RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 SPRR4Q96PI1 79 aa1.99□□□□□ -2.09
XRN1-209ENST00000472625 MAP1LC3CQ9BXW4 147 aa1.99□□□□□ -2.09
XRN1-209ENST00000472625 CST9LQ9H4G1 147 aa1.99□□□□□ -2.09
XRN1-209ENST00000472625 SND1-IT1Q9HBX3 110 aa1.99□□□□□ -2.09
XRN1-209ENST00000472625 LINC01546A6NGU7 62 aa1.98□□□□□ -2.09
XRN1-209ENST00000472625 TMEM238C9JI98 176 aa1.98□□□□□ -2.09
XRN1-209ENST00000472625 HBDP02042 147 aa1.98□□□□□ -2.09
XRN1-209ENST00000472625 KRTAP12-2P59991 146 aa1.98□□□□□ -2.09
XRN1-209ENST00000472625 HERV-K104P63124 156 aa1.98□□□□□ -2.09
XRN1-209ENST00000472625 IFITM2Q01629 132 aa1.98□□□□□ -2.09
XRN1-209ENST00000472625 KRTAP13-3Q3SY46 172 aa1.98□□□□□ -2.09
XRN1-209ENST00000472625 SLC25A34Q6PIV7 304 aa1.98□□□□□ -2.09
XRN1-209ENST00000472625 COMMD7Q86VX2 200 aa1.98□□□□□ -2.09
XRN1-209ENST00000472625 Q8NBF4 154 aa1.98□□□□□ -2.09
XRN1-209ENST00000472625 MIEN1Q9BRT3 115 aa1.98□□□□□ -2.09
XRN1-209ENST00000472625 LIMD2Q9BT23 127 aa1.98□□□□□ -2.09
XRN1-209ENST00000472625 ANAPC11Q9NYG5 84 aa1.98□□□□□ -2.09
XRN1-209ENST00000472625 C5orf52A6NGY3 159 aa1.97□□□□□ -2.09
XRN1-209ENST00000472625 C9JQL5 133 aa1.97□□□□□ -2.09
XRN1-209ENST00000472625 NDUFA6P56556 154 aa1.97□□□□□ -2.09
XRN1-209ENST00000472625 LINC00158P58513 81 aa1.97□□□□□ -2.09
XRN1-209ENST00000472625 LINC00483Q53H64 154 aa1.97□□□□□ -2.09
XRN1-209ENST00000472625 MEIG1Q5JSS6 88 aa1.97□□□□□ -2.09
XRN1-209ENST00000472625 TMEM170BQ5T4T1 132 aa1.97□□□□□ -2.09
XRN1-209ENST00000472625 LCE3AQ5TA76 89 aa1.97□□□□□ -2.09
XRN1-209ENST00000472625 UQCC3Q6UW78 93 aa1.97□□□□□ -2.09
XRN1-209ENST00000472625 SSBP3-AS1Q7Z2R9 100 aa1.97□□□□□ -2.09
XRN1-209ENST00000472625 SEC11CQ9BY50 192 aa1.97□□□□□ -2.09
XRN1-209ENST00000472625 KCNQ1DNQ9H478 68 aa1.97□□□□□ -2.09
XRN1-209ENST00000472625 TRBV10-2A0A0K0K1G8 114 aa1.96□□□□□ -2.1
XRN1-209ENST00000472625 MYMXA0A1B0GTQ4 84 aa1.96□□□□□ -2.1
XRN1-209ENST00000472625 ZNF22P17026 224 aaPredicted RBP1.96□□□□□ -2.1
XRN1-209ENST00000472625 ADCYAP1P18509 176 aa1.96□□□□□ -2.1
XRN1-209ENST00000472625 SPRR1AP35321 89 aa1.96□□□□□ -2.1
XRN1-209ENST00000472625 HINT1P49773 126 aaPredicted RBP1.96□□□□□ -2.1
XRN1-209ENST00000472625 BOD1L2Q8IYS8 172 aa1.96□□□□□ -2.1
XRN1-209ENST00000472625 C3orf22Q8N5N4 141 aa1.96□□□□□ -2.1
XRN1-209ENST00000472625 ZNF625Q96I27 306 aaPredicted RBP1.96□□□□□ -2.1
XRN1-209ENST00000472625 SPANXB1Q9NS25 103 aaPredicted RBP1.96□□□□□ -2.1
XRN1-209ENST00000472625 TRAV12-1A0A0B4J245 112 aa1.95□□□□□ -2.1
XRN1-209ENST00000472625 SCO1O75880 301 aa1.95□□□□□ -2.1
XRN1-209ENST00000472625 LINC00614P0C842 121 aa1.95□□□□□ -2.1
XRN1-209ENST00000472625 NMUP48645 174 aa1.95□□□□□ -2.1
XRN1-209ENST00000472625 FABP9Q0Z7S8 132 aa1.95□□□□□ -2.1
XRN1-209ENST00000472625 MOBPQ13875 183 aa1.95□□□□□ -2.1
XRN1-209ENST00000472625 RHEBQ15382 184 aa1.95□□□□□ -2.1
XRN1-209ENST00000472625 S100A7L2Q5SY68 101 aa1.95□□□□□ -2.1
XRN1-209ENST00000472625 C9orf153Q5TBE3 101 aa1.95□□□□□ -2.1
XRN1-209ENST00000472625 Q6ZRX8 168 aa1.95□□□□□ -2.1
XRN1-209ENST00000472625 BAGE3Q86Y29 109 aa1.95□□□□□ -2.1
XRN1-209ENST00000472625 CRCT1Q9UGL9 99 aa1.95□□□□□ -2.1
XRN1-209ENST00000472625 CHTOPQ9Y3Y2 248 aaKnown RBP1.95□□□□□ -2.1
XRN1-209ENST00000472625 TRAV23DV6A0A075B6W5 121 aa1.94□□□□□ -2.1
XRN1-209ENST00000472625 TRBV10-3A0A0K0K1G6 114 aa1.94□□□□□ -2.1
XRN1-209ENST00000472625 C11orf86A6NJI1 115 aa1.94□□□□□ -2.1
XRN1-209ENST00000472625 NCR3O14931 201 aa1.94□□□□□ -2.1
XRN1-209ENST00000472625 NDUFC2O95298 119 aa1.94□□□□□ -2.1
XRN1-209ENST00000472625 PLNP26678 52 aa1.94□□□□□ -2.1
XRN1-209ENST00000472625 DDTP30046 118 aa1.94□□□□□ -2.1
XRN1-209ENST00000472625 HERVK_113P61574 105 aa1.94□□□□□ -2.1
XRN1-209ENST00000472625 CLLU1Q5K131 121 aa1.94□□□□□ -2.1
XRN1-209ENST00000472625 MIR7-3HGQ8N6C7 128 aa1.94□□□□□ -2.1
XRN1-209ENST00000472625 SMCR5Q8TEV8 140 aa1.94□□□□□ -2.1
XRN1-209ENST00000472625 CHCHD1Q96BP2 118 aaKnown RBP1.94□□□□□ -2.1
XRN1-209ENST00000472625 LOC107984156A0A0G2JMH3 177 aa1.93□□□□□ -2.1
XRN1-209ENST00000472625 TMEM223A0PJW6 202 aa1.93□□□□□ -2.1
XRN1-209ENST00000472625 TMEM218A2RU14 115 aa1.93□□□□□ -2.1
XRN1-209ENST00000472625 KRTAP4-16G5E9R7 235 aaPredicted RBP1.93□□□□□ -2.1
XRN1-209ENST00000472625 SMIM13P0DJ93 91 aa1.93□□□□□ -2.1
XRN1-209ENST00000472625 NDUFA5Q16718 116 aa1.93□□□□□ -2.1
XRN1-209ENST00000472625 ARL17AQ8IVW1 177 aa1.93□□□□□ -2.1
XRN1-209ENST00000472625 C18orf32Q8TCD1 76 aa1.93□□□□□ -2.1
XRN1-209ENST00000472625 DHRS4-AS1Q9P1J3 65 aa1.93□□□□□ -2.1
XRN1-209ENST00000472625 LAMTOR3Q9UHA4 124 aa1.93□□□□□ -2.1
XRN1-209ENST00000472625 TRAPPC1Q9Y5R8 145 aa1.93□□□□□ -2.1
XRN1-209ENST00000472625 IGLV8-61A0A075B6I0 122 aa1.92□□□□□ -2.1
XRN1-209ENST00000472625 A0A096LNJ9 63 aa1.92□□□□□ -2.1
XRN1-209ENST00000472625 A0A0U1RRA0 63 aa1.92□□□□□ -2.1
XRN1-209ENST00000472625 M0R2T5 61 aa1.92□□□□□ -2.1
XRN1-209ENST00000472625 ZNF73O43830 326 aaPredicted RBP1.92□□□□□ -2.1
XRN1-209ENST00000472625 HSBP1O75506 76 aa1.92□□□□□ -2.1
XRN1-209ENST00000472625 IGLV6-57P01721 117 aa1.92□□□□□ -2.1
XRN1-209ENST00000472625 CD164Q04900 197 aa1.92□□□□□ -2.1
XRN1-209ENST00000472625 COX6B2Q6YFQ2 88 aa1.92□□□□□ -2.1
XRN1-209ENST00000472625 COPS9Q8WXC6 57 aa1.92□□□□□ -2.1
XRN1-209ENST00000472625 IFI27L1Q96BM0 104 aa1.92□□□□□ -2.1
XRN1-209ENST00000472625 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
XRN1-209ENST00000472625 SNAPINO95295 136 aa1.91□□□□□ -2.1
XRN1-209ENST00000472625 LGALS3P17931 250 aaKnown RBP1.91□□□□□ -2.1
XRN1-209ENST00000472625 SVBPQ8N300 66 aa1.91□□□□□ -2.1
XRN1-209ENST00000472625 Q8NDZ9 215 aa1.91□□□□□ -2.1
XRN1-209ENST00000472625 Q9BRP9 147 aa1.91□□□□□ -2.1
XRN1-209ENST00000472625 PRO1933Q9H354 126 aa1.91□□□□□ -2.1
XRN1-209ENST00000472625 NHP2Q9NX24 153 aaKnown RBP1.91□□□□□ -2.1
XRN1-209ENST00000472625 SPANXCQ9NY87 97 aa1.91□□□□□ -2.1
XRN1-209ENST00000472625 HSPB8Q9UJY1 196 aa1.91□□□□□ -2.1
XRN1-209ENST00000472625 FLGP20930 4061 aaPredicted RBP1.9□□□□□ -2.1
XRN1-209ENST00000472625 H7C2G1 150 aa1.9□□□□□ -2.11
XRN1-209ENST00000472625 J3QQQ9 107 aa1.9□□□□□ -2.11
XRN1-209ENST00000472625 LEPROTO15243 131 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms