RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 PRR3P79522 188 aaKnown RBP11.68□□□□□ -0.54
ATG4B-217ENST00000475693 OBSCN-AS1Q96MR7 158 aa11.68□□□□□ -0.54
ATG4B-217ENST00000475693 RPL18AQ02543 176 aaKnown RBP11.67□□□□□ -0.54
ATG4B-217ENST00000475693 SMIM11BQ8TCY0 68 aa11.67□□□□□ -0.54
ATG4B-217ENST00000475693 COX17Q14061 63 aa11.66□□□□□ -0.54
ATG4B-217ENST00000475693 NDUFC2-KCTD14E9PQ53 114 aa11.65□□□□□ -0.54
ATG4B-217ENST00000475693 UQCRQO14949 82 aa11.65□□□□□ -0.54
ATG4B-217ENST00000475693 CNBPP62633 177 aaKnown RBP11.64□□□□□ -0.55
ATG4B-217ENST00000475693 GAGE2AQ6NT46 116 aa11.64□□□□□ -0.55
ATG4B-217ENST00000475693 C3orf22Q8N5N4 141 aa11.64□□□□□ -0.55
ATG4B-217ENST00000475693 HIST1H4AP62805 103 aaKnown RBP11.64□□□□□ -0.55
ATG4B-217ENST00000475693 C14orf177Q52M58 125 aa11.64□□□□□ -0.55
ATG4B-217ENST00000475693 A0A087WYN8 130 aa11.63□□□□□ -0.55
ATG4B-217ENST00000475693 KRTAP10-2P60368 255 aa11.62□□□□□ -0.55
ATG4B-217ENST00000475693 C9orf129Q5T035 196 aaKnown RBP11.62□□□□□ -0.55
ATG4B-217ENST00000475693 IGKV2-24A0A0C4DH68 120 aa11.62□□□□□ -0.55
ATG4B-217ENST00000475693 FAM168BA1KXE4 195 aa11.62□□□□□ -0.55
ATG4B-217ENST00000475693 A0A1B0GX51 115 aa11.61□□□□□ -0.55
ATG4B-217ENST00000475693 F8WDY8 70 aa11.61□□□□□ -0.55
ATG4B-217ENST00000475693 CHTF8P0CG12 524 aa11.61□□□□□ -0.55
ATG4B-217ENST00000475693 PKHD1P08F94 4074 aa11.61□□□□□ -0.55
ATG4B-217ENST00000475693 A0A096LNI7 61 aa11.59□□□□□ -0.55
ATG4B-217ENST00000475693 ATOX1O00244 68 aa11.59□□□□□ -0.55
ATG4B-217ENST00000475693 Q6JHZ5 121 aa11.59□□□□□ -0.55
ATG4B-217ENST00000475693 C9orf163Q8N9P6 203 aa11.59□□□□□ -0.55
ATG4B-217ENST00000475693 PANO1I0J062 215 aa11.58□□□□□ -0.56
ATG4B-217ENST00000475693 NCR3O14931 201 aa11.58□□□□□ -0.56
ATG4B-217ENST00000475693 COX7CP15954 63 aa11.58□□□□□ -0.56
ATG4B-217ENST00000475693 C9orf153Q5TBE3 101 aa11.58□□□□□ -0.56
ATG4B-217ENST00000475693 LINC00167Q96N53 147 aa11.58□□□□□ -0.56
ATG4B-217ENST00000475693 LOC107984640A0A0U1RRK4 108 aa11.56□□□□□ -0.56
ATG4B-217ENST00000475693 TLX1NBP0CAT3 122 aa11.56□□□□□ -0.56
ATG4B-217ENST00000475693 SERTAD4-AS1Q5TG53 156 aa11.56□□□□□ -0.56
ATG4B-217ENST00000475693 KRTAP7-1Q8IUC3 87 aa11.56□□□□□ -0.56
ATG4B-217ENST00000475693 C14orf132Q9NPU4 83 aa11.55□□□□□ -0.56
ATG4B-217ENST00000475693 ORMDL1Q9P0S3 153 aa11.55□□□□□ -0.56
ATG4B-217ENST00000475693 IGLV5-52A0A0A0MRZ9 124 aa11.55□□□□□ -0.56
ATG4B-217ENST00000475693 NDUFC2O95298 119 aa11.54□□□□□ -0.56
ATG4B-217ENST00000475693 CRYGAP11844 174 aa11.54□□□□□ -0.56
ATG4B-217ENST00000475693 OR13C6PQ8NH95 151 aa11.53□□□□□ -0.56
ATG4B-217ENST00000475693 LINC00846Q9NV44 126 aa11.52□□□□□ -0.56
ATG4B-217ENST00000475693 DNAH8Q96JB1 4490 aa11.52□□□□□ -0.56
ATG4B-217ENST00000475693 JMJD7-PLA2G4BH0Y9G9 81 aa11.52□□□□□ -0.57
ATG4B-217ENST00000475693 FAM19A5Q7Z5A7 132 aaPredicted RBP11.52□□□□□ -0.57
ATG4B-217ENST00000475693 A0A1W2PNN7 141 aa11.51□□□□□ -0.57
ATG4B-217ENST00000475693 VPREB1P12018 145 aa11.51□□□□□ -0.57
ATG4B-217ENST00000475693 C5orf47Q569G3 176 aa11.51□□□□□ -0.57
ATG4B-217ENST00000475693 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.51□□□□□ -0.57
ATG4B-217ENST00000475693 C16orf90A8MZG2 172 aa11.5□□□□□ -0.57
ATG4B-217ENST00000475693 CCKP06307 115 aa11.5□□□□□ -0.57
ATG4B-217ENST00000475693 S100A7L2Q5SY68 101 aa11.5□□□□□ -0.57
ATG4B-217ENST00000475693 TMEM256-PLSCR3K7ERE1 68 aa11.48□□□□□ -0.57
ATG4B-217ENST00000475693 ATP5EP2Q5VTU8 51 aa11.48□□□□□ -0.57
ATG4B-217ENST00000475693 DPH3Q96FX2 82 aa11.48□□□□□ -0.57
ATG4B-217ENST00000475693 LRP1BQ9NZR2 4599 aa11.46□□□□□ -0.57
ATG4B-217ENST00000475693 DYNC1H1Q14204 4646 aaKnown RBP11.45□□□□□ -0.58
ATG4B-217ENST00000475693 HAMPP81172 84 aa11.45□□□□□ -0.58
ATG4B-217ENST00000475693 SERP2Q8N6R1 65 aa11.45□□□□□ -0.58
ATG4B-217ENST00000475693 FAM30AQ9NZY2 134 aa11.45□□□□□ -0.58
ATG4B-217ENST00000475693 RPL37AP8A6NKH3 93 aa11.44□□□□□ -0.58
ATG4B-217ENST00000475693 TRBV10-3A0A0K0K1G6 114 aa11.44□□□□□ -0.58
ATG4B-217ENST00000475693 IGKV3D-7A0A0C4DH55 119 aa11.43□□□□□ -0.58
ATG4B-217ENST00000475693 KRTAP10-1P60331 282 aa11.43□□□□□ -0.58
ATG4B-217ENST00000475693 C7orf33Q8WU49 177 aa11.43□□□□□ -0.58
ATG4B-217ENST00000475693 RPS28P62857 69 aaKnown RBP11.42□□□□□ -0.58
ATG4B-217ENST00000475693 NKAPP1Q8N9T2 125 aa11.42□□□□□ -0.58
ATG4B-217ENST00000475693 SPACA4Q8TDM5 124 aa11.41□□□□□ -0.58
ATG4B-217ENST00000475693 PHF5AQ7RTV0 110 aaKnown RBP11.4□□□□□ -0.58
ATG4B-217ENST00000475693 A0A1B0GVY2 172 aa11.39□□□□□ -0.59
ATG4B-217ENST00000475693 M0R378 163 aa11.39□□□□□ -0.59
ATG4B-217ENST00000475693 LINC00336Q6ZUF6 198 aa11.39□□□□□ -0.59
ATG4B-217ENST00000475693 KRTAP11-1Q8IUC1 163 aa11.39□□□□□ -0.59
ATG4B-217ENST00000475693 J3KT08 172 aa11.39□□□□□ -0.59
ATG4B-217ENST00000475693 IGLV6-57P01721 117 aa11.39□□□□□ -0.59
ATG4B-217ENST00000475693 PLA2G2DQ9UNK4 145 aa11.39□□□□□ -0.59
ATG4B-217ENST00000475693 TMEM258P61165 79 aa11.37□□□□□ -0.59
ATG4B-217ENST00000475693 H3BQ85 93 aa11.37□□□□□ -0.59
ATG4B-217ENST00000475693 MRPL55Q7Z7F7 128 aaKnown RBP11.37□□□□□ -0.59
ATG4B-217ENST00000475693 hADV29S1A0JD25 119 aa11.36□□□□□ -0.59
ATG4B-217ENST00000475693 LINC00575Q6W349 94 aa11.36□□□□□ -0.59
ATG4B-217ENST00000475693 A0A087WVE0 104 aa11.35□□□□□ -0.59
ATG4B-217ENST00000475693 IGLV5-37A0A075B6J1 123 aa11.35□□□□□ -0.59
ATG4B-217ENST00000475693 C6orf99Q4VX62 202 aa11.34□□□□□ -0.59
ATG4B-217ENST00000475693 UBL5Q9BZL1 73 aa11.34□□□□□ -0.59
ATG4B-217ENST00000475693 LINC00474Q9P2X8 69 aa11.34□□□□□ -0.59
ATG4B-217ENST00000475693 LOC110117498A0A087WWA1 95 aa11.33□□□□□ -0.59
ATG4B-217ENST00000475693 IGLV1-50A0A075B6I6 118 aa11.32□□□□□ -0.6
ATG4B-217ENST00000475693 TRAV23DV6A0A075B6W5 121 aa11.32□□□□□ -0.6
ATG4B-217ENST00000475693 BCE1O60756 84 aa11.32□□□□□ -0.6
ATG4B-217ENST00000475693 SRRM2Q9UQ35 2752 aaKnown RBP11.32□□□□□ -0.6
ATG4B-217ENST00000475693 EPPK1P58107 5090 aaKnown RBP11.31□□□□□ -0.6
ATG4B-217ENST00000475693 PDE6GP18545 87 aa11.31□□□□□ -0.6
ATG4B-217ENST00000475693 CIRBP-AS1Q8TBR5 109 aa11.31□□□□□ -0.6
ATG4B-217ENST00000475693 RBM3P98179 157 aaKnown RBP11.3□□□□□ -0.6
ATG4B-217ENST00000475693 Q6ZQT0 140 aa11.3□□□□□ -0.6
ATG4B-217ENST00000475693 PKIGQ9Y2B9 76 aa11.29□□□□□ -0.6
ATG4B-217ENST00000475693 ZNF73O43830 326 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-217ENST00000475693 UBE2BP63146 152 aa11.28□□□□□ -0.6
ATG4B-217ENST00000475693 SCXQ7RTU7 201 aa11.28□□□□□ -0.6
ATG4B-217ENST00000475693 APOBP04114 4563 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms