF2-204ENST00000476231 DHRS4-AS1Q9P1J3 65 aa12.21□□□□□ -0.46
SYF2-204ENST00000476231 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.2□□□□□ -0.46
SYF2-204ENST00000476231 SPRR1AP35321 89 aa12.2□□□□□ -0.46
SYF2-204ENST00000476231 C9orf153Q5TBE3 101 aa12.2□□□□□ -0.46
SYF2-204ENST00000476231 Q6ZVQ6 151 aa12.2□□□□□ -0.46
SYF2-204ENST00000476231 CRYGAP11844 174 aa12.19□□□□□ -0.46
SYF2-204ENST00000476231 SERP2Q8N6R1 65 aa12.19□□□□□ -0.46
SYF2-204ENST00000476231 IGLV1-50A0A075B6I6 118 aa12.19□□□□□ -0.46
SYF2-204ENST00000476231 BCE1O60756 84 aa12.19□□□□□ -0.46
SYF2-204ENST00000476231 CXCL6P80162 114 aa12.19□□□□□ -0.46
SYF2-204ENST00000476231 FAM168BA1KXE4 195 aa12.18□□□□□ -0.46
SYF2-204ENST00000476231 C16orf90A8MZG2 172 aa12.18□□□□□ -0.46
SYF2-204ENST00000476231 KRTAP4-16G5E9R7 235 aaPredicted RBP12.18□□□□□ -0.46
SYF2-204ENST00000476231 LINC01547P58512 204 aaPredicted RBP12.17□□□□□ -0.46
SYF2-204ENST00000476231 PKIGQ9Y2B9 76 aa12.17□□□□□ -0.46
SYF2-204ENST00000476231 Q6ZRX8 168 aa12.16□□□□□ -0.46
SYF2-204ENST00000476231 A0A096LNI7 61 aa12.16□□□□□ -0.46
SYF2-204ENST00000476231 KRTAP7-1Q8IUC3 87 aa12.16□□□□□ -0.46
SYF2-204ENST00000476231 C9orf163Q8N9P6 203 aa12.16□□□□□ -0.46
SYF2-204ENST00000476231 FAM19A1Q7Z5A9 133 aa12.15□□□□□ -0.46
SYF2-204ENST00000476231 FAM19A5Q7Z5A7 132 aaPredicted RBP12.14□□□□□ -0.47
SYF2-204ENST00000476231 LY6G6CO95867 125 aa12.13□□□□□ -0.47
SYF2-204ENST00000476231 MRPL55Q7Z7F7 128 aaKnown RBP12.12□□□□□ -0.47
SYF2-204ENST00000476231 IGLV5-48A0A075B6I7 105 aa12.12□□□□□ -0.47
SYF2-204ENST00000476231 A0A1B0GW54 56 aa12.12□□□□□ -0.47
SYF2-204ENST00000476231 Q8N377 158 aa12.12□□□□□ -0.47
SYF2-204ENST00000476231 A0A087WTM6 91 aa12.11□□□□□ -0.47
SYF2-204ENST00000476231 IGKV2-24A0A0C4DH68 120 aa12.11□□□□□ -0.47
SYF2-204ENST00000476231 ETDCA0A1B0GVM5 59 aa12.11□□□□□ -0.47
SYF2-204ENST00000476231 HAMPP81172 84 aa12.11□□□□□ -0.47
SYF2-204ENST00000476231 LINC00476Q8WZB0 136 aa12.11□□□□□ -0.47
SYF2-204ENST00000476231 C3orf84H3BNL1 204 aa12.1□□□□□ -0.47
SYF2-204ENST00000476231 C1orf134Q5TEV5 83 aa12.09□□□□□ -0.47
SYF2-204ENST00000476231 RPL37AP8A6NKH3 93 aa12.09□□□□□ -0.47
SYF2-204ENST00000476231 Q9BRP9 147 aa12.08□□□□□ -0.48
SYF2-204ENST00000476231 SMIM20Q8N5G0 67 aa12.07□□□□□ -0.48
SYF2-204ENST00000476231 LINC00474Q9P2X8 69 aa12.06□□□□□ -0.48
SYF2-204ENST00000476231 DNAH6Q9C0G6 4158 aa12.06□□□□□ -0.48
SYF2-204ENST00000476231 A0A1W2PNN7 141 aa12.05□□□□□ -0.48
SYF2-204ENST00000476231 TGP01266 2768 aa12.05□□□□□ -0.48
SYF2-204ENST00000476231 DNAH2Q9P225 4427 aa12.04□□□□□ -0.48
SYF2-204ENST00000476231 KMT2AQ03164 3969 aa12.04□□□□□ -0.48
SYF2-204ENST00000476231 CHTF8P0CG12 524 aa12.03□□□□□ -0.48
SYF2-204ENST00000476231 TNP2Q05952 138 aa12.03□□□□□ -0.48
SYF2-204ENST00000476231 REG3GQ6UW15 175 aa12.03□□□□□ -0.48
SYF2-204ENST00000476231 DEFB105AQ8NG35 78 aa12.03□□□□□ -0.48
SYF2-204ENST00000476231 ALMS1Q8TCU4 4167 aa12.02□□□□□ -0.48
SYF2-204ENST00000476231 TRAV7A0A075B6U4 112 aa12□□□□□ -0.49
SYF2-204ENST00000476231 NREPQ16612 68 aa11.99□□□□□ -0.49
SYF2-204ENST00000476231 RTL8CO15255 209 aa11.98□□□□□ -0.49
SYF2-204ENST00000476231 FUSP35637 526 aaKnown RBP eCLIP11.98□□□□□ -0.49
SYF2-204ENST00000476231 DNAH17Q9UFH2 4485 aa11.96□□□□□ -0.49
SYF2-204ENST00000476231 TMEM258P61165 79 aa11.96□□□□□ -0.49
SYF2-204ENST00000476231 UBE2BP63146 152 aa11.96□□□□□ -0.5
SYF2-204ENST00000476231 ST20-AS1Q8NBB2 130 aa11.95□□□□□ -0.5
SYF2-204ENST00000476231 SPACA4Q8TDM5 124 aa11.95□□□□□ -0.5
SYF2-204ENST00000476231 C1orf137Q5JT78 98 aa11.94□□□□□ -0.5
SYF2-204ENST00000476231 PHF5AQ7RTV0 110 aaKnown RBP11.94□□□□□ -0.5
SYF2-204ENST00000476231 PANO1I0J062 215 aa11.94□□□□□ -0.5
SYF2-204ENST00000476231 ERC2-IT1O76042 136 aa11.94□□□□□ -0.5
SYF2-204ENST00000476231 SPRR4Q96PI1 79 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms