RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 CHTF8P0CG12 524 aa8.14□□□□□ -1.11
VPS13D-205ENST00000473099 KRTAP7-1Q8IUC3 87 aa8.14□□□□□ -1.11
VPS13D-205ENST00000473099 HECTD4Q9Y4D8 3996 aa8.13□□□□□ -1.11
VPS13D-205ENST00000473099 A0A1W2PNN7 141 aa8.13□□□□□ -1.11
VPS13D-205ENST00000473099 DNAL4O96015 105 aa8.13□□□□□ -1.11
VPS13D-205ENST00000473099 COX7BP24311 80 aa8.13□□□□□ -1.11
VPS13D-205ENST00000473099 EPM2AB3EWF7 344 aa8.12□□□□□ -1.11
VPS13D-205ENST00000473099 C9JAW5 83 aa8.12□□□□□ -1.11
VPS13D-205ENST00000473099 SLC25A20O43772 301 aa8.12□□□□□ -1.11
VPS13D-205ENST00000473099 ELOF1P60002 83 aaKnown RBP8.12□□□□□ -1.11
VPS13D-205ENST00000473099 DPH3Q96FX2 82 aa8.12□□□□□ -1.11
VPS13D-205ENST00000473099 DNAH17Q9UFH2 4485 aa8.12□□□□□ -1.11
VPS13D-205ENST00000473099 H3BT86 120 aa8.11□□□□□ -1.11
VPS13D-205ENST00000473099 FAM218AQ96MZ4 157 aa8.11□□□□□ -1.11
VPS13D-205ENST00000473099 PRO0461Q9UI25 63 aa8.11□□□□□ -1.11
VPS13D-205ENST00000473099 RPL37AP8A6NKH3 93 aa8.1□□□□□ -1.11
VPS13D-205ENST00000473099 SPRR1AP35321 89 aa8.1□□□□□ -1.11
VPS13D-205ENST00000473099 LINC00575Q6W349 94 aa8.1□□□□□ -1.11
VPS13D-205ENST00000473099 LINC01600Q96MT4 127 aa8.1□□□□□ -1.11
VPS13D-205ENST00000473099 A0A087WYN8 130 aa8.09□□□□□ -1.11
VPS13D-205ENST00000473099 ETDCA0A1B0GVM5 59 aa8.09□□□□□ -1.11
VPS13D-205ENST00000473099 H3BQ85 93 aa8.09□□□□□ -1.11
VPS13D-205ENST00000473099 GHRHP01286 108 aa8.09□□□□□ -1.11
VPS13D-205ENST00000473099 INAFM2P0DMQ5 153 aa8.09□□□□□ -1.11
VPS13D-205ENST00000473099 REG3GQ6UW15 175 aa8.09□□□□□ -1.11
VPS13D-205ENST00000473099 PLAC8Q9NZF1 115 aa8.09□□□□□ -1.11
VPS13D-205ENST00000473099 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.09□□□□□ -1.11
VPS13D-205ENST00000473099 hADV29S1A0JD25 119 aa8.08□□□□□ -1.12
VPS13D-205ENST00000473099 KRTAP10-2P60368 255 aa8.08□□□□□ -1.12
VPS13D-205ENST00000473099 UBE2BP63146 152 aa8.08□□□□□ -1.12
VPS13D-205ENST00000473099 KRTAP4-16G5E9R7 235 aaPredicted RBP8.07□□□□□ -1.12
VPS13D-205ENST00000473099 PANO1I0J062 215 aa8.07□□□□□ -1.12
VPS13D-205ENST00000473099 LINC00528Q8N1L1 170 aa8.07□□□□□ -1.12
VPS13D-205ENST00000473099 ANKRD29Q8N6D5 301 aa8.07□□□□□ -1.12
VPS13D-205ENST00000473099 FUSP35637 526 aaKnown RBP eCLIP8.06□□□□□ -1.12
VPS13D-205ENST00000473099 OCIAD2Q56VL3 154 aa8.06□□□□□ -1.12
VPS13D-205ENST00000473099 Q6ZRX8 168 aa8.06□□□□□ -1.12
VPS13D-205ENST00000473099 PHF5AQ7RTV0 110 aaKnown RBP8.06□□□□□ -1.12
VPS13D-205ENST00000473099 ORMDL1Q9P0S3 153 aa8.06□□□□□ -1.12
VPS13D-205ENST00000473099 DHRS4-AS1Q9P1J3 65 aa8.06□□□□□ -1.12
VPS13D-205ENST00000473099 B5MCH6 92 aa8.05□□□□□ -1.12
VPS13D-205ENST00000473099 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.05□□□□□ -1.12
VPS13D-205ENST00000473099 MTURNQ8N3F0 131 aa8.05□□□□□ -1.12
VPS13D-205ENST00000473099 BAALC-AS2P0C853 105 aa8.04□□□□□ -1.12
VPS13D-205ENST00000473099 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
VPS13D-205ENST00000473099 Q6ZSA8 131 aa8.03□□□□□ -1.12
VPS13D-205ENST00000473099 TEN1Q86WV5 123 aa8.03□□□□□ -1.12
VPS13D-205ENST00000473099 H0Y9J4 135 aa8.02□□□□□ -1.13
VPS13D-205ENST00000473099 TMEM256-PLSCR3K7ERE1 68 aa8.02□□□□□ -1.13
VPS13D-205ENST00000473099 ETDBQ3ZM63 59 aa8.01□□□□□ -1.13
VPS13D-205ENST00000473099 Q6ZQY7 126 aa8□□□□□ -1.13
VPS13D-205ENST00000473099 FAM19A1Q7Z5A9 133 aa8□□□□□ -1.13
VPS13D-205ENST00000473099 BCE1O60756 84 aa7.99□□□□□ -1.13
VPS13D-205ENST00000473099 KRTAP10-1P60331 282 aa7.99□□□□□ -1.13
VPS13D-205ENST00000473099 PPDPFLQ8WWR9 84 aa7.99□□□□□ -1.13
VPS13D-205ENST00000473099 A0A1B0GVY2 172 aa7.98□□□□□ -1.13
VPS13D-205ENST00000473099 FAT2Q9NYQ8 4349 aa7.98□□□□□ -1.13
VPS13D-205ENST00000473099 J3QR89 54 aa7.97□□□□□ -1.13
VPS13D-205ENST00000473099 UBE2AP49459 152 aa7.97□□□□□ -1.13
VPS13D-205ENST00000473099 Q9BRP9 147 aa7.97□□□□□ -1.13
VPS13D-205ENST00000473099 DNAH11Q96DT5 4516 aa7.97□□□□□ -1.13
VPS13D-205ENST00000473099 PKD1P98161 4303 aa7.97□□□□□ -1.13
VPS13D-205ENST00000473099 KRTAP11-1Q8IUC1 163 aa7.96□□□□□ -1.14
VPS13D-205ENST00000473099 CIRBP-AS1Q8TBR5 109 aa7.96□□□□□ -1.14
VPS13D-205ENST00000473099 FAM30AQ9NZY2 134 aa7.96□□□□□ -1.14
VPS13D-205ENST00000473099 DNAH5Q8TE73 4624 aa7.95□□□□□ -1.14
VPS13D-205ENST00000473099 JMJD7-PLA2G4BH0Y9G9 81 aa7.95□□□□□ -1.14
VPS13D-205ENST00000473099 K7ERU9 68 aa7.95□□□□□ -1.14
VPS13D-205ENST00000473099 SCXQ7RTU7 201 aa7.95□□□□□ -1.14
VPS13D-205ENST00000473099 PRLHP81277 87 aa7.94□□□□□ -1.14
VPS13D-205ENST00000473099 SMCR5Q8TEV8 140 aa7.94□□□□□ -1.14
VPS13D-205ENST00000473099 PSORS1C2Q9UIG4 136 aa7.94□□□□□ -1.14
VPS13D-205ENST00000473099 IGLV5-48A0A075B6I7 105 aa7.92□□□□□ -1.14
VPS13D-205ENST00000473099 TEX49A0A1B0GTD5 131 aa7.92□□□□□ -1.14
VPS13D-205ENST00000473099 KRTAP13-1Q8IUC0 172 aa7.92□□□□□ -1.14
VPS13D-205ENST00000473099 HIGD2AQ9BW72 106 aa7.92□□□□□ -1.14
VPS13D-205ENST00000473099 DNAH8Q96JB1 4490 aa7.91□□□□□ -1.14
VPS13D-205ENST00000473099 C21orf62-AS1Q17RA5 79 aa7.91□□□□□ -1.14
VPS13D-205ENST00000473099 C1orf137Q5JT78 98 aa7.91□□□□□ -1.14
VPS13D-205ENST00000473099 OBSCN-AS1Q96MR7 158 aa7.91□□□□□ -1.14
VPS13D-205ENST00000473099 LAMTOR3Q9UHA4 124 aa7.91□□□□□ -1.14
VPS13D-205ENST00000473099 ERC2-IT1O76042 136 aa7.89□□□□□ -1.15
VPS13D-205ENST00000473099 NDUFV3P56181 108 aaKnown RBP7.89□□□□□ -1.15
VPS13D-205ENST00000473099 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
VPS13D-205ENST00000473099 ZNF861PO60384 105 aa7.88□□□□□ -1.15
VPS13D-205ENST00000473099 LINC01547P58512 204 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-205ENST00000473099 RBM3P98179 157 aaKnown RBP7.88□□□□□ -1.15
VPS13D-205ENST00000473099 Q8N377 158 aa7.88□□□□□ -1.15
VPS13D-205ENST00000473099 DEFB105AQ8NG35 78 aa7.88□□□□□ -1.15
VPS13D-205ENST00000473099 ZNF706Q9Y5V0 76 aaPredicted RBP7.88□□□□□ -1.15
VPS13D-205ENST00000473099 IGLV7-43P04211 117 aa7.87□□□□□ -1.15
VPS13D-205ENST00000473099 PDE6GP18545 87 aa7.87□□□□□ -1.15
VPS13D-205ENST00000473099 SPRR1BP22528 89 aa7.86□□□□□ -1.15
VPS13D-205ENST00000473099 ST20-AS1Q8NBB2 130 aa7.86□□□□□ -1.15
VPS13D-205ENST00000473099 HERC2O95714 4834 aa7.86□□□□□ -1.15
VPS13D-205ENST00000473099 DSCR8Q96T75 97 aa7.85□□□□□ -1.15
VPS13D-205ENST00000473099 PKHD1P08F94 4074 aa7.84□□□□□ -1.15
VPS13D-205ENST00000473099 LOC110117498A0A087WWA1 95 aa7.84□□□□□ -1.15
VPS13D-205ENST00000473099 FAM240AA0A1B0GVK7 77 aa7.84□□□□□ -1.15
VPS13D-205ENST00000473099 F8WEM9 126 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms