RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 LGALS3P17931 250 aaKnown RBP7.54□□□□□ -1.2
CHD3-209ENST00000473376 TRGC2P03986 189 aa7.53□□□□□ -1.2
CHD3-209ENST00000473376 HINT1P49773 126 aaPredicted RBP7.53□□□□□ -1.2
CHD3-209ENST00000473376 LINC00310P59036 64 aa7.53□□□□□ -1.2
CHD3-209ENST00000473376 SLC25A34Q6PIV7 304 aa7.53□□□□□ -1.2
CHD3-209ENST00000473376 H0Y8G0 127 aa7.52□□□□□ -1.21
CHD3-209ENST00000473376 SERF1AO75920 110 aa7.52□□□□□ -1.21
CHD3-209ENST00000473376 SPRR1BP22528 89 aa7.51□□□□□ -1.21
CHD3-209ENST00000473376 E9PLD3 99 aa7.5□□□□□ -1.21
CHD3-209ENST00000473376 A0A0J9YXY3 114 aa7.49□□□□□ -1.21
CHD3-209ENST00000473376 LCE2DQ5TA82 110 aaPredicted RBP7.49□□□□□ -1.21
CHD3-209ENST00000473376 KRTAP4-1Q9BYQ7 146 aa7.49□□□□□ -1.21
CHD3-209ENST00000473376 SPANXCQ9NY87 97 aa7.49□□□□□ -1.21
CHD3-209ENST00000473376 DHRS4-AS1Q9P1J3 65 aa7.49□□□□□ -1.21
CHD3-209ENST00000473376 TIMM17BO60830 172 aa7.48□□□□□ -1.21
CHD3-209ENST00000473376 ADAMTSL4-AS1Q5T5F5 129 aa7.48□□□□□ -1.21
CHD3-209ENST00000473376 C9orf153Q5TBE3 101 aa7.48□□□□□ -1.21
CHD3-209ENST00000473376 SOSTDC1Q6X4U4 206 aa7.48□□□□□ -1.21
CHD3-209ENST00000473376 LIMD2Q9BT23 127 aa7.48□□□□□ -1.21
CHD3-209ENST00000473376 FABP4P15090 132 aa7.47□□□□□ -1.21
CHD3-209ENST00000473376 CD164Q04900 197 aa7.46□□□□□ -1.22
CHD3-209ENST00000473376 EIF4EBP3O60516 100 aaPredicted RBP7.45□□□□□ -1.22
CHD3-209ENST00000473376 LINC00518Q8N0U6 118 aa7.45□□□□□ -1.22
CHD3-209ENST00000473376 SPANXDQ9BXN6 97 aa7.45□□□□□ -1.22
CHD3-209ENST00000473376 ST20-AS1Q8NBB2 130 aa7.44□□□□□ -1.22
CHD3-209ENST00000473376 LINC00308Q8TCZ7 52 aa7.44□□□□□ -1.22
CHD3-209ENST00000473376 LITAFQ99732 161 aa7.44□□□□□ -1.22
CHD3-209ENST00000473376 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
CHD3-209ENST00000473376 LAMTOR3Q9UHA4 124 aa7.44□□□□□ -1.22
CHD3-209ENST00000473376 TRBV7-6A0A0J9YX20 115 aa7.43□□□□□ -1.22
CHD3-209ENST00000473376 Q5XG85 94 aa7.43□□□□□ -1.22
CHD3-209ENST00000473376 COLCA2A8K830 154 aa7.42□□□□□ -1.22
CHD3-209ENST00000473376 SYS1-DBNDD2H3BUS1 97 aa7.41□□□□□ -1.22
CHD3-209ENST00000473376 ELOF1P60002 83 aaKnown RBP7.41□□□□□ -1.22
CHD3-209ENST00000473376 NPC2P61916 151 aa7.4□□□□□ -1.22
CHD3-209ENST00000473376 LCE2CQ5TA81 110 aa7.4□□□□□ -1.22
CHD3-209ENST00000473376 LINC01545Q5VT33 79 aa7.4□□□□□ -1.22
CHD3-209ENST00000473376 OR13C6PQ8NH95 151 aa7.4□□□□□ -1.22
CHD3-209ENST00000473376 PET117Q6UWS5 81 aa7.39□□□□□ -1.23
CHD3-209ENST00000473376 COPS9Q8WXC6 57 aa7.39□□□□□ -1.23
CHD3-209ENST00000473376 PRO1933Q9H354 126 aa7.39□□□□□ -1.23
CHD3-209ENST00000473376 TEX49A0A1B0GTD5 131 aa7.38□□□□□ -1.23
CHD3-209ENST00000473376 COX7BP24311 80 aa7.38□□□□□ -1.23
CHD3-209ENST00000473376 CFC1BP0CG36 223 aa7.37□□□□□ -1.23
CHD3-209ENST00000473376 KRTAP19-2Q3LHN2 52 aa7.37□□□□□ -1.23
CHD3-209ENST00000473376 ZNF815PA8K554 130 aa7.36□□□□□ -1.23
CHD3-209ENST00000473376 TAL2Q16559 108 aa7.36□□□□□ -1.23
CHD3-209ENST00000473376 C6orf99Q4VX62 202 aa7.36□□□□□ -1.23
CHD3-209ENST00000473376 A0A1B0GWB2 263 aa7.35□□□□□ -1.23
CHD3-209ENST00000473376 A4D1N5 150 aa7.35□□□□□ -1.23
CHD3-209ENST00000473376 IFITM1P13164 125 aa7.35□□□□□ -1.23
CHD3-209ENST00000473376 AKR1D1P51857 326 aa7.35□□□□□ -1.23
CHD3-209ENST00000473376 Q6ZVH6 145 aa7.35□□□□□ -1.23
CHD3-209ENST00000473376 IGLV5-48A0A075B6I7 105 aa7.34□□□□□ -1.23
CHD3-209ENST00000473376 H7C2G1 150 aa7.34□□□□□ -1.23
CHD3-209ENST00000473376 PCOTHQ58A44 107 aa7.34□□□□□ -1.23
CHD3-209ENST00000473376 IGLV8-61A0A075B6I0 122 aa7.33□□□□□ -1.24
CHD3-209ENST00000473376 HIST1H2BKO60814 126 aa7.33□□□□□ -1.24
CHD3-209ENST00000473376 HIST1H2BJP06899 126 aa7.33□□□□□ -1.24
CHD3-209ENST00000473376 HIST1H2BOP23527 126 aa7.33□□□□□ -1.24
CHD3-209ENST00000473376 HIST1H2BBP33778 126 aa7.33□□□□□ -1.24
CHD3-209ENST00000473376 HIST1H2BDP58876 126 aa7.33□□□□□ -1.24
CHD3-209ENST00000473376 HIST1H2BCP62807 126 aa7.33□□□□□ -1.24
CHD3-209ENST00000473376 HIST2H2BEQ16778 126 aa7.33□□□□□ -1.24
CHD3-209ENST00000473376 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.33□□□□□ -1.24
CHD3-209ENST00000473376 HIST1H2BHQ93079 126 aa7.33□□□□□ -1.24
CHD3-209ENST00000473376 HIST1H2BNQ99877 126 aa7.33□□□□□ -1.24
CHD3-209ENST00000473376 HIST1H2BMQ99879 126 aa7.33□□□□□ -1.24
CHD3-209ENST00000473376 HRCT1Q6UXD1 115 aa7.32□□□□□ -1.24
CHD3-209ENST00000473376 SMIM29Q86T20 159 aa7.32□□□□□ -1.24
CHD3-209ENST00000473376 MT1HP80294 61 aa7.31□□□□□ -1.24
CHD3-209ENST00000473376 CRCT1Q9UGL9 99 aa7.31□□□□□ -1.24
CHD3-209ENST00000473376 Q1RN00 199 aa7.3□□□□□ -1.24
CHD3-209ENST00000473376 COA6Q5JTJ3 125 aaKnown RBP7.3□□□□□ -1.24
CHD3-209ENST00000473376 NHP2Q9NX24 153 aaKnown RBP7.3□□□□□ -1.24
CHD3-209ENST00000473376 C9orf92A6NGG3 77 aa7.29□□□□□ -1.24
CHD3-209ENST00000473376 C1orf195Q5TG92 126 aa7.29□□□□□ -1.24
CHD3-209ENST00000473376 SCGB1D4Q6XE38 83 aa7.29□□□□□ -1.24
CHD3-209ENST00000473376 DEFB105AQ8NG35 78 aa7.29□□□□□ -1.24
CHD3-209ENST00000473376 C3orf79P0CE67 100 aa7.28□□□□□ -1.24
CHD3-209ENST00000473376 TRAV13-2A0A0B4J235 113 aa7.27□□□□□ -1.25
CHD3-209ENST00000473376 C20orf202A1L168 122 aa7.27□□□□□ -1.25
CHD3-209ENST00000473376 SLC7A5P1Q8MH63 180 aa7.27□□□□□ -1.25
CHD3-209ENST00000473376 TTTY13Q9BZ97 58 aa7.27□□□□□ -1.25
CHD3-209ENST00000473376 TCL1BO95988 128 aa7.26□□□□□ -1.25
CHD3-209ENST00000473376 RPL37P61927 97 aaKnown RBP7.26□□□□□ -1.25
CHD3-209ENST00000473376 A6NDN8 102 aa7.25□□□□□ -1.25
CHD3-209ENST00000473376 SNRPEP62304 92 aaKnown RBP7.25□□□□□ -1.25
CHD3-209ENST00000473376 FSIP2Q5CZC0 6907 aa7.24□□□□□ -1.25
CHD3-209ENST00000473376 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
CHD3-209ENST00000473376 KRTDAPP60985 99 aa7.22□□□□□ -1.25
CHD3-209ENST00000473376 VAMP3Q15836 100 aa7.22□□□□□ -1.25
CHD3-209ENST00000473376 MUSTN1Q8IVN3 82 aa7.22□□□□□ -1.25
CHD3-209ENST00000473376 Q6JHZ5 121 aa7.21□□□□□ -1.26
CHD3-209ENST00000473376 KRTAP10-6P60371 365 aaPredicted RBP7.2□□□□□ -1.26
CHD3-209ENST00000473376 ANKRD39Q53RE8 183 aa7.2□□□□□ -1.26
CHD3-209ENST00000473376 SMIM11BQ8TCY0 68 aa7.2□□□□□ -1.26
CHD3-209ENST00000473376 F8WEM9 126 aa7.19□□□□□ -1.26
CHD3-209ENST00000473376 LINC00575Q6W349 94 aa7.17□□□□□ -1.26
CHD3-209ENST00000473376 PCP2Q8IVA1 136 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms