RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 PSORS1C2Q9UIG4 136 aa4.13□□□□□ -1.75
SCN9A-206ENST00000472119 RPL37AP8A6NKH3 93 aa4.12□□□□□ -1.75
SCN9A-206ENST00000472119 VPREB1P12018 145 aa4.12□□□□□ -1.75
SCN9A-206ENST00000472119 PRR3P79522 188 aaKnown RBP4.12□□□□□ -1.75
SCN9A-206ENST00000472119 LBHQ53QV2 105 aaPredicted RBP4.12□□□□□ -1.75
SCN9A-206ENST00000472119 C1orf137Q5JT78 98 aa4.12□□□□□ -1.75
SCN9A-206ENST00000472119 ADAMTSL4-AS1Q5T5F5 129 aa4.12□□□□□ -1.75
SCN9A-206ENST00000472119 MRPL55Q7Z7F7 128 aaKnown RBP4.12□□□□□ -1.75
SCN9A-206ENST00000472119 PCP2Q8IVA1 136 aa4.12□□□□□ -1.75
SCN9A-206ENST00000472119 NKAPP1Q8N9T2 125 aa4.12□□□□□ -1.75
SCN9A-206ENST00000472119 LINC00167Q96N53 147 aa4.12□□□□□ -1.75
SCN9A-206ENST00000472119 HSBP1L1C9JCN9 74 aa4.11□□□□□ -1.75
SCN9A-206ENST00000472119 NPC2P61916 151 aa4.11□□□□□ -1.75
SCN9A-206ENST00000472119 RPL24P83731 157 aaKnown RBP4.11□□□□□ -1.75
SCN9A-206ENST00000472119 BOD1L2Q8IYS8 172 aa4.11□□□□□ -1.75
SCN9A-206ENST00000472119 TP73-AS1Q9UF72 201 aa4.11□□□□□ -1.75
SCN9A-206ENST00000472119 FLG2Q5D862 2391 aaPredicted RBP4.11□□□□□ -1.75
SCN9A-206ENST00000472119 DSCR10P59022 87 aa4.1□□□□□ -1.75
SCN9A-206ENST00000472119 SOSTDC1Q6X4U4 206 aa4.1□□□□□ -1.75
SCN9A-206ENST00000472119 SCGB1D4Q6XE38 83 aa4.1□□□□□ -1.75
SCN9A-206ENST00000472119 LITAFQ99732 161 aa4.1□□□□□ -1.75
SCN9A-206ENST00000472119 IGKV2-28A0A075B6P5 120 aa4.09□□□□□ -1.75
SCN9A-206ENST00000472119 NCR3O14931 201 aa4.09□□□□□ -1.75
SCN9A-206ENST00000472119 IGKV2D-28P01615 120 aa4.09□□□□□ -1.75
SCN9A-206ENST00000472119 JOSD1Q15040 202 aaPredicted RBP4.09□□□□□ -1.75
SCN9A-206ENST00000472119 MIEN1Q9BRT3 115 aa4.09□□□□□ -1.75
SCN9A-206ENST00000472119 IGLV1-50A0A075B6I6 118 aa4.08□□□□□ -1.76
SCN9A-206ENST00000472119 LOC107984156A0A0G2JMH3 177 aa4.08□□□□□ -1.76
SCN9A-206ENST00000472119 M0R378 163 aa4.08□□□□□ -1.76
SCN9A-206ENST00000472119 TIMM17BO60830 172 aa4.08□□□□□ -1.76
SCN9A-206ENST00000472119 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
SCN9A-206ENST00000472119 IGLV7-43P04211 117 aa4.08□□□□□ -1.76
SCN9A-206ENST00000472119 SRSF9Q13242 221 aaKnown RBP eCLIP4.08□□□□□ -1.76
SCN9A-206ENST00000472119 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
SCN9A-206ENST00000472119 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
SCN9A-206ENST00000472119 ARL17AQ8IVW1 177 aa4.08□□□□□ -1.76
SCN9A-206ENST00000472119 LINC00308Q8TCZ7 52 aa4.08□□□□□ -1.76
SCN9A-206ENST00000472119 PAM16Q9Y3D7 125 aa4.08□□□□□ -1.76
SCN9A-206ENST00000472119 PKHD1L1Q86WI1 4243 aa4.08□□□□□ -1.76
SCN9A-206ENST00000472119 TMEM238C9JI98 176 aa4.07□□□□□ -1.76
SCN9A-206ENST00000472119 SPATA45Q537H7 98 aa4.07□□□□□ -1.76
SCN9A-206ENST00000472119 PYY3Q5JQD4 70 aa4.07□□□□□ -1.76
SCN9A-206ENST00000472119 C14orf144Q96I85 54 aa4.07□□□□□ -1.76
SCN9A-206ENST00000472119 ABCA13Q86UQ4 5058 aa4.07□□□□□ -1.76
SCN9A-206ENST00000472119 TRBV10-3A0A0K0K1G6 114 aa4.06□□□□□ -1.76
SCN9A-206ENST00000472119 BCE1O60756 84 aa4.06□□□□□ -1.76
SCN9A-206ENST00000472119 NDUFC2O95298 119 aa4.06□□□□□ -1.76
SCN9A-206ENST00000472119 LINC01547P58512 204 aaPredicted RBP4.06□□□□□ -1.76
SCN9A-206ENST00000472119 SPINK6Q6UWN8 80 aa4.06□□□□□ -1.76
SCN9A-206ENST00000472119 VAMP8Q9BV40 100 aa4.06□□□□□ -1.76
SCN9A-206ENST00000472119 SPANXDQ9BXN6 97 aa4.06□□□□□ -1.76
SCN9A-206ENST00000472119 TMEM126AQ9H061 195 aa4.06□□□□□ -1.76
SCN9A-206ENST00000472119 SPANXCQ9NY87 97 aa4.06□□□□□ -1.76
SCN9A-206ENST00000472119 TRBV10-2A0A0K0K1G8 114 aa4.05□□□□□ -1.76
SCN9A-206ENST00000472119 ZNF861PO60384 105 aa4.05□□□□□ -1.76
SCN9A-206ENST00000472119 COX8AP10176 69 aa4.05□□□□□ -1.76
SCN9A-206ENST00000472119 REG3GQ6UW15 175 aa4.05□□□□□ -1.76
SCN9A-206ENST00000472119 MUSTN1Q8IVN3 82 aa4.05□□□□□ -1.76
SCN9A-206ENST00000472119 SPANXB1Q9NS25 103 aaPredicted RBP4.05□□□□□ -1.76
SCN9A-206ENST00000472119 MYCBP2O75592 4640 aa4.04□□□□□ -1.76
SCN9A-206ENST00000472119 IFITM1P13164 125 aa4.04□□□□□ -1.76
SCN9A-206ENST00000472119 DDTP30046 118 aa4.04□□□□□ -1.76
SCN9A-206ENST00000472119 UBE2AP49459 152 aa4.04□□□□□ -1.76
SCN9A-206ENST00000472119 PRLHP81277 87 aa4.04□□□□□ -1.76
SCN9A-206ENST00000472119 S100A7L2Q5SY68 101 aa4.04□□□□□ -1.76
SCN9A-206ENST00000472119 Q6ZVH6 145 aa4.04□□□□□ -1.76
SCN9A-206ENST00000472119 FAM19A1Q7Z5A9 133 aa4.04□□□□□ -1.76
SCN9A-206ENST00000472119 OR13C6PQ8NH95 151 aa4.04□□□□□ -1.76
SCN9A-206ENST00000472119 DIRC1Q969H9 104 aa4.04□□□□□ -1.76
SCN9A-206ENST00000472119 KCNQ1DNQ9H478 68 aa4.04□□□□□ -1.76
SCN9A-206ENST00000472119 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
SCN9A-206ENST00000472119 H0Y9J4 135 aa4.03□□□□□ -1.76
SCN9A-206ENST00000472119 DLEU1O43261 78 aa4.03□□□□□ -1.76
SCN9A-206ENST00000472119 IGLV6-57P01721 117 aa4.03□□□□□ -1.76
SCN9A-206ENST00000472119 RPL28P46779 137 aaKnown RBP4.03□□□□□ -1.76
SCN9A-206ENST00000472119 LINC00337Q8N6G1 96 aa4.03□□□□□ -1.76
SCN9A-206ENST00000472119 LRP1Q07954 4544 aaKnown RBP4.03□□□□□ -1.76
SCN9A-206ENST00000472119 OXTP01178 125 aa4.02□□□□□ -1.77
SCN9A-206ENST00000472119 S100A12P80511 92 aa4.02□□□□□ -1.77
SCN9A-206ENST00000472119 SLC25A34Q6PIV7 304 aa4.02□□□□□ -1.77
SCN9A-206ENST00000472119 KRTAP13-1Q8IUC0 172 aa4.02□□□□□ -1.77
SCN9A-206ENST00000472119 LINC00518Q8N0U6 118 aa4.02□□□□□ -1.77
SCN9A-206ENST00000472119 COPS9Q8WXC6 57 aa4.02□□□□□ -1.77
SCN9A-206ENST00000472119 HIST1H4GQ99525 98 aa4.02□□□□□ -1.77
SCN9A-206ENST00000472119 TRAV23DV6A0A075B6W5 121 aa4.01□□□□□ -1.77
SCN9A-206ENST00000472119 ETDCA0A1B0GVM5 59 aa4.01□□□□□ -1.77
SCN9A-206ENST00000472119 A4D1N5 150 aa4.01□□□□□ -1.77
SCN9A-206ENST00000472119 A6NDN8 102 aa4.01□□□□□ -1.77
SCN9A-206ENST00000472119 KRTAP4-16G5E9R7 235 aaPredicted RBP4.01□□□□□ -1.77
SCN9A-206ENST00000472119 SPRR1AP35321 89 aa4.01□□□□□ -1.77
SCN9A-206ENST00000472119 C2orf91Q6ZV80 131 aa4.01□□□□□ -1.77
SCN9A-206ENST00000472119 HIGD2AQ9BW72 106 aa4.01□□□□□ -1.77
SCN9A-206ENST00000472119 FAT3Q8TDW7 4589 aa4□□□□□ -1.77
SCN9A-206ENST00000472119 ZNF73O43830 326 aaPredicted RBP4□□□□□ -1.77
SCN9A-206ENST00000472119 LINC01600Q96MT4 127 aa4□□□□□ -1.77
SCN9A-206ENST00000472119 C12orf57Q99622 126 aa4□□□□□ -1.77
SCN9A-206ENST00000472119 PPDPFQ9H3Y8 114 aa4□□□□□ -1.77
SCN9A-206ENST00000472119 ANAPC11Q9NYG5 84 aa4□□□□□ -1.77
SCN9A-206ENST00000472119 HIGD1BQ9P298 99 aa4□□□□□ -1.77
SCN9A-206ENST00000472119 DMBT1Q9UGM3 2413 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms