RNA–Protein interactions for RNA: ENST00000475427.2

PDE6C-202, Transcript of phosphodiesterase 6C, humanhuman

TSL 2

Gene PDE6C, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-202ENST00000475427 SPART-AS1P0CW21 52 aa-1.88□□□□□ -2.71
PDE6C-202ENST00000475427 RPL38P63173 70 aaKnown RBP-1.88□□□□□ -2.71
PDE6C-202ENST00000475427 MRPS25P82663 173 aaKnown RBP-1.88□□□□□ -2.71
PDE6C-202ENST00000475427 SMIM21Q3B7S5 101 aa-1.88□□□□□ -2.71
PDE6C-202ENST00000475427 ARL11Q969Q4 196 aa-1.88□□□□□ -2.71
PDE6C-202ENST00000475427 LINC00474Q9P2X8 69 aa-1.88□□□□□ -2.71
PDE6C-202ENST00000475427 HIGD1AQ9Y241 93 aa-1.88□□□□□ -2.71
PDE6C-202ENST00000475427 TEX14Q8IWB6 1497 aa-1.88□□□□□ -2.71
PDE6C-202ENST00000475427 MRC2Q9UBG0 1479 aa-1.88□□□□□ -2.71
PDE6C-202ENST00000475427 SCTP09683 121 aa-1.89□□□□□ -2.71
PDE6C-202ENST00000475427 C12orf73Q69YU5 71 aa-1.89□□□□□ -2.71
PDE6C-202ENST00000475427 COMMD6Q7Z4G1 85 aa-1.89□□□□□ -2.71
PDE6C-202ENST00000475427 TCEAL4Q96EI5 215 aa-1.89□□□□□ -2.71
PDE6C-202ENST00000475427 C12orf57Q99622 126 aa-1.89□□□□□ -2.71
PDE6C-202ENST00000475427 SPANXDQ9BXN6 97 aa-1.89□□□□□ -2.71
PDE6C-202ENST00000475427 GRIN2AQ12879 1464 aa-1.89□□□□□ -2.71
PDE6C-202ENST00000475427 SYNMO15061 1565 aa-1.89□□□□□ -2.71
PDE6C-202ENST00000475427 C5P01031 1676 aa-1.9□□□□□ -2.71
PDE6C-202ENST00000475427 TOPAZ1Q8N9V7 1692 aa-1.9□□□□□ -2.71
PDE6C-202ENST00000475427 TRAV36DV7A0A075B6V5 113 aa-1.9□□□□□ -2.71
PDE6C-202ENST00000475427 A0A1B0GX51 115 aa-1.9□□□□□ -2.71
PDE6C-202ENST00000475427 COX6CP09669 75 aa-1.9□□□□□ -2.71
PDE6C-202ENST00000475427 IGLC6P0CF74 106 aa-1.9□□□□□ -2.71
PDE6C-202ENST00000475427 Q56UQ5 140 aa-1.9□□□□□ -2.71
PDE6C-202ENST00000475427 KCNRGQ8N5I3 272 aa-1.9□□□□□ -2.71
PDE6C-202ENST00000475427 MANBALQ9NQG1 85 aa-1.9□□□□□ -2.71
PDE6C-202ENST00000475427 CPSF1Q10570 1443 aaKnown RBP-1.91□□□□□ -2.71
PDE6C-202ENST00000475427 TOP2BQ02880 1626 aa-1.91□□□□□ -2.71
PDE6C-202ENST00000475427 IGLC2P0DOY2 106 aa-1.91□□□□□ -2.72
PDE6C-202ENST00000475427 IGLC3P0DOY3 106 aa-1.91□□□□□ -2.72
PDE6C-202ENST00000475427 GUCA1AP43080 201 aaPredicted RBP-1.91□□□□□ -2.72
PDE6C-202ENST00000475427 WT1-ASQ06250 92 aa-1.91□□□□□ -2.72
PDE6C-202ENST00000475427 Q0VG73 95 aa-1.91□□□□□ -2.72
PDE6C-202ENST00000475427 SAMD13Q5VXD3 122 aa-1.91□□□□□ -2.72
PDE6C-202ENST00000475427 LSM10Q969L4 123 aaKnown RBP-1.91□□□□□ -2.72
PDE6C-202ENST00000475427 VAMP8Q9BV40 100 aa-1.91□□□□□ -2.72
PDE6C-202ENST00000475427 PKD1L3Q7Z443 1732 aa-1.91□□□□□ -2.72
PDE6C-202ENST00000475427 NESP48681 1621 aa-1.91□□□□□ -2.72
PDE6C-202ENST00000475427 FAM135AQ9P2D6 1515 aa-1.91□□□□□ -2.72
PDE6C-202ENST00000475427 M0QZ58 72 aa-1.92□□□□□ -2.72
PDE6C-202ENST00000475427 CTXN2P0C2S0 81 aa-1.92□□□□□ -2.72
PDE6C-202ENST00000475427 LINC00694P0DN24 101 aa-1.92□□□□□ -2.72
PDE6C-202ENST00000475427 DPH3Q96FX2 82 aa-1.92□□□□□ -2.72
PDE6C-202ENST00000475427 HOPXQ9BPY8 73 aaPredicted RBP-1.92□□□□□ -2.72
PDE6C-202ENST00000475427 BOLA2Q9H3K6 86 aa-1.92□□□□□ -2.72
PDE6C-202ENST00000475427 NOP10Q9NPE3 64 aaKnown RBP-1.92□□□□□ -2.72
PDE6C-202ENST00000475427 PRO1854Q9UHT4 67 aa-1.92□□□□□ -2.72
PDE6C-202ENST00000475427 TMEM131LA2VDJ0 1609 aa-1.92□□□□□ -2.72
PDE6C-202ENST00000475427 EIF4G3O43432 1585 aaKnown RBP-1.93□□□□□ -2.72
PDE6C-202ENST00000475427 PHLPP1O60346 1717 aa-1.93□□□□□ -2.72
PDE6C-202ENST00000475427 S100PP25815 95 aa-1.93□□□□□ -2.72
PDE6C-202ENST00000475427 TOMM20LQ6UXN7 152 aa-1.93□□□□□ -2.72
PDE6C-202ENST00000475427 LEAP2Q969E1 77 aa-1.93□□□□□ -2.72
PDE6C-202ENST00000475427 ATPIF1Q9UII2 106 aa-1.93□□□□□ -2.72
PDE6C-202ENST00000475427 SERP1Q9Y6X1 66 aa-1.93□□□□□ -2.72
PDE6C-202ENST00000475427 A0A1B0GUL6 1792 aa-1.93□□□□□ -2.72
PDE6C-202ENST00000475427 POLR1AO95602 1720 aaPredicted RBP-1.94□□□□□ -2.72
PDE6C-202ENST00000475427 DNAH14Q0VDD8 3507 aa-1.94□□□□□ -2.72
PDE6C-202ENST00000475427 F6UZH7 168 aa-1.94□□□□□ -2.72
PDE6C-202ENST00000475427 GNG11P61952 73 aa-1.94□□□□□ -2.72
PDE6C-202ENST00000475427 PPP3R2Q96LZ3 170 aa-1.94□□□□□ -2.72
PDE6C-202ENST00000475427 OVOS2A0A0J9YW53 1432 aa-1.94□□□□□ -2.72
PDE6C-202ENST00000475427 OVOS2Q6IE36 1432 aa-1.94□□□□□ -2.72
PDE6C-202ENST00000475427 MKI67P46013 3256 aaKnown RBP-1.94□□□□□ -2.72
PDE6C-202ENST00000475427 SUPT6HQ7KZ85 1726 aaKnown RBP-1.94□□□□□ -2.72
PDE6C-202ENST00000475427 ROCK1Q13464 1354 aa-1.95□□□□□ -2.72
PDE6C-202ENST00000475427 PLCH1Q4KWH8 1693 aa-1.95□□□□□ -2.72
PDE6C-202ENST00000475427 DBIP07108 87 aaKnown RBP-1.95□□□□□ -2.72
PDE6C-202ENST00000475427 ACYP1P07311 99 aa-1.95□□□□□ -2.72
PDE6C-202ENST00000475427 TFAMQ00059 246 aaKnown RBP-1.95□□□□□ -2.72
PDE6C-202ENST00000475427 ANP32BQ92688 251 aaKnown RBP-1.95□□□□□ -2.72
PDE6C-202ENST00000475427 AIF1LQ9BQI0 150 aa-1.95□□□□□ -2.72
PDE6C-202ENST00000475427 RERGLQ9H628 205 aa-1.95□□□□□ -2.72
PDE6C-202ENST00000475427 CFAP47Q6ZTR5 3102 aa-1.95□□□□□ -2.72
PDE6C-202ENST00000475427 DNMBPQ6XZF7 1577 aa-1.95□□□□□ -2.72
PDE6C-202ENST00000475427 CFTRP13569 1480 aa-1.95□□□□□ -2.72
PDE6C-202ENST00000475427 ITSN2Q9NZM3 1697 aa-1.96□□□□□ -2.72
PDE6C-202ENST00000475427 J3QR89 54 aa-1.96□□□□□ -2.72
PDE6C-202ENST00000475427 K7ERU9 68 aa-1.96□□□□□ -2.72
PDE6C-202ENST00000475427 M0QY20 66 aa-1.96□□□□□ -2.72
PDE6C-202ENST00000475427 LEPROTL1O95214 131 aa-1.96□□□□□ -2.72
PDE6C-202ENST00000475427 TSPAN19P0C672 248 aa-1.96□□□□□ -2.72
PDE6C-202ENST00000475427 MORN2Q502X0 79 aa-1.96□□□□□ -2.72
PDE6C-202ENST00000475427 PDCD10Q9BUL8 212 aa-1.96□□□□□ -2.72
PDE6C-202ENST00000475427 ROBO1Q9Y6N7 1651 aa-1.96□□□□□ -2.72
PDE6C-202ENST00000475427 LRRC7Q96NW7 1537 aa-1.96□□□□□ -2.72
PDE6C-202ENST00000475427 NWD1Q149M9 1564 aa-1.97□□□□□ -2.72
PDE6C-202ENST00000475427 TMEM262E9PQX1 116 aa-1.97□□□□□ -2.72
PDE6C-202ENST00000475427 CCDC153Q494R4 210 aa-1.97□□□□□ -2.72
PDE6C-202ENST00000475427 TRIQKQ629K1 86 aa-1.97□□□□□ -2.72
PDE6C-202ENST00000475427 C8orf59Q8N0T1 100 aaPredicted RBP-1.97□□□□□ -2.72
PDE6C-202ENST00000475427 COPS9Q8WXC6 57 aa-1.97□□□□□ -2.72
PDE6C-202ENST00000475427 GAFA1Q96PS6 74 aa-1.97□□□□□ -2.72
PDE6C-202ENST00000475427 GID8Q9NWU2 228 aa-1.97□□□□□ -2.72
PDE6C-202ENST00000475427 KIF1AQ12756 1690 aa-1.97□□□□□ -2.73
PDE6C-202ENST00000475427 ERVK-7P63135 1459 aa-1.98□□□□□ -2.73
PDE6C-202ENST00000475427 LCE6AA0A183 80 aa-1.98□□□□□ -2.73
PDE6C-202ENST00000475427 TMEM218A2RU14 115 aa-1.98□□□□□ -2.73
PDE6C-202ENST00000475427 MIF4GDA9UHW6 222 aaKnown RBP-1.98□□□□□ -2.73
PDE6C-202ENST00000475427 S100GP29377 79 aa-1.98□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms