RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 PPP1R2P9O14990 202 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 ATP5LO75964 103 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 S100A9P06702 114 aaKnown RBP0.72□□□□□ -2.29
CLIP4-209ENST00000471165 ATP6V0CP27449 155 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 IFI27P40305 119 aaPredicted RBP0.72□□□□□ -2.29
CLIP4-209ENST00000471165 SPINK7P58062 85 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 S100A12P80511 92 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 H1FX-AS1Q4G0G2 97 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 TEX43Q6ZNM6 134 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 TMEM136Q6ZRR5 245 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 KRTAP19-3Q7Z4W3 81 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 BOD1L2Q8IYS8 172 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 TOMM5Q8N4H5 51 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 TMEM141Q96I45 108 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 C2orf88Q9BSF0 95 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 VCX2Q9H322 139 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 ERG28Q9UKR5 140 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 A0A1B0GWB2 263 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 H0YAA0 97 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 TCAPO15273 167 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 SERF1AO75920 110 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 SPINK8P0C7L1 97 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 RAB4AP20338 218 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 SPRR1BP22528 89 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 RPL35P42766 123 aaKnown RBP0.71□□□□□ -2.3
CLIP4-209ENST00000471165 NDUFA6P56556 154 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 LINC00158P58513 81 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 HERVK_113P63121 156 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 IL15RAQ13261 267 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 ZNF345Q14585 488 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 JOSD1Q15040 202 aaPredicted RBP0.71□□□□□ -2.3
CLIP4-209ENST00000471165 ZNF726P1Q15940 193 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 TAL2Q16559 108 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 C5orf47Q569G3 176 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 PYDC2Q56P42 97 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 PDZD11Q5EBL8 140 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 LCA10Q71F78 164 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 AMN1Q8IY45 258 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 TNFSF18Q9UNG2 199 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 HSPB11Q9Y547 144 aa0.71□□□□□ -2.3
CLIP4-209ENST00000471165 SYNE1Q8NF91 8797 aaKnown RBP0.7□□□□□ -2.3
CLIP4-209ENST00000471165 A0A1B0GV50 99 aa0.7□□□□□ -2.3
CLIP4-209ENST00000471165 ATP6V1G2O95670 118 aa0.7□□□□□ -2.3
CLIP4-209ENST00000471165 MBP02144 154 aa0.7□□□□□ -2.3
CLIP4-209ENST00000471165 DDTP30046 118 aa0.7□□□□□ -2.3
CLIP4-209ENST00000471165 KLKP1Q107X0 134 aa0.7□□□□□ -2.3
CLIP4-209ENST00000471165 CENPWQ5EE01 88 aa0.7□□□□□ -2.3
CLIP4-209ENST00000471165 RPL7L1Q6DKI1 246 aaKnown RBP0.7□□□□□ -2.3
CLIP4-209ENST00000471165 LINC00299Q6ZSB3 139 aa0.7□□□□□ -2.3
CLIP4-209ENST00000471165 TCEAL7Q9BRU2 100 aa0.7□□□□□ -2.3
CLIP4-209ENST00000471165 CNFNQ9BYD5 112 aa0.7□□□□□ -2.3
CLIP4-209ENST00000471165 CTXND1A0A1B0GTU2 59 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 MAP1LC3B2A6NCE7 125 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 C5orf52A6NGY3 159 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 LST1O00453 97 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 ATP6V1G1O75348 118 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 PPP1R17O96001 155 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 GNG4P50150 75 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 HERVK_113P61574 105 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 SEC11AP67812 179 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 COX17Q14061 63 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 PMVKQ15126 192 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 ENKURQ8TC29 256 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 PLAC4Q8WY50 150 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 AMELXQ99217 191 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 SMIM2Q9BVW6 85 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 MAP1LC3BQ9GZQ8 125 aa0.69□□□□□ -2.3
CLIP4-209ENST00000471165 BORCS7-ASMTA0A0B4J1R7 106 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 TRBV7-7A0A0K0K1E9 115 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 TEX49A0A1B0GTD5 131 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 COLCA2A8K830 154 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 ZNF73O43830 326 aaPredicted RBP0.68□□□□□ -2.3
CLIP4-209ENST00000471165 PFDN1O60925 122 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 MT1EP04732 61 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 MT1GP13640 62 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 CKS2P33552 79 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 LINC00313P59037 77 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 SERF2P84101 59 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 MRPL51Q4U2R6 128 aaKnown RBP0.68□□□□□ -2.3
CLIP4-209ENST00000471165 S100A7L2Q5SY68 101 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 FA2HQ7L5A8 372 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 PRR15Q8IV56 129 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 BORCS7Q96B45 105 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 C20orf78Q9BR46 151 aa0.68□□□□□ -2.3
CLIP4-209ENST00000471165 PSMG3Q9BT73 122 aaPredicted RBP0.68□□□□□ -2.3
CLIP4-209ENST00000471165 NXT2Q9NPJ8 142 aaKnown RBP0.68□□□□□ -2.3
CLIP4-209ENST00000471165 TRAV23DV6A0A075B6W5 121 aa0.67□□□□□ -2.3
CLIP4-209ENST00000471165 A0A1B0GUT8 65 aa0.67□□□□□ -2.3
CLIP4-209ENST00000471165 TINCRA0A1B0GVN0 87 aa0.67□□□□□ -2.3
CLIP4-209ENST00000471165 NAP1L6A6NFF2 107 aa0.67□□□□□ -2.3
CLIP4-209ENST00000471165 GATCO43716 136 aaKnown RBP0.67□□□□□ -2.3
CLIP4-209ENST00000471165 SMIM13P0DJ93 91 aa0.67□□□□□ -2.3
CLIP4-209ENST00000471165 PDE6GP18545 87 aa0.67□□□□□ -2.3
CLIP4-209ENST00000471165 HINT1P49773 126 aaPredicted RBP0.67□□□□□ -2.3
CLIP4-209ENST00000471165 RPL23P62829 140 aaKnown RBP0.67□□□□□ -2.3
CLIP4-209ENST00000471165 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
CLIP4-209ENST00000471165 AKR1C8PQ5T2L2 129 aa0.67□□□□□ -2.3
CLIP4-209ENST00000471165 Q5W150 140 aa0.67□□□□□ -2.3
CLIP4-209ENST00000471165 MT1MQ8N339 61 aa0.67□□□□□ -2.3
CLIP4-209ENST00000471165 KCNRGQ8N5I3 272 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms