RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 MYMXA0A1B0GTQ4 84 aa4.51□□□□□ -1.69
USP48-207ENST00000471752 ETDCA0A1B0GVM5 59 aa4.51□□□□□ -1.69
USP48-207ENST00000471752 COLCA2A8K830 154 aa4.51□□□□□ -1.69
USP48-207ENST00000471752 J3QQQ9 107 aa4.51□□□□□ -1.69
USP48-207ENST00000471752 HSBP1O75506 76 aa4.51□□□□□ -1.69
USP48-207ENST00000471752 ARL17AQ8IVW1 177 aa4.51□□□□□ -1.69
USP48-207ENST00000471752 LEPROTL1O95214 131 aa4.5□□□□□ -1.69
USP48-207ENST00000471752 DDTP30046 118 aa4.5□□□□□ -1.69
USP48-207ENST00000471752 HERV-K104P63124 156 aa4.5□□□□□ -1.69
USP48-207ENST00000471752 MOBPQ13875 183 aa4.5□□□□□ -1.69
USP48-207ENST00000471752 SFTA2Q6UW10 78 aa4.5□□□□□ -1.69
USP48-207ENST00000471752 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
USP48-207ENST00000471752 IGLV6-57P01721 117 aa4.49□□□□□ -1.69
USP48-207ENST00000471752 NDUFA5Q16718 116 aa4.49□□□□□ -1.69
USP48-207ENST00000471752 SPAG11AQ6PDA7 123 aa4.49□□□□□ -1.69
USP48-207ENST00000471752 Q8N377 158 aa4.49□□□□□ -1.69
USP48-207ENST00000471752 TTTY13Q9BZ97 58 aa4.49□□□□□ -1.69
USP48-207ENST00000471752 A0A0J9YXY3 114 aa4.48□□□□□ -1.69
USP48-207ENST00000471752 DPM2O94777 84 aa4.48□□□□□ -1.69
USP48-207ENST00000471752 LITAFQ99732 161 aa4.48□□□□□ -1.69
USP48-207ENST00000471752 A0A0U1RQV1 116 aa4.47□□□□□ -1.69
USP48-207ENST00000471752 IGKCP01834 107 aa4.47□□□□□ -1.69
USP48-207ENST00000471752 ASB16-AS1Q495Z4 193 aa4.47□□□□□ -1.69
USP48-207ENST00000471752 Q6ZRX8 168 aa4.47□□□□□ -1.69
USP48-207ENST00000471752 ZNF706Q9Y5V0 76 aaPredicted RBP4.47□□□□□ -1.69
USP48-207ENST00000471752 TRBV10-2A0A0K0K1G8 114 aa4.46□□□□□ -1.7
USP48-207ENST00000471752 SPINK1P00995 79 aa4.46□□□□□ -1.7
USP48-207ENST00000471752 CTAG1AP78358 180 aa4.46□□□□□ -1.7
USP48-207ENST00000471752 FP248Q71RG6 208 aaPredicted RBP4.46□□□□□ -1.7
USP48-207ENST00000471752 FSIP2Q5CZC0 6907 aa4.45□□□□□ -1.7
USP48-207ENST00000471752 A0A0G2JQZ4 141 aa4.45□□□□□ -1.7
USP48-207ENST00000471752 LGALS3P17931 250 aaKnown RBP4.45□□□□□ -1.7
USP48-207ENST00000471752 PLNP26678 52 aa4.45□□□□□ -1.7
USP48-207ENST00000471752 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
USP48-207ENST00000471752 HRCT1Q6UXD1 115 aa4.45□□□□□ -1.7
USP48-207ENST00000471752 SSBP3-AS1Q7Z2R9 100 aa4.45□□□□□ -1.7
USP48-207ENST00000471752 MAP1LC3CQ9BXW4 147 aa4.45□□□□□ -1.7
USP48-207ENST00000471752 SPANXB1Q9NS25 103 aaPredicted RBP4.45□□□□□ -1.7
USP48-207ENST00000471752 TRAV23DV6A0A075B6W5 121 aa4.44□□□□□ -1.7
USP48-207ENST00000471752 LINC00587B1AMM8 73 aa4.44□□□□□ -1.7
USP48-207ENST00000471752 ZNF73O43830 326 aaPredicted RBP4.44□□□□□ -1.7
USP48-207ENST00000471752 NDUFC2O95298 119 aa4.44□□□□□ -1.7
USP48-207ENST00000471752 S100A7L2Q5SY68 101 aa4.44□□□□□ -1.7
USP48-207ENST00000471752 LINC00308Q8TCZ7 52 aa4.44□□□□□ -1.7
USP48-207ENST00000471752 E9PLD3 99 aa4.43□□□□□ -1.7
USP48-207ENST00000471752 HIST1H2BKO60814 126 aa4.43□□□□□ -1.7
USP48-207ENST00000471752 HIST1H2BJP06899 126 aa4.43□□□□□ -1.7
USP48-207ENST00000471752 HIST1H2BOP23527 126 aa4.43□□□□□ -1.7
USP48-207ENST00000471752 HIST1H2BBP33778 126 aa4.43□□□□□ -1.7
USP48-207ENST00000471752 NMUP48645 174 aa4.43□□□□□ -1.7
USP48-207ENST00000471752 HIST1H2BDP58876 126 aa4.43□□□□□ -1.7
USP48-207ENST00000471752 HIST1H2BCP62807 126 aa4.43□□□□□ -1.7
USP48-207ENST00000471752 HIST2H2BEQ16778 126 aa4.43□□□□□ -1.7
USP48-207ENST00000471752 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.43□□□□□ -1.7
USP48-207ENST00000471752 HIST1H2BHQ93079 126 aa4.43□□□□□ -1.7
USP48-207ENST00000471752 HIST1H2BNQ99877 126 aa4.43□□□□□ -1.7
USP48-207ENST00000471752 HIST1H2BMQ99879 126 aa4.43□□□□□ -1.7
USP48-207ENST00000471752 HSPB8Q9UJY1 196 aa4.43□□□□□ -1.7
USP48-207ENST00000471752 SYS1-DBNDD2H3BUS1 97 aa4.42□□□□□ -1.7
USP48-207ENST00000471752 C9orf153Q5TBE3 101 aa4.42□□□□□ -1.7
USP48-207ENST00000471752 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
USP48-207ENST00000471752 C9orf92A6NGG3 77 aa4.41□□□□□ -1.7
USP48-207ENST00000471752 HERVK_113P61574 105 aa4.41□□□□□ -1.7
USP48-207ENST00000471752 OR13C6PQ8NH95 151 aa4.41□□□□□ -1.7
USP48-207ENST00000471752 SLC25A20O43772 301 aa4.4□□□□□ -1.71
USP48-207ENST00000471752 LINC01545Q5VT33 79 aa4.4□□□□□ -1.71
USP48-207ENST00000471752 MIEN1Q9BRT3 115 aa4.4□□□□□ -1.71
USP48-207ENST00000471752 H7C2G1 150 aa4.39□□□□□ -1.71
USP48-207ENST00000471752 C3orf79P0CE67 100 aa4.39□□□□□ -1.71
USP48-207ENST00000471752 SPRR1BP22528 89 aa4.39□□□□□ -1.71
USP48-207ENST00000471752 SEC61BP60468 96 aaKnown RBP4.39□□□□□ -1.71
USP48-207ENST00000471752 RPS29P62273 56 aaKnown RBP4.39□□□□□ -1.71
USP48-207ENST00000471752 Q1RN00 199 aa4.39□□□□□ -1.71
USP48-207ENST00000471752 ANKRD39Q53RE8 183 aa4.39□□□□□ -1.71
USP48-207ENST00000471752 PCOTHQ58A44 107 aa4.39□□□□□ -1.71
USP48-207ENST00000471752 SMIM29Q86T20 159 aa4.39□□□□□ -1.71
USP48-207ENST00000471752 DEFB105AQ8NG35 78 aa4.39□□□□□ -1.71
USP48-207ENST00000471752 ZNF815PA8K554 130 aa4.38□□□□□ -1.71
USP48-207ENST00000471752 LINC01547P58512 204 aaPredicted RBP4.38□□□□□ -1.71
USP48-207ENST00000471752 S100A12P80511 92 aa4.38□□□□□ -1.71
USP48-207ENST00000471752 C6orf99Q4VX62 202 aa4.38□□□□□ -1.71
USP48-207ENST00000471752 SPANXCQ9NY87 97 aa4.38□□□□□ -1.71
USP48-207ENST00000471752 JOSD1Q15040 202 aaPredicted RBP4.37□□□□□ -1.71
USP48-207ENST00000471752 ATOH7Q8N100 152 aa4.37□□□□□ -1.71
USP48-207ENST00000471752 TIMM17BO60830 172 aa4.36□□□□□ -1.71
USP48-207ENST00000471752 COX7BP24311 80 aa4.36□□□□□ -1.71
USP48-207ENST00000471752 ELOF1P60002 83 aaKnown RBP4.36□□□□□ -1.71
USP48-207ENST00000471752 MT1HP80294 61 aa4.36□□□□□ -1.71
USP48-207ENST00000471752 PET117Q6UWS5 81 aa4.36□□□□□ -1.71
USP48-207ENST00000471752 PCP2Q8IVA1 136 aa4.36□□□□□ -1.71
USP48-207ENST00000471752 KRTDAPP60985 99 aa4.35□□□□□ -1.71
USP48-207ENST00000471752 MUSTN1Q8IVN3 82 aa4.35□□□□□ -1.71
USP48-207ENST00000471752 SPANXDQ9BXN6 97 aa4.35□□□□□ -1.71
USP48-207ENST00000471752 IGLV8-61A0A075B6I0 122 aa4.34□□□□□ -1.71
USP48-207ENST00000471752 TAL2Q16559 108 aa4.34□□□□□ -1.71
USP48-207ENST00000471752 C1orf195Q5TG92 126 aa4.34□□□□□ -1.71
USP48-207ENST00000471752 LINC00518Q8N0U6 118 aa4.34□□□□□ -1.71
USP48-207ENST00000471752 DHRS4-AS1Q9P1J3 65 aa4.34□□□□□ -1.71
USP48-207ENST00000471752 LAMTOR3Q9UHA4 124 aa4.33□□□□□ -1.72
USP48-207ENST00000471752 C5orf52A6NGY3 159 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms