RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TCTE3Q8IZS6 198 aa1.51□□□□□ -2.17
PTCD3-211ENST00000476215 CNFNQ9BYD5 112 aa1.51□□□□□ -2.17
PTCD3-211ENST00000476215 RNASE7Q9H1E1 156 aaKnown RBP1.51□□□□□ -2.17
PTCD3-211ENST00000476215 DPH3P1Q9H4G8 78 aa1.51□□□□□ -2.17
PTCD3-211ENST00000476215 PLAC8Q9NZF1 115 aa1.51□□□□□ -2.17
PTCD3-211ENST00000476215 LPAP08519 4548 aa1.5□□□□□ -2.17
PTCD3-211ENST00000476215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.5□□□□□ -2.17
PTCD3-211ENST00000476215 TRAV26-2A0A0B4J265 109 aa1.5□□□□□ -2.17
PTCD3-211ENST00000476215 IGKV3OR2-268A0A0C4DH90 116 aa1.5□□□□□ -2.17
PTCD3-211ENST00000476215 TRBV6-5A0A0K0K1A5 114 aa1.5□□□□□ -2.17
PTCD3-211ENST00000476215 LINC00959A0A1B0GUT2 108 aa1.5□□□□□ -2.17
PTCD3-211ENST00000476215 I3L3M4 83 aa1.5□□□□□ -2.17
PTCD3-211ENST00000476215 FGF6P10767 208 aa1.5□□□□□ -2.17
PTCD3-211ENST00000476215 POLR2KP53803 58 aaKnown RBP1.5□□□□□ -2.17
PTCD3-211ENST00000476215 SMIM15Q7Z3B0 74 aa1.5□□□□□ -2.17
PTCD3-211ENST00000476215 RPL39LQ96EH5 51 aaKnown RBP1.5□□□□□ -2.17
PTCD3-211ENST00000476215 ST20Q9HBF5 79 aa1.5□□□□□ -2.17
PTCD3-211ENST00000476215 CDC42SE2Q9NRR3 84 aa1.5□□□□□ -2.17
PTCD3-211ENST00000476215 MUC2Q02817 5179 aa1.5□□□□□ -2.17
PTCD3-211ENST00000476215 GVQW2A0A096LPI5 108 aaPredicted RBP1.49□□□□□ -2.17
PTCD3-211ENST00000476215 IGHV1-58A0A0C4DH39 117 aa1.49□□□□□ -2.17
PTCD3-211ENST00000476215 TRBV27A0A0K0K1C4 114 aa1.49□□□□□ -2.17
PTCD3-211ENST00000476215 A0A1B0GUT8 65 aa1.49□□□□□ -2.17
PTCD3-211ENST00000476215 C1orf196B1AJZ1 125 aa1.49□□□□□ -2.17
PTCD3-211ENST00000476215 CCL25O15444 150 aa1.49□□□□□ -2.17
PTCD3-211ENST00000476215 ZNF25P17030 456 aaPredicted RBP1.49□□□□□ -2.17
PTCD3-211ENST00000476215 OR5A1Q8NGJ0 315 aa1.49□□□□□ -2.17
PTCD3-211ENST00000476215 TSKUQ8WUA8 353 aa1.49□□□□□ -2.17
PTCD3-211ENST00000476215 LINC00526Q96FQ7 95 aa1.49□□□□□ -2.17
PTCD3-211ENST00000476215 BTF3L4Q96K17 158 aa1.49□□□□□ -2.17
PTCD3-211ENST00000476215 LINC01600Q96MT4 127 aa1.49□□□□□ -2.17
PTCD3-211ENST00000476215 TMEM191AQ9H0A3 160 aa1.49□□□□□ -2.17
PTCD3-211ENST00000476215 OSTCQ9NRP0 149 aa1.49□□□□□ -2.17
PTCD3-211ENST00000476215 LINC00474Q9P2X8 69 aa1.49□□□□□ -2.17
PTCD3-211ENST00000476215 A0A096LNI7 61 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 ZNF727A8MUV8 499 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 HIGD1CA8MV81 97 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 COX7A2LO14548 114 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 PPP1R17O96001 155 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 SRP19P09132 144 aaKnown RBP1.48□□□□□ -2.17
PTCD3-211ENST00000476215 CEBPGP53567 150 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 SPINK6Q6UWN8 80 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 ALKAL2Q6UX46 152 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 KTN1-AS1Q86SY8 53 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 AKAP14Q86UN6 197 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 NUP35Q8NFH5 326 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 BORCS7Q96B45 105 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 SMIM7Q9BQ49 75 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 TMEM242Q9NWH2 141 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 V9GYV3 84 aa1.48□□□□□ -2.17
PTCD3-211ENST00000476215 TRAV13-1A0A0B4J241 112 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 LOC107984640A0A0U1RRK4 108 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 SMIM27A0A1W2PRY6 76 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 C7orf77A4D0Y5 90 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 DDTP30046 118 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 FCER1GP30273 86 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 CKS2P33552 79 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 C5orf38Q86SI9 138 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 CARD19Q96LW7 228 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 IMMP2LQ96T52 175 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 C20orf78Q9BR46 151 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 NAT8BQ9UHF3 227 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 PKIGQ9Y2B9 76 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 UBE2D4Q9Y2X8 147 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 HMCN1Q96RW7 5635 aa1.47□□□□□ -2.17
PTCD3-211ENST00000476215 F8W036 122 aa1.46□□□□□ -2.18
PTCD3-211ENST00000476215 APOMO95445 188 aa1.46□□□□□ -2.18
PTCD3-211ENST00000476215 RPL39P62891 51 aaKnown RBP1.46□□□□□ -2.18
PTCD3-211ENST00000476215 MRPS36P82909 103 aaKnown RBP1.46□□□□□ -2.18
PTCD3-211ENST00000476215 PEA15Q15121 130 aa1.46□□□□□ -2.18
PTCD3-211ENST00000476215 ADIRFQ15847 76 aa1.46□□□□□ -2.18
PTCD3-211ENST00000476215 C9orf116Q5BN46 136 aaPredicted RBP1.46□□□□□ -2.18
PTCD3-211ENST00000476215 UNQ6190/PRO20217Q6UXQ8 127 aa1.46□□□□□ -2.18
PTCD3-211ENST00000476215 SPANXA1Q9NS26 97 aa1.46□□□□□ -2.18
PTCD3-211ENST00000476215 MRPL35Q9NZE8 188 aaKnown RBP1.46□□□□□ -2.18
PTCD3-211ENST00000476215 NAT8Q9UHE5 227 aa1.46□□□□□ -2.18
PTCD3-211ENST00000476215 D6R8Y8 96 aa1.45□□□□□ -2.18
PTCD3-211ENST00000476215 H3BT86 120 aa1.45□□□□□ -2.18
PTCD3-211ENST00000476215 PPBPP02775 128 aa1.45□□□□□ -2.18
PTCD3-211ENST00000476215 MT-ND6P03923 174 aa1.45□□□□□ -2.18
PTCD3-211ENST00000476215 S100A8P05109 93 aa1.45□□□□□ -2.18
PTCD3-211ENST00000476215 C1orf137Q5JT78 98 aa1.45□□□□□ -2.18
PTCD3-211ENST00000476215 MRPL54Q6P161 138 aaKnown RBP1.45□□□□□ -2.18
PTCD3-211ENST00000476215 Q6ZUT4 128 aa1.45□□□□□ -2.18
PTCD3-211ENST00000476215 PHF5AQ7RTV0 110 aaKnown RBP1.45□□□□□ -2.18
PTCD3-211ENST00000476215 DIRC1Q969H9 104 aa1.45□□□□□ -2.18
PTCD3-211ENST00000476215 PRELID3AQ96N28 172 aa1.45□□□□□ -2.18
PTCD3-211ENST00000476215 SMIM2Q9BVW6 85 aa1.45□□□□□ -2.18
PTCD3-211ENST00000476215 TRBV30A0A0K0K1B3 111 aa1.44□□□□□ -2.18
PTCD3-211ENST00000476215 A0A1B0GW54 56 aa1.44□□□□□ -2.18
PTCD3-211ENST00000476215 IGIPA6NJ69 53 aa1.44□□□□□ -2.18
PTCD3-211ENST00000476215 NDUFA1O15239 70 aa1.44□□□□□ -2.18
PTCD3-211ENST00000476215 MT-ND4LP03901 98 aa1.44□□□□□ -2.18
PTCD3-211ENST00000476215 RPL28P46779 137 aaKnown RBP1.44□□□□□ -2.18
PTCD3-211ENST00000476215 UBE2D1P51668 147 aa1.44□□□□□ -2.18
PTCD3-211ENST00000476215 HBBP68871 147 aa1.44□□□□□ -2.18
PTCD3-211ENST00000476215 SPAG11BQ08648 103 aa1.44□□□□□ -2.18
PTCD3-211ENST00000476215 C2orf82Q6UX34 121 aa1.44□□□□□ -2.18
PTCD3-211ENST00000476215 Q8N8P6 123 aa1.44□□□□□ -2.18
PTCD3-211ENST00000476215 AMELXQ99217 191 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms